FE659151

Overview
NameFE659151
Unique NameFE659151
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length259
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:513..771. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659151 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.245e-28
Identity = 60/86 (69.77%), Postives = 66/86 (76.74%), Query Frame = -2
Query:    1 HDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXVKFAKAMGVKVTVIS 258
            +DG+ TYGGYSDIMVADEHF+VRIP+  PLD  APLLCAGIT YSPLR++GLDKPGM              VKFAKAMGVKVTVIS
Sbjct:  127 YDGSTTYGGYSDIMVADEHFIVRIPDNLPLDGAAPLLCAGITTYSPLRYFGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIS 212          
BLAST of FE659151 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.182e-25
Identity = 56/86 (65.12%), Postives = 64/86 (74.42%), Query Frame = -2
Query:    1 HDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXVKFAKAMGVKVTVIS 258
            +D TITYGGYSD MV +E FV+RIP+  PLDA APLLCAGITVYSP++++GLDKPGM              VKFAKAMG KVTVIS
Sbjct:  125 YDNTITYGGYSDHMVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKPGMHIGVVGLGGLGHVGVKFAKAMGTKVTVIS 210          
BLAST of FE659151 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.428e-25
Identity = 56/85 (65.88%), Postives = 62/85 (72.94%), Query Frame = -2
Query:    1 DGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXVKFAKAMGVKVTVIS 255
            DGTI  GGYSDIMVADEHF++R PE  PLDA APLLCAGIT YSPL+++GLDKPG+              VKFAKA G KVTVIS
Sbjct:  130 DGTIARGGYSDIMVADEHFIIRWPENFPLDAGAPLLCAGITTYSPLKYFGLDKPGLRVGVNGLGGLGHVAVKFAKAFGTKVTVIS 214          
BLAST of FE659151 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.063e-24
Identity = 54/86 (62.79%), Postives = 62/86 (72.09%), Query Frame = -2
Query:    1 HDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXVKFAKAMGVKVTVIS 258
            +DGT+TYGGYSDIMV +EHF VRIP+   LDATAPLLCAG+TVYSPL+ + LDKPG+              VKF KA G KVTVIS
Sbjct:  130 YDGTLTYGGYSDIMVVEEHFAVRIPDNMALDATAPLLCAGVTVYSPLKHFELDKPGLHIGVVGLGGLGHMAVKFGKAFGAKVTVIS 215          
BLAST of FE659151 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.635e-23
Identity = 53/85 (62.35%), Postives = 60/85 (70.59%), Query Frame = -2
Query:    1 DGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXVKFAKAMGVKVTVIS 255
            DG+ITYGGY+D MVAD+HFV+R PE  PLD+ APLLCAGIT YSPLR++GLDKPG               VK AKA G  VTVIS
Sbjct:  107 DGSITYGGYADSMVADQHFVLRWPENLPLDSGAPLLCAGITTYSPLRYHGLDKPGTKVGVVGLGGLGHVAVKMAKAFGAHVTVIS 191          
BLAST of FE659151 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 6.635e-23
Identity = 51/85 (60.00%), Postives = 61/85 (71.76%), Query Frame = -2
Query:    1 DGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXVKFAKAMGVKVTVIS 255
            D T+T+GGYSD MV  E F++RIP+  PLD  APLLCAG+TVYSP++++GLDKPGM              VKFAKAMG KVTVIS
Sbjct:  126 DDTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGLDKPGMHIGVVGLGGLGHVAVKFAKAMGTKVTVIS 210          
BLAST of FE659151 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.132e-22
Identity = 51/84 (60.71%), Postives = 60/84 (71.43%), Query Frame = -2
Query:    4 DGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXVKFAKAMGVKVTVI 255
            DGT+T+GGYSD MVADEHF++R P+  PLD+ APLLCAGIT YSPL++YGLDKPG               VK AKA G +VTVI
Sbjct:  130 DGTMTHGGYSDTMVADEHFILRWPKNLPLDSGAPLLCAGITTYSPLKYYGLDKPGTKIGVVGLGGLGHVAVKMAKAFGAQVTVI 213          
BLAST of FE659151 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.082e-20
Identity = 47/85 (55.29%), Postives = 58/85 (68.24%), Query Frame = -2
Query:    1 DGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXVKFAKAMGVKVTVIS 255
            DGT+TYGGYS ++V  E FVV  PE  PLD  APLLCAGITVY+P++++GL+ PG               VKFA+A G+KVTVIS
Sbjct:  133 DGTVTYGGYSSMVVVHERFVVMFPEAMPLDVGAPLLCAGITVYTPMKYHGLNAPGKHVGVLGLGGLGHVAVKFARAFGLKVTVIS 217          
BLAST of FE659151 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 5.258e-20
Identity = 48/85 (56.47%), Postives = 57/85 (67.06%), Query Frame = -2
Query:    1 DGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXVKFAKAMGVKVTVIS 255
            DGT+TYGGYS ++V  E FVVR PE  PLD  APLLCAGITVYSP++++GL+ P                VKFAKA G+ VTVIS
Sbjct:  123 DGTVTYGGYSSMVVVHERFVVRFPEAMPLDKGAPLLCAGITVYSPMKYHGLNVPSKHVGVLGLGGLGHVAVKFAKAFGMTVTVIS 207          
BLAST of FE659151 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.968e-20
Identity = 45/86 (52.33%), Postives = 58/86 (67.44%), Query Frame = -2
Query:    1 HDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXVKFAKAMGVKVTVIS 258
            + GT TYGGYSD +V  + +VV+ P+  PLDA APLLCAGITVYSP+++YG+ +PG               +KF KA G+KVTVIS
Sbjct:  128 YKGTRTYGGYSDFVVVHQRYVVQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVIS 213          
The following BLAST results are available for this feature:
BLAST of FE659151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
MTDH_FRAAN5.245e-2869.77Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
CADH8_ARATH3.182e-2565.12Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
GEDH1_OCIBA5.428e-2565.88Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
MTDH_MESCR2.063e-2462.79Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
MTDH_PETCR6.635e-2362.35Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
CADH7_ARATH6.635e-2360.00Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
MTDH_APIGR1.132e-2260.71Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]
CADH3_ORYSJ3.082e-2055.29Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
CADH5_ORYSJ5.258e-2056.47Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
MTDH_MEDSA8.968e-2052.33Probable mannitol dehydrogenase OS=Medicago sativa... [more]

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Properties
Property NameValue
Genbank descriptionC90 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659151 ID=FE659151; Name=FE659151; organism=Citrus sinensis; type=EST; length=259bp
ACTGATCACAGTCACCTTGACCCCCATAGCCTTTGCGAATTTGACGGCGA
CATGGCCTAGACCGCCCAAGCCGACAACACCCACATGCATACCAGGCTTG
TCGAGTCCATAGAATCTCAACGGACTGTAGACTGTGATACCAGCACAGAG
GAGAGGGGCAGTGGCGTCAAGTGGTGTGCCTTCAGGAATACGGACCACAA
AGTGCTCATCGGCAACCATAATGTCAGAGTAGCCTCCGTATGTGATGGTT
CCATCATGG
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