FE659190

Overview
NameFE659190
Unique NameFE659190
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length342
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659190 vs. ExPASy Swiss-Prot
Match: LAX5_MEDTR (Auxin transporter-like protein 5 OS=Medicago truncatula GN=LAX5 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.442e-14
Identity = 33/51 (64.71%), Postives = 38/51 (74.51%), Query Frame = -1
Query:  190 LVVGFGLGGWASMTNFIKQVDTFGLFAKCYQCPPPTSATAH*LWAHPTLPP 342
            L+VGFG GGWASM NF+ Q+DTFGLF KCYQCPPPT +        PT+PP
Sbjct:  432 LIVGFGFGGWASMVNFVHQIDTFGLFTKCYQCPPPTPSV-------PTMPP 475          
BLAST of FE659190 vs. ExPASy Swiss-Prot
Match: LAX2_ORYSJ (Auxin transporter-like protein 2 OS=Oryza sativa subsp. japonica GN=Os05g0447200 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.883e-14
Identity = 37/53 (69.81%), Postives = 40/53 (75.47%), Query Frame = -1
Query:  184 LVVGFGLGGWASMTNFIKQVDTFGLFAKCYQCPPPTSATAH*LWAHPTLPPKH 342
            LVVGFGLGGWAS+TNFIKQ+DTFGLFAKCYQCPP   A      A    PP+H
Sbjct:  435 LVVGFGLGGWASVTNFIKQIDTFGLFAKCYQCPPRAHA-----GAPLPAPPRH 482          
BLAST of FE659190 vs. ExPASy Swiss-Prot
Match: LAX1_MEDTR (Auxin transporter-like protein 1 OS=Medicago truncatula GN=LAX1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.883e-14
Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = -1
Query:  220 VVGFGLGGWASMTNFIKQVDTFGLFAKCYQCPPPTSATAH 339
            +VGFG GGWASMTNFIKQVDTFGLFAKCYQCPP   A+ H
Sbjct:  436 IVGFGFGGWASMTNFIKQVDTFGLFAKCYQCPPKLPASNH 475          
BLAST of FE659190 vs. ExPASy Swiss-Prot
Match: LAX4_MEDTR (Auxin transporter-like protein 4 OS=Medicago truncatula GN=LAX4 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.211e-14
Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = -1
Query:  223 LVVGFGLGGWASMTNFIKQVDTFGLFAKCYQCPPPTSATA 342
            LVVGFG GGWASMTNFI+Q+DTFGLFAKCYQC PPT   A
Sbjct:  436 LVVGFGFGGWASMTNFIRQIDTFGLFAKCYQCKPPTPPQA 475          
BLAST of FE659190 vs. ExPASy Swiss-Prot
Match: LAX1_ORYSJ (Auxin transporter-like protein 1 OS=Oryza sativa subsp. japonica GN=Os01g0856500 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 4.194e-14
Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = -1
Query:  223 LVVGFGLGGWASMTNFIKQVDTFGLFAKCYQCPPPTSATA 342
            LVVGFGLGGWASM NFI+Q+DTFGLFAKCYQCP P  A A
Sbjct:  444 LVVGFGLGGWASMVNFIRQIDTFGLFAKCYQCPKPAPALA 483          
BLAST of FE659190 vs. ExPASy Swiss-Prot
Match: LAX2_MEDTR (Auxin transporter-like protein 2 OS=Medicago truncatula GN=LAX2 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.478e-14
Identity = 37/54 (68.52%), Postives = 39/54 (72.22%), Query Frame = -1
Query:  184 LVVGFGLGGWASMTNFIKQVDTFGLFAKCYQC-PPPTSATAH*LWAHPTLPPKH 342
            LVVGFG GGWASMTNFI+Q+DTFGLFAKCYQC PPP  A A         PP H
Sbjct:  436 LVVGFGFGGWASMTNFIRQIDTFGLFAKCYQCKPPPVMAAA---------PPPH 480          
BLAST of FE659190 vs. ExPASy Swiss-Prot
Match: LAX3_ORYSJ (Auxin transporter-like protein 3 OS=Oryza sativa subsp. japonica GN=Os10g0147400 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.594e-13
Identity = 32/40 (80.00%), Postives = 35/40 (87.50%), Query Frame = -1
Query:  223 LVVGFGLGGWASMTNFIKQVDTFGLFAKCYQCPPPTSATA 342
            LVVGFG GGWAS+TNF+ QVDTFGLFAKCYQCPP  +A A
Sbjct:  451 LVVGFGFGGWASITNFVHQVDTFGLFAKCYQCPPHPAAAA 490          
BLAST of FE659190 vs. ExPASy Swiss-Prot
Match: LAX1_ARATH (Auxin transporter-like protein 1 OS=Arabidopsis thaliana GN=LAX1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.082e-13
Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = -1
Query:  223 LVVGFGLGGWASMTNFIKQVDTFGLFAKCYQCPPPTSATA 342
            LV+GFG GGWASMTNFI+Q+DTFGLFAKCYQC PP +  A
Sbjct:  442 LVLGFGFGGWASMTNFIRQIDTFGLFAKCYQCKPPPAPIA 481          
BLAST of FE659190 vs. ExPASy Swiss-Prot
Match: AUX1_ARATH (Auxin transporter protein 1 OS=Arabidopsis thaliana GN=AUX1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.033e-12
Identity = 31/41 (75.61%), Postives = 36/41 (87.80%), Query Frame = -1
Query:  220 LVVGFGLGGWASMTNFIKQVDTFGLFAKCYQCPPPTSATAH 342
            L+VGFG GGWAS+TNF++QVDTFGLFAKCYQC  P +A AH
Sbjct:  436 LIVGFGFGGWASVTNFVRQVDTFGLFAKCYQC-KPAAAAAH 475          
BLAST of FE659190 vs. ExPASy Swiss-Prot
Match: LAX2_ARATH (Auxin transporter-like protein 2 OS=Arabidopsis thaliana GN=LAX2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.006e-12
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = -1
Query:  238 VVGFGLGGWASMTNFIKQVDTFGLFAKCYQCPPP 339
            +VGFG GGWASM NF+ Q+DTFGLF KCYQCPPP
Sbjct:  431 IVGFGFGGWASMINFVHQIDTFGLFTKCYQCPPP 464          
The following BLAST results are available for this feature:
BLAST of FE659190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
LAX5_MEDTR1.442e-1464.71Auxin transporter-like protein 5 OS=Medicago trunc... [more]
LAX2_ORYSJ1.883e-1469.81Auxin transporter-like protein 2 OS=Oryza sativa s... [more]
LAX1_MEDTR1.883e-1482.50Auxin transporter-like protein 1 OS=Medicago trunc... [more]
LAX4_MEDTR3.211e-1482.50Auxin transporter-like protein 4 OS=Medicago trunc... [more]
LAX1_ORYSJ4.194e-1482.50Auxin transporter-like protein 1 OS=Oryza sativa s... [more]
LAX2_MEDTR5.478e-1468.52Auxin transporter-like protein 2 OS=Medicago trunc... [more]
LAX3_ORYSJ1.594e-1380.00Auxin transporter-like protein 3 OS=Oryza sativa s... [more]
LAX1_ARATH2.082e-1377.50Auxin transporter-like protein 1 OS=Arabidopsis th... [more]
AUX1_ARATH1.033e-1275.61Auxin transporter protein 1 OS=Arabidopsis thalian... [more]
LAX2_ARATH3.006e-1279.41Auxin transporter-like protein 2 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank description91 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659190 ID=FE659190; Name=FE659190; organism=Citrus sinensis; type=EST; length=342bp
ACTGTGTGAATGATACAACACCAAATCCAAAATCTCCTATAGAATTATTC
TTTATAATTATATTGGGAAATTGTAGGCTAAACTTAATAAGAAAATATAA
CATGCACAAGCATCTAATATTGACATAGAAATGTTGAACAAATAACAAAA
GGGGAAAATACAAGAAACCAGAAGACGTTAGAAATGCTTTGGTGGTAATG
TGGGGTGGGCCCATAATCAGTGAGCAGTAGCTGAGGTTGGCGGTGGGCAC
TGATAGCACTTGGCAAAGAGTCCAAATGTGTCGACTTGCTTGATGAAGTT
GGTCATACTAGCCCAGCCTCCTAGTCCAAACCCAACCACTAG
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