EY753747

Overview
NameEY753747
Unique NameEY753747
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753747 vs. ExPASy Swiss-Prot
Match: QORL_ARATH (Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 1.160e-76
Identity = 120/169 (71.01%), Postives = 135/169 (79.88%), Query Frame = 1
Query:   82 TKVGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTXXXXXXXXXXXXXXXXXKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTGFSAGKSILVLNGSG 588
            T   ++P EMKAW+Y +YGGVDVLK +  + VP++KEDQVLIKVVAAALNPVD KRRQGKFKATDSPLPT                 K+ KEGDEVY +++EKALEGPKQFGSLAEYTAVEE+LLA KPKN+DF QAAGLPLAIETA EGL RT FSAGKSILVLNG+G
Sbjct:   69 TADASIPKEMKAWVYSDYGGVDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPLPTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLLALKPKNIDFAQAAGLPLAIETADEGLVRTEFSAGKSILVLNGAG 237          

HSP 2 Score: 70.0922 bits (170), Expect = 1.160e-76
Identity = 41/89 (46.07%), Postives = 56/89 (62.92%), Query Frame = 3
Query:  684 RVLGADLAIDYTKDNFEDLPEKFDLXYDAIGQCDRAVKPSKKGAP-W*LYWALVHXWLKICCTST-EKF*RTNSFLEAGRGSP-SKPKG 941
            R LGADLAIDYTK+N EDLP+K+D+ +DAIG CD+AVK  K+G     L  A+     +   TS  +   + N ++E+G+  P   PKG
Sbjct:  269 RSLGADLAIDYTKENIEDLPDKYDVVFDAIGMCDKAVKVIKEGGKVVALTGAVTPPGFRFVVTSNGDVLKKLNPYIESGKVKPVVDPKG 357          
BLAST of EY753747 vs. ExPASy Swiss-Prot
Match: QORH_SPIOL (Quinone-oxidoreductase homolog, chloroplastic OS=Spinacia oleracea GN=QOR PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.267e-13
Identity = 53/168 (31.55%), Postives = 75/168 (44.64%), Query Frame = 1
Query:  109 MKAWLYGEYGG-VDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKAT-DSPLPTXXXXXXXXXXXXXXXXXKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLER------TGFSAGKSILVLNGSG 588
            M A  Y  YGG  D LK  E V VP  K D++L+K+ AA LNP+D K ++G  +       PT                   FK GD+V   ++          G+LAEY   +E L   +P  +   + A LP+A  TA++ L +       G    K+IL+   SG
Sbjct:    6 MHAIQYSGYGGGTDALKHVE-VAVPDPKSDELLLKIEAATLNPIDWKIQKGVLRPLLPRKFPTIPGTDVAGEVVQAGSAVNRFKTGDKVVAVLSHAT------GGALAEYAVAKENLTVARPPEVSAAEGAALPVAALTAHQALTQFANIKLDGSGERKNILITAASG 166          

HSP 2 Score: 27.7202 bits (60), Expect = 2.267e-13
Identity = 14/29 (48.28%), Postives = 18/29 (62.07%), Query Frame = 2
Query:  608 IQLAKQVFGASRVAATSSTRNLEFLKSFG 694
            +QLAK   G + V AT   RNL+F+K  G
Sbjct:  173 VQLAK--LGNTHVTATCGARNLDFVKGLG 199          
BLAST of EY753747 vs. ExPASy Swiss-Prot
Match: RT4I1_BOVIN (Reticulon-4-interacting protein 1, mitochondrial OS=Bos taurus GN=RTN4IP1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.928e-13
Identity = 52/181 (28.73%), Postives = 83/181 (45.86%), Query Frame = 1
Query:  109 MKAWLYGEYGGVDVLKFDEKVTVPQVK-EDQVLIKVVAAALNPVDGKRRQG---------------KFKATDSPLPTXXXXXXXXXXXXXXXXXKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTG-----FSAGKSILVLNGSG 588
            M AW+  +YG  +VL+F + + +P +   ++V+IKV AA++NP+D   R G               K K  + PL                   + FK GDEV+  +       P + G+L+E+  V    ++ KP++L   QAA LP    TA+  + + G        GK +L+L  SG
Sbjct:   43 MPAWVIDKYGSNEVLRFTQNMMIPMIHYPNEVIIKVHAASINPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDV--RYFKPGDEVWAAVP------PWKQGTLSEFVVVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVGGLNDRNCTGKRVLILGASG 215          

HSP 2 Score: 23.483 bits (49), Expect = 2.928e-13
Identity = 14/34 (41.18%), Postives = 16/34 (47.06%), Query Frame = 3
Query:  684 RVLGADLAIDYTKDNFE---DLPEKFDLXYDAIG 776
            R LGAD  IDY   N E      + FD   D +G
Sbjct:  245 RKLGADDVIDYKSGNVEAQLKSSKPFDFILDNVG 278          
BLAST of EY753747 vs. ExPASy Swiss-Prot
Match: RT4I1_DANRE (Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Danio rerio GN=rtn4ip1 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.670e-13
Identity = 59/179 (32.96%), Postives = 84/179 (46.93%), Query Frame = 1
Query:  109 MKAWLYGEYGGVDVLKFDEKVTVPQVK-EDQVLIKVVAAALNPVDGKRRQGKFKATDS----PL---------PTXXXXXXXXXXXXXXXXXKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTG-----FSAGKSILVLNGSG 588
            M AW+  +YG  DVL+F +   +P +   ++V++KV AA LNP+D   R G   AT +    PL         P                  K FK GD+V+  I       P + GSLAE+  V    ++ KPK+L   +AA +P    TA+  +  TG      SA K +L+L GSG
Sbjct:   29 MPAWVIDKYGKNDVLRFTKNAALPIIHYPNEVVVKVHAAGLNPIDISMRGGYGAATMAMKRDPLNISQSGGEFPLILGRDVSGEIMECGLDVKYFKPGDQVWAAIP------PWKQGSLAEFVVVSGNEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLNKDNSAKKRVLILGGSG 201          
BLAST of EY753747 vs. ExPASy Swiss-Prot
Match: RT4I1_HUMAN (Reticulon-4-interacting protein 1, mitochondrial OS=Homo sapiens GN=RTN4IP1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.405e-12
Identity = 53/181 (29.28%), Postives = 83/181 (45.86%), Query Frame = 1
Query:  109 MKAWLYGEYGGVDVLKFDEKVTVPQVK-EDQVLIKVVAAALNPVDGKRRQG---------------KFKATDSPLPTXXXXXXXXXXXXXXXXXKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTG-----FSAGKSILVLNGSG 588
            M AW+  +YG  +VL+F + + +P +   ++V++KV AA++NP+D   R G               K K  + PL                   K FK GDEV+  +       P + G+L+E+  V    ++ KPK+L   QAA LP    TA+  + + G        GK +L+L  SG
Sbjct:   43 MPAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDV--KYFKPGDEVWAAVP------PWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASG 215          

HSP 2 Score: 22.3274 bits (46), Expect = 1.405e-12
Identity = 13/34 (38.24%), Postives = 17/34 (50.00%), Query Frame = 3
Query:  684 RVLGADLAIDYTKDNFEDLPEK---FDLXYDAIG 776
            R LGAD  IDY   + E+  +    FD   D +G
Sbjct:  245 RKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVG 278          
BLAST of EY753747 vs. ExPASy Swiss-Prot
Match: RT4I1_MOUSE (Reticulon-4-interacting protein 1, mitochondrial OS=Mus musculus GN=Rtn4ip1 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.405e-12
Identity = 51/179 (28.49%), Postives = 80/179 (44.69%), Query Frame = 1
Query:  109 MKAWLYGEYGGVDVLKFDEKVTVPQVK-EDQVLIKVVAAALNPVDGKRRQG-------------KFKATDSPLPTXXXXXXXXXXXXXXXXXKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTGFSA-----GKSILVLNGSG 588
            M AW+  +YG  +VL+F + + +P +   ++V+IKV AA++NP+D   R G               K      P                  K F+ GDEV+  +       P + G+L+E+  V    ++ KPK+L   QAA LP    TA+  + + G  +     GK  L+L  SG
Sbjct:   43 MPAWVIDKYGKNEVLRFTQNMMLPIIHYPNEVIIKVHAASVNPIDVNMRSGYGATALNMKRDPLHMKTKGEEFPLTLGRDVSGVVMECGLDVKYFQPGDEVWAAVP------PWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLSDKNCKGKRALILGASG 215          

HSP 2 Score: 24.2534 bits (51), Expect = 1.405e-12
Identity = 14/34 (41.18%), Postives = 18/34 (52.94%), Query Frame = 3
Query:  684 RVLGADLAIDYTKDNFEDLPEK---FDLXYDAIG 776
            R LGAD  IDYT  + E+  +    FD   D +G
Sbjct:  245 RKLGADEVIDYTLGSVEEQLKSLKLFDFILDNVG 278          
BLAST of EY753747 vs. ExPASy Swiss-Prot
Match: QORH_ARATH (Putative quinone-oxidoreductase homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g13010 PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 1.612e-11
Identity = 51/167 (30.54%), Postives = 73/167 (43.71%), Query Frame = 1
Query:  109 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKA-TDSPLPTXXXXXXXXXXXXXXXXXKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYE------GLERTGFSAGKSILVLNGSG 588
            M A  Y  YGG        +V VP  K ++V +K+ A +LNPVD K ++G  +       P                  K FK GD+V   ++   L G    G LAE+    E+L   +P+ +   +AA LP+A  TA +      GL+  G     +ILV   SG
Sbjct:    6 MHALQYNSYGGGAAGLEHVQVPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRPFLPRKFPCIPATDVAGEVVEVGSGVKNFKAGDKVVAVLSH--LGG----GGLAEFAVATEKLTVKRPQEVGAAEAAALPVAGLTALQALTNPAGLKLDGTGKKANILVTAASG 166          

HSP 2 Score: 27.335 bits (59), Expect = 1.612e-11
Identity = 14/29 (48.28%), Postives = 18/29 (62.07%), Query Frame = 2
Query:  608 IQLAKQVFGASRVAATSSTRNLEFLKSFG 694
            +QLAK     + V AT   RN+EF+KS G
Sbjct:  173 VQLAK--LANAHVTATCGARNIEFVKSLG 199          

HSP 3 Score: 22.3274 bits (46), Expect = 1.612e-11
Identity = 11/35 (31.43%), Postives = 14/35 (40.00%), Query Frame = 3
Query:  690 LGADLAIDYTKDNFEDLPEKFDLXYDAIGQCDRAV 794
            LGAD  +DY       L       YDA+  C   +
Sbjct:  198 LGADEVLDYKTPEGAALKSPSGKKYDAVVHCANGI 232          
The following BLAST results are available for this feature:
BLAST of EY753747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
QORL_ARATH1.160e-7671.01Quinone oxidoreductase-like protein At1g23740, chl... [more]
QORH_SPIOL2.267e-1331.55Quinone-oxidoreductase homolog, chloroplastic OS=S... [more]
RT4I1_BOVIN2.928e-1328.73Reticulon-4-interacting protein 1, mitochondrial O... [more]
RT4I1_DANRE8.670e-1332.96Reticulon-4-interacting protein 1 homolog, mitocho... [more]
RT4I1_HUMAN1.405e-1229.28Reticulon-4-interacting protein 1, mitochondrial O... [more]
RT4I1_MOUSE1.405e-1228.49Reticulon-4-interacting protein 1, mitochondrial O... [more]
QORH_ARATH1.612e-1130.54Putative quinone-oxidoreductase homolog, chloropla... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-006-D10-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753747 ID=EY753747; Name=EY753747; organism=Citrus sinensis; type=EST; length=951bp
CAAGGCTCATTTTCTTACCTTCCTCTTGGAGTTCAAGCAAGTGCATCACA
AGCTGCAGCATCGTCCACTGAGGCTGAGCCCACTAAAGTGGGAACTGTTC
CAAGCGAGATGAAGGCTTGGCTGTATGGGGAATATGGGGGCGTTGATGTT
TTGAAGTTCGACGAGAAAGTGACAGTGCCTCAAGTGAAGGAGGATCAAGT
GTTGATCAAAGTTGTCGCTGCTGCCCTTAATCCTGTTGATGGGAAGAGAA
GGCAGGGCAAGTTCAAGGCCACTGATTCTCCTCTCCCGACTGTTCCAGGC
TATGATGTTGCTGGTGTAGTGGTAAAGGTTGGCACTCAAGTGAAGGAATT
TAAGGAGGGGGATGAAGTATACGGGGACATAAATGAGAAAGCTTTGGAAG
GGCCCAAACAGTTTGGCTCTTTGGCGGAGTACACTGCGGTTGAAGAGAGG
TTACTGGCCCCAAAACCTAAGAATTTGGACTTTGTTCAGGCTGCTGGCCT
TCCGCTCGCTATCGAGACAGCCTATGAGGGTCTAGAAAGGACTGGTTTCT
CTGCTGGTAAATCTATTCTTGTTTTGAATGGTTCTGGGTGGTGTTGGAAG
CTTGGTTATTCAGCTGGCGAAACAAGTATTTGGTGCTTCAAGAGTTGCAG
CAACTTCGAGTACCAGGAACTTGGAGTTCTTGAAGAGTTTTGGGTGCTGA
TTTGGCTATTGATTACACCAAAGACAACTTTGAAGATTTGCCAGAAAAAT
TTGACTTANTCTATGATGCTATTGGGCAGTGTGATAGAGCAGTAAAGCCA
TCAAAGAAGGGGGCACCGTGGTAGCTCTACTGGGCGCTTGTACACTNCTG
GCTTAAAATTTGTTGCACTTCAACGGAAAAGTTTTGAAGAACTAATTCCT
TTTTGGAAGCGGGAAGGGGAAGCCCATCTAAACCCAAGGGACATTCCCTT
T
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