EY753732

Overview
NameEY753732
Unique NameEY753732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY753732 vs. ExPASy Swiss-Prot
Match: CIA2_ARATH (Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana GN=CIA2 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19
Identity = 46/51 (90.20%), Postives = 49/51 (96.08%), Query Frame = 3 
Query:   51 ARLAQIDLFSDGGLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 203
            ARLAQIDLF D G+REASVLRYKEKRRTRLFSKKIRYQVRK+NAD+RPRMK
Sbjct:  369 ARLAQIDLFGDSGMREASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMK 419
[Close]
BLAST of EY753732 vs. ExPASy Swiss-Prot
Match: COL16_ARATH (Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana GN=COL16 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.591e-11
Identity = 34/43 (79.07%), Postives = 39/43 (90.70%), Query Frame = 3 
Query:   75 FSDGGLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 203
            F DGG REA V RY+EKRRTRLFSKKIRY+VRK+NA++RPRMK
Sbjct:  356 FGDGG-REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMK 397
[Close]
BLAST of EY753732 vs. ExPASy Swiss-Prot
Match: COL7_ARATH (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana GN=COL7 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.845e-11
Identity = 32/39 (82.05%), Postives = 37/39 (94.87%), Query Frame = 3 
Query:   87 GLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 203
            G REA VLRYKEKRRTRLFSKKIRY+VRK+NA++RPR+K
Sbjct:  343 GEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIK 381
The following BLAST results are available for this feature:
BLAST of EY753732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CIA2_ARATH9.822e-1990.20Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidop... [more]
COL16_ARATH2.591e-1179.07Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsi... [more]
COL7_ARATH9.845e-1182.05Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-006-C04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753732 ID=EY753732; Name=EY753732; organism=Citrus sinensis; type=EST; length=906bp
ATTTTTTTTTTTTTTTTTTATTTTCCTTCTTTTCCCTAATTTTGGGGCAG
GCCAGGCTGGCGCAGATTGATTTGTTCTCCGACGGTGGATTGAGAGAGGC
TAGTGTGTTGCGCTACAAAGAAAAGCGGCGTACGCGCCTGTTCTCTAAGA
AGATCAGGTACCAAGTTAGAAAAGTCAACGCCGATCGTCGGCCCAGAATG
AAGGTATAAAATTGCACCCATGTTATCCCATTGCTTTGTTTACTTAACAG
TTGGGTTGTACTGTAATACCAGATGGGGTAATTAAAAATGACACGTGGCT
TGTTTTGAAGACTCGTTTAAATTTACCATTTTCTCTTCCCCCGCCGCACA
TTTTTTGGCCTTTTGTGATTTCTTTGGTCATTTGATTTGATGGCCTAAAA
TTTCACATGAAATATCTCAGGATTAGATCATTATCTGATCTCACACGTAT
TGAGTTACCACGTCAGGAAAACAGAACTCTGATGCAATTATATCTTCAAA
TTTGTCCAAGGTTTTGAATCTTTTTTTTCCATTATTGAAAAAAAAAAAAG
AAAAAGCTTTTTTTTTTTTTATGCAAGCTTTTTCTTGAATTAAAATGGTT
AATAAAAATTAATTTTGTTATTTAACTATAAACCATTGTTTAAAACATGT
GACATGTTTTTGTTTCTACTACAAATTGACTACCGAAGCATGATCTCACT
TCATTGCCGAAATTGAATTGGGTCAAGCCTAGTTAACAGCATTATCAATT
GAATCACTATTACCACTGGTTTCTTTTTCTTTTTTTTTTAGGGAAATAGT
TTTAATATATTCACTAAATATACTAATTTGTACAAATTAGATCGTTGACT
CCCTACCGCGAAGGGGAGTCTACATTTAAACTACAATTTGGTTAATTTTA
ACTAAG
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