EY753508

Overview
NameEY753508
Unique NameEY753508
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753508 vs. ExPASy Swiss-Prot
Match: ATPG_TOBAC (ATP synthase gamma chain, chloroplastic OS=Nicotiana tabacum GN=ATPC PE=1 SV=1)

HSP 1 Score: 355.14 bits (910), Expect = 2.904e-97
Identity = 186/260 (71.54%), Postives = 212/260 (81.54%), Query Frame = 3
Query:   69 MSCSNL-------PVCRDTSSLSFGSFLNPFRPPHNAT--PNNPSRSSSVTPIHCGLRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEESDXVELLYTKFVSLVKSDPVITLCFPIT-EGRDCDVNGVCV 818
            MSCSNL       P   D+S+LSF S ++PF+ P++ T  P+NPSRSSSVTP+HCGLR+LR+RI+SVKNTQKITEAMKLVAAAKVRRAQEAVV  RPFSETLVEVLYNINEQLQ +DIDVPL              TGDRGLCGGFNN +IKKAEARI +LK LG+DYTIISVGKKGN+YF+RRPYIPVD+FLEG +LPTAK+AQ IADDVFSLFVSEE D VELLYTKFVSLVKS+PVI    P++ +G  CD+NG CV
Sbjct:    1 MSCSNLTMLVSSKPSLSDSSALSFRSSVSPFQLPNHNTSGPSNPSRSSSVTPVHCGLRDLRDRIESVKNTQKITEAMKLVAAAKVRRAQEAVVGARPFSETLVEVLYNINEQLQTDDIDVPLTKVRPVKKVALVVVTGDRGLCGGFNNYLIKKAEARIRDLKALGIDYTIISVGKKGNSYFIRRPYIPVDKFLEGSNLPTAKDAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSEPVIHTLLPLSPKGEICDINGNCV 260          
BLAST of EY753508 vs. ExPASy Swiss-Prot
Match: ATPG1_ARATH (ATP synthase gamma chain 1, chloroplastic OS=Arabidopsis thaliana GN=ATPC1 PE=1 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 3.110e-91
Identity = 180/260 (69.23%), Postives = 205/260 (78.85%), Query Frame = 3
Query:   69 MSCSNLP---------VCRDTSSLSFGSFLNPFRPPHNATPNNPSRSSSVTPIHCGLRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEESDXVELLYTKFVSLVKSDPVITLCFPIT-EGRDCDVNGVCV 818
            M+CSNL          +  D+SSLSF S L    P + ++P  PSR+SSV+P+   LRELR+RIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQ +D+DVPL              TGDRGLCGGFNN IIKKAEARI ELK LGL+YT+ISVGKKGN+YFLRRPYIPVD++LE G+LPTAKEAQ +ADDVFSLF+SEE D VELLYTKFVSLVKS+PVI    P++ +G  CD+NG CV
Sbjct:    1 MACSNLTTMWVSSKPSLSADSSSLSFRSVLKC--PTNTSSP--PSRASSVSPLQASLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTDDVDVPLTKVRPVKKVALVVVTGDRGLCGGFNNFIIKKAEARIKELKGLGLEYTVISVGKKGNSYFLRRPYIPVDKYLEAGTLPTAKEAQAVADDVFSLFISEEVDKVELLYTKFVSLVKSEPVIHTLLPLSPKGEICDINGTCV 256          
BLAST of EY753508 vs. ExPASy Swiss-Prot
Match: ATPG_PEA (ATP synthase gamma chain, chloroplastic OS=Pisum sativum GN=ATPC PE=2 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.182e-90
Identity = 177/255 (69.41%), Postives = 204/255 (80.00%), Query Frame = 3
Query:   63 ITMSCSNLPVCRDTSSLSFGSFLNPFRPP--HNATPNNPSRSSSVTPIHCGLRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEESDXVELLYTKFVSLVKSDPVITLCFPIT-EGRDCDVNGVCV 818
            +TM  S+ P   D S+LSF S  NPF+ P  ++++   PSR +S   I CGL++L+ RIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLY+INEQLQ +DI+ PL              TGDRGLCGGFNN I+KKAEARIAELK LGL+YT++SVG+KGN+YF RRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEE D VELLYTKFVSLVKS+P+I    P++ +G  CD+NG CV
Sbjct:    6 VTMLVSSKPSLPDASNLSFRSAFNPFQLPSQNSSSSCTPSRPTS---IQCGLKDLKNRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYSINEQLQTDDIESPLTKLRPVKKVALVVCTGDRGLCGGFNNAILKKAEARIAELKELGLEYTVVSVGRKGNSYFNRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSNPIIHTLLPLSPKGEICDINGNCV 257          
BLAST of EY753508 vs. ExPASy Swiss-Prot
Match: ATPG_SPIOL (ATP synthase gamma chain, chloroplastic OS=Spinacia oleracea GN=ATPC PE=1 SV=2)

HSP 1 Score: 316.235 bits (809), Expect = 1.495e-85
Identity = 168/244 (68.85%), Postives = 189/244 (77.46%), Query Frame = 3
Query:  108 SLSFGSFLNPFRPPHN-----ATPNNPSRSSSVTPIHCG-LRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEESDXVELLYTKFVSLVKSDPVITLCFPIT-EGRDCDVNGVCV 818
            SLSF S ++ F  P       A PNN +   +  PI C  LRELR+RI SVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYN+NEQLQ ED+DVPL              TGDRGLCGGFNN ++KKAE+RIAELK LG+DYTIIS+GKKGN YF+RRP IPVDR+ +G +LPTAKEAQ IADDVFSLFVSEE D VE+LYTKFVSLVKSDPVI    P++ +G  CD+NG CV
Sbjct:    4 SLSFSSSVSTFHLPTTTQSTQAPPNNATTLPTTNPIQCANLRELRDRIGSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNMNEQLQTEDVDVPLTKIRTVKKVALMVVTGDRGLCGGFNNMLLKKAESRIAELKKLGVDYTIISIGKKGNTYFIRRPEIPVDRYFDGTNLPTAKEAQAIADDVFSLFVSEEVDKVEMLYTKFVSLVKSDPVIHTLLPLSPKGEICDINGKCV 247          
BLAST of EY753508 vs. ExPASy Swiss-Prot
Match: ATPG_MAIZE (ATP synthase subunit gamma, chloroplastic OS=Zea mays PE=1 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 4.820e-76
Identity = 152/251 (60.56%), Postives = 184/251 (73.31%), Query Frame = 3
Query:   69 MSCSNLPVCRDTSSLSFGSFLNPFRPPHNATPNNPSRSSSVTPIHCGLRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEESDXVELLYTKFVSLVKSDPVITLCFPIT-EGRDCDVNGVCV 818
            MSCS+L     +S+L+  +     R        +P RS  +  + C LRELR RIDSV+NTQKITEAMKLVAAAKVRRAQEAVV+ RPFSE LVEVLYN+N+++Q EDID+PL              TG+RGLCG FNNN++KKAE RI ELK LGL YT++SVGKKGNAYF RRPYIP++R LE  S+PT K++Q I D V+SLFVSEE D VELLY+KFVSLV+SDP+I    P++ +G  CDVNGVCV
Sbjct:    1 MSCSHLSTAWSSSALASSASTTRRR--------SPPRSGLL--VRCSLRELRTRIDSVRNTQKITEAMKLVAAAKVRRAQEAVVSSRPFSEALVEVLYNMNQEIQTEDIDLPLTRTRPVKKVALVVLTGERGLCGSFNNNVLKKAETRIDELKQLGLQYTVVSVGKKGNAYFQRRPYIPLERDLEVSSVPTVKDSQAICDLVYSLFVSEEVDKVELLYSKFVSLVRSDPIIQTLLPMSPKGEICDVNGVCV 241          
BLAST of EY753508 vs. ExPASy Swiss-Prot
Match: ATPG2_ARATH (ATP synthase gamma chain 2, chloroplastic OS=Arabidopsis thaliana GN=ATPC2 PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 5.514e-72
Identity = 152/255 (59.61%), Postives = 177/255 (69.41%), Query Frame = 3
Query:   72 SCSNLPVCRDTSSLSFGSFLNPFR--PPHNATPNNPSRSSSVTPIH--CGLRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEGGSL-PTAKEAQTIADDVFSLFVSEESDXVELLYTKFVSLVKSDPVITLCFPIT-EGRDCDVNGVCV 818
            S SN      + S SF + L P R  P  + TPN  S  S +  I    G+RELRERIDSVKNTQKITEAM+LVAAA+VRRAQ+AV+ GRPF+ETLVE+LY+IN+  Q EDID PL              TGD+GLCGGFNN + KKA  R+ ELK  G+D  +ISVGKKGNAYF RR    VD+ +EGG + PT KEAQ IADDVFSLFVSEE D VEL+YTKFVSLVKSDPVI    P++ +G  CDV G CV
Sbjct:   13 SPSNSNSASSSESYSFIATLKPVRYYPFQSLTPNRISSRSPLPSIQIRAGIRELRERIDSVKNTQKITEAMRLVAAARVRRAQDAVIKGRPFTETLVEILYSINQSAQLEDIDFPLSIVRPVKRVALVVVTGDKGLCGGFNNAVTKKATLRVQELKQRGIDCVVISVGKKGNAYFSRRDEFDVDKCIEGGGVFPTTKEAQVIADDVFSLFVSEEVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGESCDVKGECV 267          
BLAST of EY753508 vs. ExPASy Swiss-Prot
Match: ATPG_CHLRE (ATP synthase gamma chain, chloroplastic OS=Chlamydomonas reinhardtii GN=ATPC PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 2.034e-58
Identity = 114/205 (55.61%), Postives = 148/205 (72.20%), Query Frame = 3
Query:  207 GLRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEESDXVELLYTKFVSLVKSDPVITLCFPITE-GRDCDVNGVCV 818
            GL+E+R+RI SVKNTQKIT+AMKLVAAAKVRRAQEAVVNGRPFSE LV+VLY +N++++ ED+D PL              TGDRGLCGG+NN IIKK EAR  EL  +G+   ++ VG+KG  YF RR    + +    G+ P+ KEAQ IAD++F+ F+++ESD VEL++TKF+SL+ S+P I    P+T  G  CDV+G CV
Sbjct:   36 GLKEVRDRIASVKNTQKITDAMKLVAAAKVRRAQEAVVNGRPFSENLVKVLYGVNQRVRQEDVDSPLCAVRPVKSVLLVVLTGDRGLCGGYNNFIIKKTEARYRELTAMGVKVNLVCVGRKGAQYFARRKQYNIVKSFSLGAAPSTKEAQGIADEIFASFIAQESDKVELVFTKFISLINSNPTIQTLLPMTPMGELCDVDGKCV 240          
BLAST of EY753508 vs. ExPASy Swiss-Prot
Match: ATPG_ANAVT (ATP synthase gamma chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=atpG PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 8.567e-49
Identity = 102/195 (52.31%), Postives = 137/195 (70.26%), Query Frame = 3
Query:  210 LRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEG-GSLPTAKEAQTIADDVFSLFVSEESDXVELLYTKFVSLVKSDPVITLCFPI-TEG 788
            L+ +R+RI SVKNT+KITEAM+LVAAA+VRRAQE V+  RPF++ L +VLY +  +L+ ED+D+PL+             +GDRGLCGG+N N+I++AE R  ELK  GLDYT + VG+K   YF RR   P+D    G   +PTA+EA  IAD++ SLF+SE+ D +EL+YT+FVSLV S PVI    P+ T+G
Sbjct:    4 LKSIRDRIQSVKNTKKITEAMRLVAAARVRRAQEQVIATRPFADRLAQVLYGLQTRLRFEDVDLPLLKKREVKSVGLLVISGDRGLCGGYNTNVIRRAENRAKELKKEGLDYTFVIVGRKAEQYFRRREQ-PIDASYTGLEQIPTAEEANKIADELLSLFLSEKVDRIELVYTRFVSLVSSRPVIQTLLPLDTQG 197          
BLAST of EY753508 vs. ExPASy Swiss-Prot
Match: ATPG_ANASP (ATP synthase gamma chain OS=Anabaena sp. (strain PCC 7120) GN=atpG PE=3 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 1.119e-48
Identity = 102/195 (52.31%), Postives = 136/195 (69.74%), Query Frame = 3
Query:  210 LRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEG-GSLPTAKEAQTIADDVFSLFVSEESDXVELLYTKFVSLVKSDPVITLCFPI-TEG 788
            L+ +R+RI SVKNT+KITEAM+LVAAA+VRRAQE V+  RPF++ L +VLY +  +L+ ED+D+PL+             +GDRGLCGG+N N+I++AE R  ELK  GLDYT + VG+K   YF RR   P+D    G   +PTA EA  IAD++ SLF+SE+ D +EL+YT+FVSLV S PVI    P+ T+G
Sbjct:    4 LKSIRDRIQSVKNTKKITEAMRLVAAARVRRAQEQVIATRPFADRLAQVLYGLQTRLRFEDVDLPLLKKREVKSVGLLVISGDRGLCGGYNTNVIRRAENRAKELKAEGLDYTFVIVGRKAEQYFRRREQ-PIDASYTGLEQIPTADEANKIADELLSLFLSEKVDRIELVYTRFVSLVSSRPVIQTLLPLDTQG 197          
BLAST of EY753508 vs. ExPASy Swiss-Prot
Match: ATPG_CYAP7 (ATP synthase gamma chain OS=Cyanothece sp. (strain PCC 7424) GN=atpG PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.237e-47
Identity = 94/191 (49.21%), Postives = 133/191 (69.63%), Query Frame = 3
Query:  210 LRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEESDXVELLYTKFVSLVKSDPVITLCFPIT 782
            L+ +R+RI SVKNT+KITEAM+LVAAAKVRRAQE V+  RPF++ L +VLYN+  +LQ  ++ +PL+             TGDRGLCGG+N N+IK+ E RI ELK+ G++Y ++ +G+K   YF RR      ++ E   +P+A EA TI+D++ SLF+SE  D VEL+YT+F+SL+ S PV+    P+T
Sbjct:    4 LKFIRDRIQSVKNTKKITEAMRLVAAAKVRRAQEQVIATRPFADALAQVLYNLQNRLQFGEVSLPLLTQREIKTVAVLVVTGDRGLCGGYNANVIKRTEQRIKELKSQGINYKLVLIGRKAVQYFERRNAPIQTKYTELSQIPSASEASTISDELLSLFLSETVDRVELIYTRFLSLISSKPVVQTLLPLT 194          
The following BLAST results are available for this feature:
BLAST of EY753508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPG_TOBAC2.904e-9771.54ATP synthase gamma chain, chloroplastic OS=Nicotia... [more]
ATPG1_ARATH3.110e-9169.23ATP synthase gamma chain 1, chloroplastic OS=Arabi... [more]
ATPG_PEA1.182e-9069.41ATP synthase gamma chain, chloroplastic OS=Pisum s... [more]
ATPG_SPIOL1.495e-8568.85ATP synthase gamma chain, chloroplastic OS=Spinaci... [more]
ATPG_MAIZE4.820e-7660.56ATP synthase subunit gamma, chloroplastic OS=Zea m... [more]
ATPG2_ARATH5.514e-7259.61ATP synthase gamma chain 2, chloroplastic OS=Arabi... [more]
ATPG_CHLRE2.034e-5855.61ATP synthase gamma chain, chloroplastic OS=Chlamyd... [more]
ATPG_ANAVT8.567e-4952.31ATP synthase gamma chain OS=Anabaena variabilis (s... [more]
ATPG_ANASP1.119e-4852.31ATP synthase gamma chain OS=Anabaena sp. (strain P... [more]
ATPG_CYAP71.237e-4749.21ATP synthase gamma chain OS=Cyanothece sp. (strain... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-F07-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753508 ID=EY753508; Name=EY753508; organism=Citrus sinensis; type=EST; length=874bp
TCTTTCCCTTTTCTTTGAGTGCTTAGACTCTCACCTTGAGCTCCAACAAT
CCGTTATCAGTTATCACCATGTCTTGCTCAAACCTACCTGTGTGTCGTGA
CACTTCTTCGCTCTCTTTTGGCTCATTTCTCAACCCATTTAGGCCTCCTC
ACAATGCAACCCCCAACAACCCTTCTAGATCTTCATCAGTTACTCCAATT
CATTGTGGTCTCCGCGAGCTCAGAGAACGTATTGATTCTGTAAAGAACAC
ACAGAAGATCACCGAGGCCATGAAGCTTGTGGCCGCTGCTAAAGTCAGAA
GAGCTCAGGAAGCTGTTGTCAATGGCAGGCCTTTCTCTGAAACTCTTGTT
GAGGTTCTTTACAACATCAATGAGCAGCTTCAAAATGAAGACATAGATGT
TCCTTTGATCAAAGTTAGACCTGTCAAGAAAGTTGCTTTGGTTGTTGTCA
CTGGTGATCGTGGTCTTTGTGGTGGTTTCAACAACAATATTATTAAGAAA
GCTGAAGCGAGAATTGCAGAATTGAAGACTCTTGGACTTGATTACACTAT
TATTAGTGTTGGTAAGAAGGGTAATGCATATTTCCTTCGTAGGCCTTATA
TTCCTGTTGATAGATTTCTTGAGGGAGGTTCATTACCTACTGCTAAAGAA
GCTCAGACTATAGCAGATGATGTGTTTTCACTCTTTGTTAGTGAAGAAAG
TGACANGGTGGAGCTTTTATACACAAAGTTTGTGTCTTTGGTTAAGTCTG
ATCCTGTGATTACACTTTGCTTCCCTATCACCGAGGGGAGAGATTGTGAT
GTGAATGGTGTTTGCGTGATGCTGCTGAGGATGATTCTTTAAATTGACAC
TAAGGAAGAAAGTAACTGTTGAAA
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