EY720461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720461 vs. ExPASy Swiss-Prot
Match: NDHM_POPJC (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Populus jackii GN=ndhM PE=2 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 2.800e-71 Identity = 138/201 (68.66%), Postives = 151/201 (75.12%), Query Frame = 1 Query: 142 MATTSINMASAKFSMLGWIGGKRELKKKRVISISXXXXXXXXXXXXXXXXXXXXXAQVKQQQTPLRPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYYGSCYMTGEIXYNMGCRVLNFSMGKPRIMFNNN 744 MA +S MA AKFSMLGW+GG+RELK +RVIS+S +VKQ P RPVEPQ NV+SKNM REYGGQWLS TRHVRIYAAYIDPET EFDQTQ DKLTLILDPT EFVWTDE+C KV++YFQELVDHYEGA LTEYTLRLIGSD+EHY GEI YNM RVLNFSMGKPRI+FNN+ Sbjct: 1 MAASSSYMACAKFSMLGWLGGRRELKMRRVISVSPQEQAEVQESQEVNAQEEE---KVKQPVQP-RPVEPQVNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPETCEFDQTQTDKLTLILDPTDEFVWTDETCYKVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKYNMNARVLNFSMGKPRILFNND 197
BLAST of EY720461 vs. ExPASy Swiss-Prot
Match: NDHM_VITVI (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Vitis vinifera GN=ndhM PE=2 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 4.043e-70 Identity = 136/201 (67.66%), Postives = 146/201 (72.64%), Query Frame = 1 Query: 142 MATTSINMASAKFSMLGWIGGKRELKKKRVISISXXXXXXXXXXXXXXXXXXXXXAQVKQQQTPL-RPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYYGSCYMTGEIXYNMGCRVLNFSMGKPRIMFNN 741 MA TS A KFSMLGWIGGKREL+K+R IS +Q + L RPVEPQ NV+SKNMSREYGGQWLS TRHVRIYAAYIDP T EFDQTQMDKLTLILDPT EFVWT E+CNKV+AYFQELVDHYEGA LTEYTLRLIGSD+EHY GEI YNM RVLNFSMGKPRI+FN+ Sbjct: 1 MAATSSYTACTKFSMLGWIGGKRELRKRRAFFISAQQQAEVEESQQVNAQEEEQEKMKQQGKQKLPRPVEPQVNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPTNEFVWTSETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKYNMNARVLNFSMGKPRILFND 201
BLAST of EY720461 vs. ExPASy Swiss-Prot
Match: NDHM_ARATH (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Arabidopsis thaliana GN=ndhM PE=2 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 5.477e-59 Identity = 109/147 (74.15%), Postives = 123/147 (83.67%), Query Frame = 1 Query: 310 QVKQQQTPLRPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYYGSCYMTGEIXYNMGCRVLNFSMGKPRIMFNNNEL 750 ++K+Q TPLRPVE Q NV+SK M ++GGQWLS TRHVRIYAAYIDPET EFDQ+QMDKLTLILDPT+EFVW DESCNKV++YFQELVDHYEGA LTEYTLRLIGSD+EHY GEI YNM RVLNFSMGKPR+ FN + + Sbjct: 60 KMKKQPTPLRPVEKQLNVKSKGMG-DFGGQWLSSVTRHVRIYAAYIDPETCEFDQSQMDKLTLILDPTEEFVWDDESCNKVYSYFQELVDHYEGAPLTEYTLRLIGSDVEHYIRKMLFDGEIQYNMDARVLNFSMGKPRVQFNTSNI 205
BLAST of EY720461 vs. ExPASy Swiss-Prot
Match: NDHM_ORYSJ (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. japonica GN=ndhM PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.673e-55 Identity = 102/145 (70.34%), Postives = 118/145 (81.38%), Query Frame = 1 Query: 319 QQQTPLRPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYYGSCYMTGEIXYNMGCRVLNFSMGKPRIMFNNNELP 753 ++Q P +P+ Q SKNMSREYGGQWLSC TRH+RIYAAYI+PET FDQTQMDKLTL+LDPT EFVWTDE+C KV+ FQ+LVDHYEGA L+EYTLRLIGSDLEH+ GEI YNM RVLNFSMGKPRI FN++++P Sbjct: 73 RRQGPAQPLPVQPLAESKNMSREYGGQWLSCTTRHIRIYAAYINPETNAFDQTQMDKLTLLLDPTDEFVWTDETCQKVYDEFQDLVDHYEGAELSEYTLRLIGSDLEHFIRKLLYDGEIKYNMMSRVLNFSMGKPRIKFNSSQIP 217
BLAST of EY720461 vs. ExPASy Swiss-Prot
Match: NDHM_ORYSI (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. indica GN=ndhM PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.673e-55 Identity = 102/145 (70.34%), Postives = 118/145 (81.38%), Query Frame = 1 Query: 319 QQQTPLRPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYYGSCYMTGEIXYNMGCRVLNFSMGKPRIMFNNNELP 753 ++Q P +P+ Q SKNMSREYGGQWLSC TRH+RIYAAYI+PET FDQTQMDKLTL+LDPT EFVWTDE+C KV+ FQ+LVDHYEGA L+EYTLRLIGSDLEH+ GEI YNM RVLNFSMGKPRI FN++++P Sbjct: 73 RRQGPAQPLPVQPLAESKNMSREYGGQWLSCTTRHIRIYAAYINPETNAFDQTQMDKLTLLLDPTDEFVWTDETCQKVYDEFQDLVDHYEGAELSEYTLRLIGSDLEHFIRKLLYDGEIKYNMMSRVLNFSMGKPRIKFNSSQIP 217
BLAST of EY720461 vs. ExPASy Swiss-Prot
Match: NDHM_PHYPA (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Physcomitrella patens GN=ndhM PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 2.091e-42 Identity = 82/132 (62.12%), Postives = 99/132 (75.00%), Query Frame = 1 Query: 334 LRPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYYGSCYMTGEIXYNMGCRVLNFSMGKPRI 729 +R E + ++K +SRE GGQWLSC TRHVRIYA Y+DPET DQ+Q+DKLTL+LDP EF W +E KV+ ++ELV+ Y GA LTEYTLRLIGSDLEHY + GE+ YN+ CRVLNFSMGKPRI Sbjct: 61 VRAEEVKEVTQAKGLSRESGGQWLSCTTRHVRIYAGYVDPETQVMDQSQLDKLTLMLDPDNEFEWPEEMVEKVYDKYRELVETYAGADLTEYTLRLIGSDLEHYIRKLLLAGELKYNLDCRVLNFSMGKPRI 192
BLAST of EY720461 vs. ExPASy Swiss-Prot
Match: NDHM_GLOVI (NAD(P)H-quinone oxidoreductase subunit M OS=Gloeobacter violaceus GN=ndhM PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.010e-20 Identity = 53/109 (48.62%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 403 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYYGSCYMTGEIXYNMGCRVLNFSMGKPRI 729 L TRHV I+AA I + + T KLTL +DP EF+W D + KV++ F LV Y G LTEY LR IGSDLE++ GEI YN+ RVLNFSMG+P++ Sbjct: 2 LKSTTRHVHIFAADIRNDNFIASDT---KLTLDVDPDNEFIWNDPALQKVYSEFDRLVAAYTGLALTEYNLRRIGSDLENFIRGLLQQGEIAYNLDSRVLNFSMGRPQV 107
BLAST of EY720461 vs. ExPASy Swiss-Prot
Match: NDHM_NOSP7 (NAD(P)H-quinone oxidoreductase subunit M OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ndhM PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.319e-20 Identity = 52/116 (44.83%), Postives = 71/116 (61.21%), Query Frame = 1 Query: 403 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYYGSCYMTGEIXYNMGCRVLNFSMGKPRIMFNNNEL 750 L TRHVRI+A ID + Q+ LTL +DP EF W +++ KV+ F ELV+ GA LT+Y LR +GSDLEHY S GEI YN+ RV N+SMG P++ ++ ++ Sbjct: 7 LKSTTRHVRIFAGEIDRDGDLVPSQQV--LTLDIDPDNEFNWNEDALQKVYRKFDELVEASSGADLTDYNLRRVGSDLEHYLRSLLQLGEISYNLSARVTNYSMGVPQVAIDDKQV 120
BLAST of EY720461 vs. ExPASy Swiss-Prot
Match: NDHM_SYNJB (NAD(P)H-quinone oxidoreductase subunit M OS=Synechococcus sp. GN=ndhM PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.722e-20 Identity = 53/109 (48.62%), Postives = 66/109 (60.55%), Query Frame = 1 Query: 403 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYYGSCYMTGEIXYNMGCRVLNFSMGKPRI 729 L C TRHV I+A + + + D TL +DP E VWTD + KV+A F+ELV+ Y G LTEY +R IGSDLEH+ S GEI YN+ R NFSMG P+I Sbjct: 2 LKCTTRHVHIFAGEVTADNNFVPRD--DLFTLDVDPDNELVWTDAALQKVYARFEELVEEYRGRDLTEYNIRRIGSDLEHFIRSLLKQGEIAYNLQGRAPNFSMGFPQI 108
BLAST of EY720461 vs. ExPASy Swiss-Prot
Match: NDHM_SYNJA (NAD(P)H-quinone oxidoreductase subunit M OS=Synechococcus sp. (strain JA-3-3Ab) GN=ndhM PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.722e-20 Identity = 53/109 (48.62%), Postives = 66/109 (60.55%), Query Frame = 1 Query: 403 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYYGSCYMTGEIXYNMGCRVLNFSMGKPRI 729 L C TRHV I+A + + + D LTL +DP E VW D + KV+A F+ELV+ Y G LTEY LR IGSDLEH+ S GEI YN+ R N+SMG P+I Sbjct: 2 LKCTTRHVHIFAGEVTADNHFVPRD--DLLTLDVDPDNELVWNDAALQKVYARFEELVEEYRGRDLTEYNLRRIGSDLEHFIRSLLKQGEIAYNLQGRTPNYSMGFPQI 108 The following BLAST results are available for this feature:
BLAST of EY720461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720461 ID=EY720461; Name=EY720461; organism=Citrus sinensis; type=EST; length=882bpback to top |