FK826718

Overview
NameFK826718
Unique NameFK826718
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length122
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8323 contig Csv1_Contig8323:160..281. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FK826718 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.505e-14
Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = 3 
Query:    3 KEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESPIIVQ 122
            KEEDL+NKSPLLLQMNP+HKKIPVLIHNG+P+CES I V+
Sbjct:   34 KEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVE 73
[Close]
BLAST of FK826718 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.241e-13
Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = 3 
Query:    3 KEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESPIIVQ 122
            KEE+L N+SPLLLQMNP+HKKIPVLIHNG+P+CES IIVQ
Sbjct:   33 KEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQ 72
[Close]
BLAST of FK826718 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.117e-13
Identity = 32/40 (80.00%), Postives = 38/40 (95.00%), Query Frame = 3 
Query:    3 KEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESPIIVQ 122
            K+EDL+NKSPLLLQMNP+HKKIPVLIHNG+P+CES I V+
Sbjct:   34 KQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVE 73
[Close]
BLAST of FK826718 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.982e-11
Identity = 29/39 (74.36%), Postives = 36/39 (92.31%), Query Frame = 3 
Query:    6 EEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESPIIVQ 122
            EEDL+NKSPLLLQ NP+HKKIPVLIHNG+ +CES +I++
Sbjct:   33 EEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILE 71
[Close]
BLAST of FK826718 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.982e-11
Identity = 29/40 (72.50%), Postives = 37/40 (92.50%), Query Frame = 3 
Query:    3 KEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESPIIVQ 122
            KEE+L +KSPLLL+MNPVHKKIP+LIHNG+P+CES  I++
Sbjct:   34 KEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILE 73
The following BLAST results are available for this feature:
BLAST of FK826718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GSTX4_TOBAC9.505e-1482.50Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_SOYBN1.241e-1382.50Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTXC_TOBAC2.117e-1380.00Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX1_SOLTU1.982e-1174.36Probable glutathione S-transferase OS=Solanum tube... [more]
GSTX1_NICPL1.982e-1172.50Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
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Properties
Property NameValue
Genbank descriptionclone456 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 456, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826718 ID=FK826718; Name=FK826718; organism=Citrus sinensis; type=EST; length=122bp
ACAAGGAAGAGGACTTGAAGAACAAGAGCCCCCTGCTTCTGCAGATGAAC
CCCGTTCACAAGAAGATCCCGGTTCTCATCCACAACGGCAGACCGGTCTG
TGAGTCACCCATCATTGTTCAG
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