EY753360

Overview
NameEY753360
Unique NameEY753360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6243 contig Csv1_Contig6243:65..926. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPR2_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana GN=CLPR2 PE=1 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 5.848e-103
Identity = 156/208 (75.00%), Postives = 179/208 (86.06%), Query Frame = 2
Query:    8 SASLSCNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRD 631
            S S SC++KL+SGLK QS S   +G  NL+ EFYGRV+KSL SG    K  R R+ MMPIGTP+V YR   EG+WQWVD+WNALYRERVIFIGQNIDEEFSNQILATMLYLD++DDS+R+Y+Y+NGPGGD+TP+LAIYDTM+SLKSPVGTHCVG AY+LAGFLLA GEKG+R AMPLSRIAL SPAGAARGQADDI+NEA EL R+RD
Sbjct:   13 SLSPSCSIKLYSGLKPQSASFLASGYQNLNKEFYGRVYKSLQSG--TGKASRSRVKMMPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAARGQADDIQNEAKELSRIRD 218          

HSP 2 Score: 78.9518 bits (193), Expect = 5.848e-103
Identity = 34/51 (66.67%), Postives = 45/51 (88.24%), Query Frame = 1
Query:  631 YIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKEIA 783
            Y+F EL++ TGQP E++ KDLSR+KRF ++EA+EYGLID+I+RPPRIKE A
Sbjct:  219 YLFNELAKNTGQPAERVFKDLSRVKRFNAEEAIEYGLIDKIVRPPRIKEDA 269          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP2_THEEB (ATP-dependent Clp protease proteolytic subunit 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.977e-46
Identity = 93/170 (54.71%), Postives = 114/170 (67.06%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDTFSRSCLGKQVSPLRRLRR 688
            MPIG PKV YR PGE   QW+D++N LYRER+IF+G+ +D+E +NQI+A MLYLDS D  K + LYIN PGG VT  +AIYDTMQ +KS V T CVG A  +  FLLA G KG R A+P SRI +  P+G  RGQA DI  EA E+LRVR   +         PL ++ R
Sbjct:    1 MPIGVPKVPYRLPGEPYTQWIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPGKDIMLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEIEAREILRVRRQLNELYAYHTGQPLEKIER 170          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNSC (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain CC9605) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.065e-45
Identity = 82/157 (52.23%), Postives = 106/157 (67.52%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDTFSRS 646
            MPIGTP V YR PG    +WVD++  L  ER++F+G  +++  +N ++A MLYLDS D SK +YLYIN PGG VT  LAIYDT+Q +KS V T CVG A  +  FLLA G KG R A+P SRI +  P  G +R QA DI  EA E+LR+++  +RS
Sbjct:    1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQPLGGTSRRQASDIEIEAREILRMKEMLNRS 157          

HSP 2 Score: 43.8986 bits (102), Expect = 2.065e-45
Identity = 22/42 (52.38%), Postives = 27/42 (64.29%), Query Frame = 1
Query:  640 KELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 765
            + LS  +GQ FEKI KD  R     ++EA EYGLIDR+I  P
Sbjct:  156 RSLSDMSGQSFEKIEKDTDRDYFLSAEEAKEYGLIDRVISHP 197          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP3_ANASP (Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Anabaena sp. (strain PCC 7120) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.614e-45
Identity = 89/170 (52.35%), Postives = 114/170 (67.06%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDTFSRSCLGKQVSPLRRLRR 688
            MPIG PKV YR PG     W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D  K +YLYIN PGG VT  LAIYDTMQ +KS V T CVG A  +  FLLA G KG R A+P SRI +  P+G  RGQA DI  EA E+LR+R   ++        PL ++ +
Sbjct:    1 MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPHSRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYANNTSQPLAKIEK 170          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP2_ANAVT (ATP-dependent Clp protease proteolytic subunit 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 9.576e-45
Identity = 89/170 (52.35%), Postives = 114/170 (67.06%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDTFSRSCLGKQVSPLRRLRR 688
            MPIG PKV YR PG     W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D  K +YLYIN PGG VT  LAIYDTMQ +KS V T CVG A  +  FLLA G KG R A+P SRI +  P+G  RGQA DI  EA E+LR+R   ++        PL ++ +
Sbjct:    1 MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYANNTNQPLAKIEK 170          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNPX (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain WH8102) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.011e-44
Identity = 82/157 (52.23%), Postives = 106/157 (67.52%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDTFSRS 646
            MPIGTP V YR PG    +WVD++  L  ER++F+G  +++  +N ++A MLYLDS D SK +YLYIN PGG VT  LAIYDT+Q +KS V T CVG A  +  FLLA G KG R A+P SRI +  P  G +R QA DI  EA E+LR+++  +RS
Sbjct:    1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQPLGGTSRRQASDIEIEAREILRMKEMLNRS 157          

HSP 2 Score: 41.5874 bits (96), Expect = 1.011e-44
Identity = 20/42 (47.62%), Postives = 27/42 (64.29%), Query Frame = 1
Query:  640 KELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 765
            + LS  +GQ F+KI KD  R     ++EA +YGLIDR+I  P
Sbjct:  156 RSLSDMSGQSFDKIEKDTDRDYFLSAEEAKDYGLIDRVISHP 197          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMT (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus (strain NATL2A) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.011e-44
Identity = 80/157 (50.96%), Postives = 107/157 (68.15%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDTFSRS 646
            MPIGTP V YR PG    +WVD++  L  ER++F+GQ +++  +N ++A MLYLDS D SK +YLYIN PGG VT  LAIYDTM+ +KS + T CVG A  +  FLL+ G KG R A+P SRI +  P  G A+ QA DI  EA E+LR+++  ++S
Sbjct:    1 MPIGTPSVPYRLPGSQFERWVDIYTRLGAERILFLGQEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTMKYVKSDLVTICVGLAASMGAFLLSAGTKGKRLALPHSRIMIHQPLGGTAQRQASDIEIEAREILRIKEMLNKS 157          

HSP 2 Score: 42.3578 bits (98), Expect = 1.011e-44
Identity = 20/42 (47.62%), Postives = 26/42 (61.90%), Query Frame = 1
Query:  640 KELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 765
            K ++  TGQ +EKI KD  R     ++EA  YGLIDR+I  P
Sbjct:  156 KSMAEMTGQTYEKIEKDTDRDYFLSAEEAKNYGLIDRVITHP 197          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNS9 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain CC9902) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.718e-44
Identity = 82/157 (52.23%), Postives = 105/157 (66.88%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDTFSRS 646
            MPIGTP V YR PG    +WVD++  L  ER++F+G  +++  +N ++A MLYLDS D SK +YLYIN PGG VT  LAIYDT+Q +KS V T CVG A  +  FLLA G KG R A+P SRI +  P  G +R QA DI  EA E+LR++D  + S
Sbjct:    1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQPLGGTSRRQASDIEIEAREILRMKDMLNHS 157          

HSP 2 Score: 41.2022 bits (95), Expect = 1.718e-44
Identity = 20/40 (50.00%), Postives = 26/40 (65.00%), Query Frame = 1
Query:  646 LSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 765
            L+  +GQ FEKI KD  R     ++EA+ YGLIDR+I  P
Sbjct:  158 LADMSGQTFEKIEKDTDRDYFLSAEEAMAYGLIDRVISHP 197          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_OLTVI (ATP-dependent Clp protease proteolytic subunit OS=Oltmannsiellopsis viridis GN=clpP PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.786e-44
Identity = 85/170 (50.00%), Postives = 121/170 (71.18%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDTFSRSCLGKQVSPLRRLRR 688
            MPIG PKV +R PGE S QWVDL+N LYRERV+F+ Q++D+E +NQ++  MLYL++ + SK +Y+YIN PGG VT  +A+YDTM  +K+ V T CVG A  +A F+LAGG +G R A+P SRI +  P G +RGQA ++ +E++E++R+R    +    +   PLRR+ R
Sbjct:    1 MPIGVPKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEEKSKDLYIYINSPGGSVTCGIAVYDTMNYIKADVTTICVGTAASMASFVLAGGTQGKRIALPHSRIMIHQPEGGSRGQASEVLSESEEVMRIRRQVGKIYAQRTGQPLRRISR 170          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP2_PROM9 (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus (strain MIT 9312) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 3.801e-44
Identity = 81/157 (51.59%), Postives = 107/157 (68.15%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDTFSRS 646
            MPIGTP V YR PG    +WVD++  L  ER++F+GQ +++  +N ++A MLYLDS D+SK +YLYIN PGG VT  LAIYDT++ +KS V T CVG A  +  FLLA G KG R A+P SRI +  P  G ++ QA DI  EA E+LR++D  + S
Sbjct:    1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSDDNSKPIYLYINSPGGSVTAGLAIYDTIKYVKSDVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQPLGGTSQRQASDIEIEAKEILRIKDMLNMS 157          

HSP 2 Score: 40.817 bits (94), Expect = 3.801e-44
Identity = 20/36 (55.56%), Postives = 23/36 (63.89%), Query Frame = 1
Query:  658 TGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 765
            TGQ FEKI KD  R     ++EA  YGLIDR+I  P
Sbjct:  162 TGQSFEKIEKDTDRDYFLSAEEAKNYGLIDRVITHP 197          
The following BLAST results are available for this feature:
BLAST of EY753360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPR2_ARATH5.848e-10375.00ATP-dependent Clp protease proteolytic subunit-rel... [more]
CLPP2_THEEB2.977e-4654.71ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP3_SYNSC2.065e-4552.23ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP3_ANASP5.614e-4552.35Probable ATP-dependent Clp protease proteolytic su... [more]
CLPP2_ANAVT9.576e-4552.35ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP3_SYNPX1.011e-4452.23ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP2_PROMT1.011e-4450.96ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP3_SYNS91.718e-4452.23ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP_OLTVI2.786e-4450.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP2_PROM93.801e-4451.59ATP-dependent Clp protease proteolytic subunit 2 O... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-H05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753360 ID=EY753360; Name=EY753360; organism=Citrus sinensis; type=EST; length=860bp
CCACGCGTCCGCTTCTCTGAGCTGTAACCTCAAGCTTTTTTCTGGATTAA
AGATTCAATCACCAAGTGTTTTTGGAACTGGGAAACCTAATTTGAGTGCT
GAATTCTATGGCAGAGTTCATAAGAGCCTCTACTCCGGCATTCGTAATGA
TAAACCAATAAGGGGACGAATTGCAATGATGCCGATTGGGACACCAAAAG
TGCTTTATAGGACGCCTGGTGAGGGATCTTGGCAATGGGTTGATCTATGG
AATGCCCTATATCGAGAACGTGTTATTTTCATTGGGCAAAATATAGATGA
AGAATTTAGCAACCAAATATTGGCAACGATGTTGTATCTAGACAGTGTTG
ATGATTCCAAAAGGGTTTATTTGTACATCAATGGTCCCGGTGGGGATGTT
ACTCCCACCTTGGCAATTTACGACACTATGCAGAGCTTGAAGAGTCCTGT
TGGCACTCACTGTGTGGGCTTTGCCTATCATTTAGCAGGGTTTCTTCTAG
CAGGTGGAGAAAAGGGTAATCGGTCTGCAATGCCTCTTTCGAGAATTGCT
TTAGACTCTCCAGCTGGTGCAGCTCGTGGTCAGGCTGATGACATTCGTAA
TGAAGCAGATGAGCTTCTTAGAGTCAGAGATACATTTTCAAGGAGTTGTC
TAGGAAAACAGGTCAGCCCTTTGAGAAGATTACGAAGGATTTAAGTAGGA
TTAAACGCTTTGGTTCCCAGGAGGCTCTTGAATATGGGCTGATAGATCGT
ATAATCAGGCCACCTCGTATTAAGGAGATTGCCTCGTAAAGAGCTTGGAC
AGGTCTGGNNTTAGGTATCATTGATTCTCCACTGATAGACTGAGTCATCA
ATATTTATCT
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