EY753554
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 324.324 bits (830), Expect = 5.331e-88 Identity = 146/185 (78.92%), Postives = 162/185 (87.57%), Query Frame = 2 Query: 113 QKSRSVAGATKASFXXXXXXXXXXXXATAGTRSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 QK+ S+ GATKASF A G+RSV+VSA AADP+RPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPE+L+WN Q+E+VH RWAMLGAAGIFIPE LTK+G+LNTPSWYTAGE EYFTDTTTLF++E++ IGWAEGRRWADIIKPGCVNTDPIFP +KLTGTDVGYPGGLWFDPL Sbjct: 21 QKNGSIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPL 205
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 2.096e-84 Identity = 142/185 (76.76%), Postives = 155/185 (83.78%), Query Frame = 2 Query: 113 QKSRSVAGATKASFXXXXXXXXXXXXATAGTRSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 +++ S+ G TKASF T RS + AADP+RPLWFPGSTPP WLDGSLPGDFGFDPLGL SDPE+LRWN Q+E+VHCRWAMLGAAGIFIPELLTK+GILNTPSWYTAGE EYFTDTTTLFIVE++ IGWAEGRRWADIIKPGCVNTDPIFP +KLTGTDVGYPGGLWFDPL Sbjct: 21 RRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPL 205
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.630e-45 Identity = 80/138 (57.97%), Postives = 99/138 (71.74%), Query Frame = 2 Query: 254 WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 W PG P +L GSLPGD GFDPLGL DPE LRW VQ+E+V+ RWAMLG AG+ +PE+ T +GI+N P WY AG+ EYF ++TLF++E I + E RRW DI PG VN DPIF Q+ L +VGYPGG+ F+PL Sbjct: 56 WLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGI-FNPL 192 HSP 2 Score: 28.4906 bits (62), Expect = 1.630e-45 Identity = 17/41 (41.46%), Postives = 20/41 (48.78%), Query Frame = 3 Query: 723 NGXLPMLAGMGAXVXHIYPGPGP---LTSHCSPG*SWHATV 836 NG L MLA +G + H G GP L H S WH T+ Sbjct: 207 NGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISD--PWHNTI 245
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.125e-45 Identity = 80/153 (52.29%), Postives = 105/153 (68.63%), Query Frame = 2 Query: 209 SVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 S S+ + + W PG P++L GSL GD GFDPLGL DPE L+W VQ+E+V+ RWAMLG AG+ +PE+ TK+GI+N P WY AG+ +YF ++TLF++E I + E RRW DI PG VN DPIF Q+ L +VGYPGG+ F+PL Sbjct: 42 SAKTSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGI-FNPL 193 HSP 2 Score: 28.8758 bits (63), Expect = 2.125e-45 Identity = 18/41 (43.90%), Postives = 20/41 (48.78%), Query Frame = 3 Query: 723 NGXLPMLAGMGAXVXHIYPGPGP---LTSHCSPG*SWHATV 836 NG L MLA +G V H G GP L H S WH T+ Sbjct: 208 NGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSD--PWHNTI 246
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 6.103e-35 Identity = 76/155 (49.03%), Postives = 95/155 (61.29%), Query Frame = 2 Query: 206 RSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWY-TAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 R V+V A + W PG P +LDGSL GD GFDPL L DPE LRW VQ+++V+ RWAMLG AG+ IPE+LTK G++N P W G+ YF ++T V M + E RRW DI PG VN DPIF + L + GYPG + F+PL Sbjct: 26 RDVAVQAKGS------WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVHMSST-YVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGRV-FNPL 172 HSP 2 Score: 27.335 bits (59), Expect = 6.103e-35 Identity = 17/41 (41.46%), Postives = 20/41 (48.78%), Query Frame = 3 Query: 723 NGXLPMLAGMGAXVXHIYPGPGP---LTSHCSPG*SWHATV 836 NG L MLA +G V H G GP L H + WH T+ Sbjct: 186 NGRLAMLAFLGFLVQHNVHGKGPFENLQQHLAD--PWHNTI 224
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.578e-26 Identity = 72/197 (36.55%), Postives = 100/197 (50.76%), Query Frame = 2 Query: 128 VAGATKASFXXXXXXXXXXXXATAGTRSVSVSAAAADPNRPLWFPGST------PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTA----GELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKL-------TGTDVGYPGGLWFDPL 667 ++G K+S + +R + V AAAA P + W P PEWLDGSLPGDFGFDPLGLG DP L+W ++E++H RWAML GIF+ + T + W+ A G + F+ TL +++ +GW E +RW D P + + P + TG + GYPGG +FDPL Sbjct: 19 LSGGKKSSQSLLFVNSKVGAGVSTTSRKLVVVAAAAAPKKS-WIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQAWTGI------PWFEAGADPGAVAPFS-FGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTG-EQGYPGGKFFDPL 206
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.880e-25 Identity = 73/178 (41.01%), Postives = 96/178 (53.93%), Query Frame = 2 Query: 203 TRSVSVSAAAADP------NRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETL------RWNVQSEIVHCRWAMLGAAGIFIPELLTKLGIL---NTPSWY------TAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTG--TDVGYPGGLWFDPL 667 +R V AAA P +RPLWF +LDGSLPGD+GFDPLGL SDPE RW E+++ R+AMLGA G PE L K+G++ +W+ AG Y+ D TLF++EM +G+AE RR+ D KPG + K G + YPGG +F+PL Sbjct: 35 SRKGLVRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPL 211
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.761e-25 Identity = 70/171 (40.94%), Postives = 90/171 (52.63%), Query Frame = 2 Query: 206 RSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETL------RWNVQSEIVHCRWAMLGAAGIFIPELLTKLGIL---NTPSWY------TAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTG--TDVGYPGGLWFDPL 667 R+ S NR LWF +LDG LPGDFGFDPLGL SDPE +W E+++ R+AMLGAAG PE+L K G++ +W+ AG Y+ D TLF++EM +G+AE RR+ D KPG + K G D YPGG F+PL Sbjct: 40 RAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPL 209
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.093e-24 Identity = 67/174 (38.51%), Postives = 91/174 (52.30%), Query Frame = 2 Query: 197 AGTRSVSVSAAAADPNRPLWFPGS------TPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTA----GELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHK-------LTGTDVGYPGGLWFDPL 667 A + +V AAAA + W P PEWLDGSLPGD+GFDPLGLG DP L+W ++E++H RWAM GIF+ + + + W+ A G + F+ TL ++I +GW E +RW D P + + P K TG + GYPGG +FDPL Sbjct: 39 ATPKRFTVLAAAAKKS---WIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAGADPGAIAPFS-FGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTG-EQGYPGGKFFDPL 201
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.580e-23 Identity = 65/167 (38.92%), Postives = 88/167 (52.69%), Query Frame = 2 Query: 218 VSAAAADPNRPLWFPGS------TPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTA----GELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHK-------LTGTDVGYPGGLWFDPL 667 V+AAA P + W P PEWLDGSLPGDFGFDPLGLG DP L+W ++E++H RWAM GIF+ + + + W+ A G + F+ +L +++ +GW E +RW D + D P K TG + GYPGG +FDPL Sbjct: 44 VAAAAVAPKKS-WIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAGADPGAIAPFS-FGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAENFANFTG-EQGYPGGKFFDPL 201 The following BLAST results are available for this feature:
BLAST of EY753554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753554 ID=EY753554; Name=EY753554; organism=Citrus sinensis; type=EST; length=857bpback to top |