FE659164

Overview
NameFE659164
Unique NameFE659164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length202
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:445..646. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.042e-24
Identity = 57/65 (87.69%), Postives = 58/65 (89.23%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARKLSLTRA+FYMVMQCLGAICGAGVVKGFM  G Y RL GGANVV  GYTKGDGLGAEII
Sbjct:  121 GLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFM-VGPYQRLGGGANVVNPGYTKGDGLGAEII 184          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 2.949e-23
Identity = 53/65 (81.54%), Postives = 57/65 (87.69%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARKLSLTRA+FYMVMQ LGAICGAGVVKGF G  ++G L GGAN VA GYTKGDGLGAEI+
Sbjct:  123 GLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIV 187          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 2.949e-23
Identity = 55/65 (84.62%), Postives = 56/65 (86.15%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGF   G Y    GGANVVA GYTKGDGLGAEI+
Sbjct:  122 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQ-KGLYETTGGGANVVAPGYTKGDGLGAEIV 185          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 5.030e-23
Identity = 54/65 (83.08%), Postives = 56/65 (86.15%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARKLSLTRALFY+VMQCLGAICGAGVVKGF   G Y    GGANVVAHGYTKG GLGAEI+
Sbjct:  121 GLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQ-PGLYQTNGGGANVVAHGYTKGSGLGAEIV 184          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.030e-23
Identity = 54/65 (83.08%), Postives = 56/65 (86.15%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARKLSLTRAL+Y+VMQCLGAICGAGVVKGF    QY  L GGAN VAHGYTKG GLGAEII
Sbjct:  120 GLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQ-PKQYQALGGGANTVAHGYTKGSGLGAEII 183          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.030e-23
Identity = 54/65 (83.08%), Postives = 56/65 (86.15%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARKLSLTRAL+Y+VMQCLGAICGAGVVKGF    QY  L GGAN VAHGYTKG GLGAEII
Sbjct:  120 GLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQ-PKQYQALGGGANTVAHGYTKGSGLGAEII 183          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.580e-23
Identity = 53/65 (81.54%), Postives = 55/65 (84.62%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARKLSLTRA+FYM+MQCLGAICGAGVVKGF     Y  L GGAN VAHGYTKG GLGAEII
Sbjct:  121 GLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPT-PYQTLGGGANTVAHGYTKGSGLGAEII 184          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.464e-22
Identity = 53/65 (81.54%), Postives = 55/65 (84.62%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARKLSLTRA+FY+VMQCLGAICGAGVVKGF     Y  L GGAN VAHGYTKG GLGAEII
Sbjct:  120 GLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQ-PNPYQTLGGGANTVAHGYTKGSGLGAEII 183          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.464e-22
Identity = 52/65 (80.00%), Postives = 56/65 (86.15%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARKLSLTRA++Y+VMQCLGAICGAGVVKGF    QY  L GGAN +AHGYTKG GLGAEII
Sbjct:  120 GLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQ-PKQYQALGGGANTIAHGYTKGSGLGAEII 183          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.261e-22
Identity = 53/65 (81.54%), Postives = 56/65 (86.15%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARKLSLTRA+FY+VMQCLGAICGAGVVKGF   G Y    GGANVVA GYTKGDGLGAEI+
Sbjct:  123 GLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQ-QGLYMGNGGGANVVASGYTKGDGLGAEIV 186          
The following BLAST results are available for this feature:
BLAST of FE659164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
PIP1_SOLLC2.042e-2487.69Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP2_PEA2.949e-2381.54Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP12_ORYSJ2.949e-2384.62Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP15_ARATH5.030e-2383.08Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP11_VICFA5.030e-2383.08Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH5.030e-2383.08Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP14_ARATH8.580e-2381.54Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP13_ARATH1.464e-2281.54Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP12_ARATH1.464e-2280.00Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP11_ORYSJ3.261e-2281.54Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]

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Properties
Property NameValue
Genbank description13 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659164 ID=FE659164; Name=FE659164; organism=Citrus sinensis; type=EST; length=202bp
CACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTC
TACATGGTGATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAA
GGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACG
TCGTAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATT
GG
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