EY753726

Overview
NameEY753726
Unique NameEY753726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753726 vs. ExPASy Swiss-Prot
Match: VP371_ARATH (Vacuolar protein-sorting-associated protein 37 homolog 1 OS=Arabidopsis thaliana GN=VPS37-1 PE=1 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 6.449e-67
Identity = 124/212 (58.49%), Postives = 155/212 (73.11%), Query Frame = 2
Query:  140 MFKFWGS-NEQQAQPRPQDVTSQS-WYXXXXXXXXXXXXATPSMSSFGSLNLQRPTEQSQPLSHVSPAEAAGIIALLKDKSVDELRKLLADKDAYRQFLLSIDQVKIQNNIRDELRRETLQIARDNLDKELRMIELXNQSKIIRTTELAAAXEKLHDLERQKEQLLKLYSPASLLKGIQEAMNKNREESENLHXQLLDRXVDIGGFCAKVQE 769
            MF FWGS ++QQ Q RPQ+ +SQS WY             +PS+ S  S +  RP    Q  + VSP EAAGII  LKDKSVDELRKLL+DKDAY+QFLLS+DQVK+QNNI+DELRRETLQ+ARDNL+KE +++EL NQ +IIRTTELA A EKL++LERQKE++LK YSP SLL  +QEAMN+  EESE L  + L++ +D   F  K ++
Sbjct:    1 MFNFWGSKDQQQGQSRPQEASSQSPWY-------------SPSLVS--SPSSSRPQSSGQISAQVSPGEAAGIIVFLKDKSVDELRKLLSDKDAYQQFLLSLDQVKVQNNIKDELRRETLQLARDNLEKEPQIMELRNQCRIIRTTELATAQEKLNELERQKEEILKFYSPGSLLHKLQEAMNQVDEESEALQEKFLEKEIDTAAFVQKYKK 197          

HSP 2 Score: 50.8322 bits (120), Expect = 6.449e-67
Identity = 23/25 (92.00%), Postives = 24/25 (96.00%), Query Frame = 3
Query:  747 AFVQKYKKLRTTYHRRALVHLFAKT 821
            AFVQKYKKLRTTYHRRAL+HL AKT
Sbjct:  190 AFVQKYKKLRTTYHRRALIHLAAKT 214          
BLAST of EY753726 vs. ExPASy Swiss-Prot
Match: VP372_ARATH (Vacuolar protein-sorting-associated protein 37 homolog 2 OS=Arabidopsis thaliana GN=VPS37-2 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 3.739e-61
Identity = 114/212 (53.77%), Postives = 150/212 (70.75%), Query Frame = 2
Query:  140 MFKFWGSNEQQ-AQPRPQ-DVTSQSWYXXXXXXXXXXXXATPSMSSFGSLNLQRPTEQSQPLSHVSPAEAAGIIALLKDKSVDELRKLLADKDAYRQFLLSIDQVKIQNNIRDELRRETLQIARDNLDKELRMIELXNQSKIIRTTELAAAXEKLHDLERQKEQLLKLYSPASLLKGIQEAMNKNREESENLHXQLLDRXVDIGGFCAKVQE 769
            MF FWGS EQQ  Q RP  + ++  WY             +PS+ +  S +  RP    Q  SHVSP EAAGIIA+LKDKSVDELRKLL+DKDAY+QFL S+DQV IQNNIR+ELR+ETL +AR+NL+KE +++EL NQ +IIRT+ELA A EKL++LE Q+E++LK YSP SLL  +Q+AMN+  EESE L  + +++ +D   F  K ++
Sbjct:    1 MFNFWGSKEQQQGQSRPSPEASATPWY-------------SPSLVT--SPSSSRPQTSGQIPSHVSPGEAAGIIAILKDKSVDELRKLLSDKDAYQQFLHSLDQVTIQNNIREELRKETLHLARENLEKEPQIVELRNQCRIIRTSELATAQEKLNELENQREEILKFYSPGSLLHRLQDAMNQVDEESEELQQKFMEKDIDTAAFVQKYKK 197          

HSP 2 Score: 48.1358 bits (113), Expect = 3.739e-61
Identity = 22/27 (81.48%), Postives = 24/27 (88.89%), Query Frame = 3
Query:  747 AFVQKYKKLRTTYHRRALVHLFAKTHS 827
            AFVQKYKKLR+ YHRRAL+HL AKT S
Sbjct:  190 AFVQKYKKLRSKYHRRALIHLAAKTSS 216          
The following BLAST results are available for this feature:
BLAST of EY753726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
VP371_ARATH6.449e-6758.49Vacuolar protein-sorting-associated protein 37 hom... [more]
VP372_ARATH3.739e-6153.77Vacuolar protein-sorting-associated protein 37 hom... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-006-B09-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753726 ID=EY753726; Name=EY753726; organism=Citrus sinensis; type=EST; length=869bp
CGATTGATATTTTCTTGAAGTTGATCAATCAAAGAAAACAATTGGCAAGA
GATACAAGAATTCGCGATCCACTCGTTCTGTTATTGCAATCTAGGGTTTA
TGTTCTTGGCCTGACCAAATAATCAGCCAATCCTGAGCTATGTTCAAGTT
CTGGGGTTCGAATGAGCAACAAGCTCAACCGCGTCCGCAAGATGTTACTT
CACAATCTTGGTACCCTCCATCTGTAGTCTCCCCAGATTCTTCCCGCCCT
GCTACGCCTAGTATGAGCTCTTTTGGCAGCTTAAATTTACAAAGGCCAAC
AGAACAGTCACAACCCCTATCACATGTTTCACCAGCTGAAGCTGCAGGCA
TTATTGCCCTCTTGAAGGACAAAAGTGTTGATGAGTTACGGAAGCTCTTG
GCGGATAAGGATGCATACCGCCAATTTTTACTCTCAATTGATCAAGTTAA
AATTCAAAACAATATAAGGGATGAACTTCGCAGGGAAACTTTGCAAATTG
CCAGGGACAACTTGGACAAGGAACTGCGCATGATTGAGCTTANAAACCAA
AGTAAAATTATTCGGACAACAGAATTGGCTGCTGCTCANGAGAAATTACA
CGATCTTGAGAGACAGAAAGAACAACTTTTGAAGTTGTACTCTCCTGCCT
CCCTTCTCAAAGGGATTCAAGAAGCTATGAATAAGAACCGAGAGGAATCT
GAAAACCTGCATANGCAGCTCCTTGATAGGGNAGTGGATATTGGGGGCTT
TTGTGCAAAAGTACAAGAAGCTGCGCACAACTTACCACCGTCGAGCGCTC
GTTCATCTTTTCGCCAAGACACACTCGNTGACGCAGGNAAGGCCTGAANT
AATGNATACATGATATATT
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