EY752747

Overview
NameEY752747
Unique NameEY752747
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY752747 vs. ExPASy Swiss-Prot
Match: PR1C_TOBAC (Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 4.467e-11
Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 3 
Query:   42 NEARPYVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYGENLAWADYDF-TVDHILKMWVDDKQFYNHNS 263
            N AR  VG+   +TWD  +  +A +YA +L  DC + HS   YGENLAW   DF T    ++MWV++KQ+Y H+S
Sbjct:   42 NTARADVGVE-PLTWDDQVAAYAQNYASQLAADCNLVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDS 115
The following BLAST results are available for this feature:
BLAST of EY752747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PR1C_TOBAC4.467e-1145.33Pathogenesis-related protein 1C OS=Nicotiana tabac... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-077-F09-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY752747 ID=EY752747; Name=EY752747; organism=Citrus sinensis; type=EST; length=912bp
CGGGTTCCGGGAATTTCCCGGGGTCGACCCACGCGTCCGATAATGAAGCT
CGCCCCTATGTTGGCATTGGCATAGGCATGACATGGGACAAGACGTTGGA
GGATCATGCACATAGCTATGCACAAAAACTTAAAGTTGACTGCATAATTG
AACATTCAGTTAGCCATTACGGCGAGAACCTTGCATGGGCTGACTACGAC
TTTACCGTCGATCACATCCTGAAGATGTGGGTGGATGACAAACAATTTTA
CAACCACAACTCTATTATTTTGGCTCCTAATCTGATGGGCGGACAAATTA
TCTCATTATAGATGGAGCAAAGATGTAACACATGAATCGAGTATATGAAA
AATACTATTTTCAAAGTGATATCACGCAGAAACTGCTGTCATGTATGAAT
GACATCTTTCCCTACCAACAAAACACCAAACTCCCACCCTTCTAGACTGT
AGGGGAGTAGGGTGAACAACGCCCTATAAAACGAGTACTGTTTCTCAGAC
TTTCTTCCTCTCCACATAATATTCTCCCCTGTTCACTTATGCATCATATA
CATAAGCCAATACTCAAACTAACCAACATCTTTCAACCCATAAAAATCCG
TGACCACCTACAACCGCTCTCCCGATATATCATACCCCCCATTCACAAAC
ACAACCCAAGCATAAACAATTTATTACAACTAACACTCAACAATCAATAC
TACATAGAAAACTAAGCCTAACAACCAACATAAACCACAGCTCTGTCTCT
TTACAATATCCCTTCATATATCAGCTATCTCATGCTTTCAGCCTCCGCAT
TCTCGTGAGCCCTGAGACACCACACACTTATAATCAACATCCAGTGGCAA
ATAAATATGAGAAGAGATCGAGCAAATCTGCATGTCAGCAAGAACAGCAA
CTACTACCGTAC
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