EY753422

Overview
NameEY753422
Unique NameEY753422
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY753422_ssr607 microsatellite EY753422_ssr607:607..621. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY753422 vs. ExPASy Swiss-Prot
Match: CAX1_ARATH (Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 3.672e-18
Identity = 45/75 (60.00%), Postives = 52/75 (69.33%), Query Frame = 2
Query:   38 QIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDR 262
            Q+AFYTGPT+GGLLNATCGNATELIIAI AL   K+ VVKY                  FCGGIAN+R+EQ++DR
Sbjct:  119 QLAFYTGPTLGGLLNATCGNATELIIAILALTNNKVAVVKYSLLGSILSNLLLVLGTSLFCGGIANIRREQRFDR 193          
BLAST of EY753422 vs. ExPASy Swiss-Prot
Match: CAX3_ARATH (Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.108e-17
Identity = 45/75 (60.00%), Postives = 51/75 (68.00%), Query Frame = 2
Query:   38 QIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDR 262
            Q+AFYTGPTVGGLLNATCGNATELIIAI AL   K+ VVKY                  F GGIAN+R+EQ++DR
Sbjct:  119 QLAFYTGPTVGGLLNATCGNATELIIAILALANNKVAVVKYSLLGSILSNLLLVLGTSLFFGGIANIRREQRFDR 193          
BLAST of EY753422 vs. ExPASy Swiss-Prot
Match: CAX1A_ORYSJ (Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.489e-16
Identity = 44/75 (58.67%), Postives = 48/75 (64.00%), Query Frame = 2
Query:   38 QIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDR 262
            QIA YTGPTVGGLLNATCGNATELIIA+FAL + KI+VVK                   FCGG+ NL   Q YDR
Sbjct:  110 QIALYTGPTVGGLLNATCGNATELIIALFALLKGKIEVVKCSLLGSVLSNLLLVLGTSLFCGGVVNLGARQPYDR 184          
BLAST of EY753422 vs. ExPASy Swiss-Prot
Match: CAX4_ARATH (Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.886e-14
Identity = 40/74 (54.05%), Postives = 49/74 (66.22%), Query Frame = 2
Query:   38 QIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYD 259
            QIAF+TGPTVGGL+NATCGNATE+IIAI A+ +RK+ +VK                   F GGI+NLRK Q +D
Sbjct:  120 QIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVLGTSLFLGGISNLRKHQSFD 193          
BLAST of EY753422 vs. ExPASy Swiss-Prot
Match: CAX1B_ORYSJ (Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.723e-13
Identity = 42/74 (56.76%), Postives = 45/74 (60.81%), Query Frame = 2
Query:   38 QIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYD 259
            QIAFYTGPTVGGLLNAT GN TE+IIA+ AL E KI+VVK                   F  GIANLR  Q YD
Sbjct:  118 QIAFYTGPTVGGLLNATFGNVTEVIIALLALREGKIEVVKCSLLGSILSNLLLVLGTSLFLAGIANLRAHQPYD 191          
BLAST of EY753422 vs. ExPASy Swiss-Prot
Match: CAX1C_ORYSJ (Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica GN=CAX1c PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.494e-11
Identity = 40/111 (36.04%), Postives = 58/111 (52.25%), Query Frame = 2
Query:   41 IAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDR------VSYLFWSDI*YIMVLSSKYPNFTGPKYDSKS 355
            IA   GPT GG++NATCGN  ELIIA+FAL++ K++++K+                    GGI N+ KE+  D+      +  L    + +I  L SKY + TG   +S S
Sbjct:  126 IANTVGPTAGGIMNATCGNVPELIIALFALHKNKMEILKWSLLGSILSNLLLVLGSSLLFGGIVNIGKERPLDKRQADVSIGLLLLGVLCHIATLVSKYTSSTGDSINSSS 236          
BLAST of EY753422 vs. ExPASy Swiss-Prot
Match: CAX3_ORYSJ (Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.685e-11
Identity = 38/95 (40.00%), Postives = 52/95 (54.74%), Query Frame = 2
Query:   38 QIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRVSYLFWSDI*YIMVLSSKYP 322
            Q+A YTGPTVGGLLNAT GNATE+IIAI+AL    I VV+                   F GGI +  K+Q + + + +  S +  + V+   +P
Sbjct:   97 QLAIYTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAGGIVHRNKDQVFSKATAVVNSGLLLMAVMGLMFP 191          
The following BLAST results are available for this feature:
BLAST of EY753422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
CAX1_ARATH3.672e-1860.00Vacuolar cation/proton exchanger 1 OS=Arabidopsis ... [more]
CAX3_ARATH3.108e-1760.00Vacuolar cation/proton exchanger 3 OS=Arabidopsis ... [more]
CAX1A_ORYSJ4.489e-1658.67Vacuolar cation/proton exchanger 1a OS=Oryza sativ... [more]
CAX4_ARATH1.886e-1454.05Vacuolar cation/proton exchanger 4 OS=Arabidopsis ... [more]
CAX1B_ORYSJ2.723e-1356.76Vacuolar cation/proton exchanger 1b OS=Oryza sativ... [more]
CAX1C_ORYSJ1.494e-1136.04Vacuolar cation/proton exchanger 1c OS=Oryza sativ... [more]
CAX3_ORYSJ9.685e-1140.00Vacuolar cation/proton exchanger 3 OS=Oryza sativa... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-F02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753422 ID=EY753422; Name=EY753422; organism=Citrus sinensis; type=EST; length=897bp
TTCAAATCTTTTTGTTGTTCGTTCTCAAAATTGCAGGCAAATTGCTTTCT
ACACTGGCCCAACAGTGGGGGGATTATTGAACGCGACATGCGGCAATGCC
ACGGAGCTCATCATAGCAATTTTTGCCCTATACGAACGTAAAATTGACGT
GGTCAAATATTCTCTTTTGGGTTCCATTCTCTCAAACCTTCTTCTGGTTC
TTGGCACTTCGCTCTTCTGTGGAGGGATTGCCAATCTCAGAAAGGAACAA
AAATACGATAGAGTAAGTTATTTATTTTGGTCAGATATATAATACATAAT
GGTGCTCAGCTCCAAATATCCGAATTTTACCGGACCTAAGTACGACTCTA
AATCAGTGTTTATCATATGAATTTTTACATTTGTTGTAATTTACAGTCCA
ATTAAAATATGCAAAATTAAATAATACGAGAGGTGGGTCAGGTGGGCAAA
TCTACAGTGTTTCCATTGTTTGAGGTGAAGTGTAAGTTGCAAAAAAATAT
AATTTAGCAGGACCCACACCTTATAACTCANAAGTTAGAAAAATGAGTGC
TGATTAATTGAGTTAATGTGATGGACGTTTTGACAGAAACAAGCCGATGT
CAACTCGCTGCTGCTGCTGCTGGCATTGCTGTGCCACATGTTACCATTGC
TATTCAAATACGCTGCGGCCTCCTCTGATATACTGCCAAGGCGACCCTTC
AGCTATCAAGACCAGCAGCATTGTAATGCTGATTGGGTACATCGCCTATC
TCGTCTCCCAATTGTGGACACACGGGGATTTTTTTGAGCTCAAGAGGTAT
TTATTTTCCTGAAGCACCCCAAAAAAAAAATTATATGACATTTTAATAAA
TACTTGAAATGTAATTTTGTAAAATCTGGGATATTGAAATTTGATGA
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