FE659298
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FE659298 vs. ExPASy Swiss-Prot
Match: PUB18_ARATH (U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.894e-18 Identity = 49/109 (44.95%), Postives = 71/109 (65.14%), Query Frame = 2 Query: 5 ENAVAALLKLSKHTGGKKVIVESGGLKLILKVLKSGLSLEARQIAAATLFYLTSVKGYR*LIGETPSAIPPLVNLI--EEGTDCGKINAVVAIFGLLLSQGNHRKVLDA 325 ENA+A +L LSKH GK I G LK+++++L G E R +A+ LFYL+SV+ Y LIGE P AIP L+N++ ++ D K +A++A+ GLL+ NH +VL A Sbjct: 448 ENAMAGILNLSKHVTGKSKIAGEG-LKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGDDYGDSAKRSALLAVMGLLMQSDNHWRVLAA 555
BLAST of FE659298 vs. ExPASy Swiss-Prot
Match: PUB19_ARATH (U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.206e-16 Identity = 53/112 (47.32%), Postives = 73/112 (65.18%), Query Frame = 2 Query: 5 ENAVAALLKLSKHTGGKKVIV--ESGGLKLILKVLKSGLSLEARQIAAATLFYLTSVKGYR*LIGETPSAIPPLVNLIE--EGTDCGKINAVVAIFGLLLSQ-GNHRKVLDA 325 ENA+A ++ LSK GK IV + GGL+LI++VL G E+RQ AAA LFYL+S+ Y LIGE AIP LV +++ + D K NA++AI LL++Q NH ++L A Sbjct: 434 ENAMAGIMNLSKDIAGKTRIVGEDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSCDYGDSAKRNALIAIRSLLMNQPDNHWRILAA 545
BLAST of FE659298 vs. ExPASy Swiss-Prot
Match: SL11_ORYSJ (Protein spotted leaf 11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 1.128e-14 Identity = 50/107 (46.73%), Postives = 67/107 (62.62%), Query Frame = 2 Query: 5 ENAVAALLKLSKHTGGKKVIVESGGLKLILKVLKSGLSLEARQIAAATLFYLTSVKGYR*LIGETPSAIPPLVNLIEEGTDCGKINAVVAIFGLLLSQGNHRKVLDA 325 E+AV ALL LS H K I+ SG + I+ VLK+G S+EAR+ AAATLF L+ + Y+ IG AIP LV L+ EG+ GK +A A+F L + QGN + + A Sbjct: 427 EHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNG-SMEARENAAATLFSLSVIDEYKVTIGGM-GAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRA 531
BLAST of FE659298 vs. ExPASy Swiss-Prot
Match: SL11_ORYSI (Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 1.128e-14 Identity = 50/107 (46.73%), Postives = 67/107 (62.62%), Query Frame = 2 Query: 5 ENAVAALLKLSKHTGGKKVIVESGGLKLILKVLKSGLSLEARQIAAATLFYLTSVKGYR*LIGETPSAIPPLVNLIEEGTDCGKINAVVAIFGLLLSQGNHRKVLDA 325 E+AV ALL LS H K I+ SG + I+ VLK+G S+EAR+ AAATLF L+ + Y+ IG AIP LV L+ EG+ GK +A A+F L + QGN + + A Sbjct: 427 EHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNG-SMEARENAAATLFSLSVIDEYKVTIGGM-GAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRA 531
BLAST of FE659298 vs. ExPASy Swiss-Prot
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.283e-14 Identity = 48/105 (45.71%), Postives = 69/105 (65.71%), Query Frame = 2 Query: 5 ENAVAALLKLSKHTGGKKVIVESGGLKLILKVLKSGLSLEARQIAAATLFYLTSVKGYR*LIGETPSAIPPLVNLIEEGTDCGKINAVVAIFGLLLSQGNHRKVL 319 E++V ALL LS + G K IV++G + I++VLK+G S+EAR+ AAATLF L+ + + IG AI L++L+EEGT GK +A AIF L + QGN + + Sbjct: 405 EHSVTALLNLSINEGNKGAIVDAGAITDIVEVLKNG-SMEARENAAATLFSLSVIDENKVAIGAA-GAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAV 507
BLAST of FE659298 vs. ExPASy Swiss-Prot
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.288e-14 Identity = 50/107 (46.73%), Postives = 66/107 (61.68%), Query Frame = 2 Query: 5 ENAVAALLKLSKHTGGKKVIVESGGLKLILKVLKSGLSLEARQIAAATLFYLTSVKGYR*LIGETPSAIPPLVNLIEEGTDCGKINAVVAIFGLLLSQGNHRKVLDA 325 E++V ALL LS K IV +G + I++VLK G S+EAR+ AAATLF L+ + + IG AIPPLV L+ EGT GK +A A+F L + QGN K + A Sbjct: 412 EHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKG-SMEARENAAATLFSLSVIDENKVTIGAL-GAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRA 516
BLAST of FE659298 vs. ExPASy Swiss-Prot
Match: PUB2_ARATH (U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.086e-13 Identity = 44/106 (41.51%), Postives = 65/106 (61.32%), Query Frame = 2 Query: 8 NAVAALLKLSKHTGGKKVIVESGGLKLILKVLKSGLSLEARQIAAATLFYLTSVKGYR*LIGETPSAIPPLVNLIEEGTDCGKINAVVAIFGLLLSQGNHRKVLDA 325 +AV LL LS + K +I ESG + ++ VLK+G EA+ +AATLF L+ ++ Y+ IGE AI PLV+L+ G+ GK +A A+F L + N KV++A Sbjct: 482 DAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEA-GAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEA 586
BLAST of FE659298 vs. ExPASy Swiss-Prot
Match: PUB11_ARATH (U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 1.801e-12 Identity = 43/107 (40.19%), Postives = 69/107 (64.49%), Query Frame = 2 Query: 5 ENAVAALLKLSKHTGGKKVIVESGGLKLILKVLKSGLSLEARQIAAATLFYLTSVKGYR*LIGETPSAIPPLVNLIEEGTDCGKINAVVAIFGLLLSQGNHRKVLDA 325 ENA+ +L LS + K++I+ +G + I++VL++G ++EAR+ AAATLF L+ + +IG + AIP LV+L+E GT GK +A A+F L + GN + + A Sbjct: 391 ENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAG-TMEARENAAATLFSLSLADENKIIIGGS-GAIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRA 495
BLAST of FE659298 vs. ExPASy Swiss-Prot
Match: PUB4_ARATH (U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.353e-12 Identity = 43/107 (40.19%), Postives = 69/107 (64.49%), Query Frame = 2 Query: 5 ENAVAALLKLSKHTGGKKVIVESGGLKLILKVLKSGLSLEARQIAAATLFYLTSVKGYR*LIGETPSAIPPLVNLIEEGTDCGKINAVVAIFGLLLSQGNHRKVLDA 325 ENAV ALL LS + KK I ++G ++ ++ VL++G S EA++ +AATLF L+ ++ + IG++ AI PLV+L+ GT GK +A A+F L + Q N ++ + Sbjct: 601 ENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENG-SSEAKENSAATLFSLSVIEENKIKIGQS-GAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQS 705
BLAST of FE659298 vs. ExPASy Swiss-Prot
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.013e-12 Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = 2 Query: 5 ENAVAALLKLSKHTGGK-KVIVESGGLKLILKVLKSGLSLEARQIAAATLFYLTSVKGYR*LIGETPSAIPPLVNLIEEGTDCGKINAVVAIFGLLLSQGNHRKVLDA 325 E+AV ++L LS K K++ SG + I+ VL+ G S+EAR+ AAATLF L+ + + IG AIPPLV L+ EG+ GK +A A+F L + QGN K + A Sbjct: 416 EHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQKG-SMEARENAAATLFSLSVIDENKVTIGAA-GAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRA 521 The following BLAST results are available for this feature:
BLAST of FE659298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FE659298 ID=FE659298; Name=FE659298; organism=Citrus sinensis; type=EST; length=327bpback to top |