FE659251

Overview
NameFE659251
Unique NameFE659251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length281
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659251 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 5.098e-44
Identity = 80/93 (86.02%), Postives = 88/93 (94.62%), Query Frame = -2
Query:    2 TVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTE 280
            TVYATA+DPKKGSLGTIAPIAIGFIVGANIL GGAFDGASMNPAVSFGPALVSWSW++ WVYWVGPLIGGGLAG++YE  FI+ +HEQLPTT+
Sbjct:  157 TVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWESQWVYWVGPLIGGGLAGVIYEVLFISHTHEQLPTTD 249          
BLAST of FE659251 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.136e-43
Identity = 77/93 (82.80%), Postives = 87/93 (93.55%), Query Frame = -2
Query:    2 TVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTE 280
            TVYATA+DPK GSLGTIAPIAIGFIVGANILAGGAF GASMNPAV+FGPA+VSW+W NHWVYW GPL+GGG+AG++YE FFIN +HEQLPTT+
Sbjct:  158 TVYATAIDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVSWTWTNHWVYWAGPLVGGGIAGLIYEVFFINTTHEQLPTTD 250          
BLAST of FE659251 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 9.614e-43
Identity = 77/93 (82.80%), Postives = 85/93 (91.40%), Query Frame = -2
Query:    2 TVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTE 280
            TVYATA+DPKKG++G IAPIAIGFIVGANIL GGAF GASMNPAVSFGPA+VSWSW NHWVYW GPLIGGG+AG+VYE  FIN +HEQLPTT+
Sbjct:  157 TVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIGGGIAGLVYEVLFINSTHEQLPTTD 249          
BLAST of FE659251 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 9.614e-43
Identity = 77/93 (82.80%), Postives = 85/93 (91.40%), Query Frame = -2
Query:    2 TVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTE 280
            TVYATA+DPKKG++G IAPIAIGFIVGANIL GGAF GASMNPAVSFGPA+VSWSW NHWVYW GPLIGGG+AG+VYE  FIN +HEQLPTT+
Sbjct:  156 TVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIGGGIAGLVYEVLFINSTHEQLPTTD 248          
BLAST of FE659251 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 1.640e-42
Identity = 78/93 (83.87%), Postives = 85/93 (91.40%), Query Frame = -2
Query:    2 TVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTE 280
            TVYATA+DPKKGSLGTIAPIAIGFIVGANIL GGAFDGASMNPAVSFGPALVSW W   WVYWVGPLIGGGLAG++YE  FI+ +HEQLP+T+
Sbjct:  157 TVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWEWGYQWVYWVGPLIGGGLAGVIYELLFISHTHEQLPSTD 249          
BLAST of FE659251 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 3.653e-42
Identity = 78/94 (82.98%), Postives = 88/94 (93.62%), Query Frame = -2
Query:    2 TVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQ-SHEQLPTTE 280
            TVYATA+DPK GSLGTIAPIAIGFIVGANILAGGAF GASMNPAV+FGPA+VSW+W NHWVYW GPLIGGGLAGI+Y+F FI++ +HEQLPTT+
Sbjct:  159 TVYATAVDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVSWTWTNHWVYWAGPLIGGGLAGIIYDFVFIDENAHEQLPTTD 252          
BLAST of FE659251 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 3.538e-37
Identity = 72/93 (77.42%), Postives = 80/93 (86.02%), Query Frame = -2
Query:    5 TVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQ-SHEQLPTT 280
            TVYATA+DPKKG LG IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA+V+  W+NHWVYWVGPL G  +A +VY+  FI Q  H+QLPTT
Sbjct:  158 TVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGVWENHWVYWVGPLAGAAIAALVYDIIFIGQRPHQQLPTT 250          
BLAST of FE659251 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 7.883e-37
Identity = 69/94 (73.40%), Postives = 80/94 (85.11%), Query Frame = -2
Query:    2 TVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQ-SHEQLPTTE 280
            TVYATA+DPKKG LG IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA+V+  WDNHWVYW+GP +G  +A ++Y+  FI Q  H+QLPT +
Sbjct:  158 TVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGVWDNHWVYWLGPFVGAAIAALIYDIIFIGQRPHDQLPTAD 251          
BLAST of FE659251 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.487e-35
Identity = 68/94 (72.34%), Postives = 77/94 (81.91%), Query Frame = -2
Query:    2 TVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFI-NQSHEQLPTTE 280
            TVYATA+DPKKG +G IAP+AIG IVGANIL GGAFDGASMNPAVSFGPA+VSW W NHWVYWVGP IG  +A IVY+  FI +  HE LP+ +
Sbjct:  158 TVYATAVDPKKGDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVVSWIWTNHWVYWVGPFIGAAIAAIVYDTIFIGSNGHEPLPSND 251          
BLAST of FE659251 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.009e-32
Identity = 59/86 (68.60%), Postives = 70/86 (81.40%), Query Frame = -2
Query:   20 VYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 277
            VY+TA+DPK+GS+G IAP+AIG IVGANIL GG FDGASMNPA +FGPALV W W NHW+YWVGP IGG LA ++YE+  I   +E
Sbjct:  167 VYSTAIDPKRGSIGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALVGWRWSNHWIYWVGPFIGGALAALIYEYMIIPSVNE 252          
The following BLAST results are available for this feature:
BLAST of FE659251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
TIP11_ORYSJ5.098e-4486.02Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
TIP11_ARATH1.136e-4382.80Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
TIP1_MEDTR9.614e-4382.80Probable aquaporin TIP-type OS=Medicago truncatula... [more]
TIP1_MEDSA9.614e-4382.80Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
TIP11_MAIZE1.640e-4283.87Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1[more]
TIP12_ARATH3.653e-4282.98Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]
TIP12_MAIZE3.538e-3777.42Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
TIP12_ORYSJ7.883e-3773.40Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
TIP13_ARATH1.487e-3572.34Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
TIP32_ARATH2.009e-3268.60Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank description257 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659251 ID=FE659251; Name=FE659251; organism=Citrus sinensis; type=EST; length=281bp
ACTCGGTTGTTGGGAGCTGCTCGTGAGACTGGTTAATGAAGAAGAACTCG
TAGACGATGCCAGCTAGCCCACCACCGATGAGTGGCCCGACCCAGTAGAC
CCAGTGGTTGTCCCAGCTCCAGCTTACCAAAGCTGGCCCAAATGACACTG
CTGGGTTCATTGAAGCTCCATCAAACGCCCCGCCCGCCAAGATGTTGGCT
CCTACAATGAAACCAATTGCAATTGGTGCAATTGTCCCCAAGCTTCCCTT
CTTTGGGTCCAGGGCTGTGGCATACACTGTG
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