FC923089

Overview
NameFC923089
Unique NameFC923089
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length374
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1868 contig Csv1_Contig1868:217..590. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC923089 vs. ExPASy Swiss-Prot
Match: ARG2_PHAAU (Indole-3-acetic acid-induced protein ARG2 OS=Phaseolus aureus GN=ARG2 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.639e-11
Identity = 35/77 (45.45%), Postives = 42/77 (54.55%), Query Frame = 3 
Query:    3 GISNAIYKRGYSAASQXXXXXXXXXXXXXXXMLKKPAEEMTGSSEKVSWVPDPVTGVYRPENLANELDGADLRAMFL 233
            G SN   + G++AA+                M+ K  EE     EKVSWVPDPVTG YRPEN  NE+D AD+RA  L
Sbjct:   18 GFSNTTTRHGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPEN-TNEIDVADMRATVL 93
The following BLAST results are available for this feature:
BLAST of FC923089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ARG2_PHAAU9.639e-1145.45Indole-3-acetic acid-induced protein ARG2 OS=Phase... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM3BH10RM1 SLH Citrus sinensis cDNA clone KN0AAM3BH10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923089 ID=FC923089; Name=FC923089; organism=Citrus sinensis; type=EST; length=374bp
ACGGAATCTCTAACGCCATCTACAAAAGAGGATACTCGGCGGCATCACAA
GGCGCTGTGTCGCGGGCAACAGGGGGAGCTAGGAGTGCTGCTGCGATGTT
GAAGAAACCAGCAGAAGAGATGACAGGATCCAGTGAGAAGGTCTCGTGGG
TCCCAGACCCAGTCACTGGTGTCTACAGGCCGGAGAATCTCGCCAACGAG
CTCGATGGGGCCGACCTCAGAGCCATGTTCTTGAAGCACAACAACTGATC
ATCAAAATTAATAAGTATTATTATTAATATATATTAATTCGGACATGGAA
ACTGAGGAAGGACGAAAGAAAAATTAAAAAAAGGTTAAAAAGGGATTTGT
TCTGATGTGGTCAGCCGCATGAGC
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