FC923085

Overview
NameFC923085
Unique NameFC923085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: 6DCS_SOYBN (NAD(P)H-dependent 6'-deoxychalcone synthase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.190e-25
Identity = 56/109 (51.38%), Postives = 82/109 (75.23%), Query Frame = 3
Query:    6 MPVYINVPGVKLSSASAGREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLR 332
            M   I +P +   ++SA + MPV+G+G+A D   +   K A++EA+K GYRHFDTA+ YG+E+ALGEA+ EA+ LGL+ +RQDLF+T+KLW+ + H  LV+PAL+KSL+
Sbjct:    1 MAAAIEIPTIVFPNSSAQQRMPVVGMGSAPDFTCKKDTKEAIIEAVKQGYRHFDTAAAYGSEQALGEALKEAIHLGLV-SRQDLFVTSKLWVTENHPHLVLPALRKSLK 108          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: NADO1_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os10g0113000 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.164e-17
Identity = 42/90 (46.67%), Postives = 61/90 (67.78%), Query Frame = 3
Query:   66 MPVIGLGTAVDK-KDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLR 332
            MP +G+GTA            A++ AI+LGYRHFDTA  Y TE  +GEA+ EA++ GL+ +R D+F+T+K+W +D H   VVPA +++LR
Sbjct:   16 MPRVGMGTAAFPFTSSEDTTAAMLRAIELGYRHFDTARIYATEGCVGEAVAEAVRRGLIASRADVFVTSKIWCSDLHAGRVVPAARETLR 105          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: NADO2_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=Os10g0113100 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.596e-16
Identity = 43/90 (47.78%), Postives = 60/90 (66.67%), Query Frame = 3
Query:   66 MPVIGLGTAVDK-KDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLR 332
            MP IG+GTA            A++ AI+LGYRHFDTA  Y TE  + EA+ EA++ GL+ +R D+F+T+KLW +D H   VVPA +++LR
Sbjct:   18 MPRIGMGTAAFPFTSSEETTAALLRAIELGYRHFDTARLYATEGCVSEAVAEAVRRGLVASRADVFVTSKLWCSDLHAGRVVPAARETLR 107          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: S6PD_MALDO (NADP-dependent D-sorbitol-6-phosphate dehydrogenase OS=Malus domestica GN=S6PDH PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.351e-15
Identity = 49/93 (52.69%), Postives = 64/93 (68.82%), Query Frame = 3
Query:   51 SAGREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSL 329
            S+G EMPVIGLG    +KDE  +K  ++ AIK+GYRHFD A+ Y +E  +GEA+ EA K GL+  R++LFITTK+W +D     VV A K SL
Sbjct:    7 SSGYEMPVIGLGLWRLEKDE--LKEVILNAIKIGYRHFDCAAHYKSEADVGEALAEAFKTGLV-KREELFITTKIWNSD--HGHVVEACKNSL 94          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: AK1A1_BOVIN (Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.765e-15
Identity = 42/91 (46.15%), Postives = 60/91 (65.93%), Query Frame = 3
Query:   57 GREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSL 329
            G++MP+IGLGT   K D   +K A+  A+ +GYRH D A+ YG E  +GEA+ E +  G L  R++LF+T+KLW    H + V PAL+K+L
Sbjct:   11 GQKMPLIGLGTW--KSDPGQVKAAIKYALSVGYRHIDCAAIYGNETEIGEALKENVGPGKLVPREELFVTSKLWNTKHHPEDVEPALRKTL 99          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: AK1A1_MOUSE (Alcohol dehydrogenase [NADP+] OS=Mus musculus GN=Akr1a1 PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 2.305e-15
Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = 3
Query:   57 GREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSL 329
            G++MP+IGLGT   K +   +K A+  A+  GYRH D AS YG E  +GEA+ E++  G    R++LF+T+KLW    H + V PAL+K+L
Sbjct:   11 GQKMPLIGLGTW--KSEPGQVKAAIKHALSAGYRHIDCASVYGNETEIGEALKESVGSGKAVPREELFVTSKLWNTKHHPEDVEPALRKTL 99          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: AK1A1_RAT (Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus GN=Akr1a1 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.931e-15
Identity = 40/91 (43.96%), Postives = 60/91 (65.93%), Query Frame = 3
Query:   57 GREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSL 329
            G++MP+IGLGT   K +   +K A+  A+ +GYRH D AS YG E  +GEA+ E++  G    R++LF+T+KLW    H + V PA++K+L
Sbjct:   11 GQKMPLIGLGTW--KSEPGQVKAAIKYALSVGYRHIDCASVYGNETEIGEALKESVGAGKAVPREELFVTSKLWNTKHHPEDVEPAVRKTL 99          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: AK1A1_PIG (Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR1A1 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.951e-14
Identity = 40/91 (43.96%), Postives = 59/91 (64.84%), Query Frame = 3
Query:   57 GREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSL 329
            G++MP+IGLGT   K +   +K A+  A+ +GYRH D A+ YG E  +GEA+ E +  G    R++LF+T+KLW    H + V PAL+K+L
Sbjct:   11 GQKMPLIGLGTW--KSEPGQVKAAIKYALTVGYRHIDCAAIYGNELEIGEALTETVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTL 99          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: AK1A1_HUMAN (Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=AKR1A1 PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 1.951e-14
Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = 3
Query:   57 GREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSL 329
            G++MP+IGLGT   K +   +K AV  A+ +GYRH D A+ YG E  +GEA+ E +  G    R++LF+T+KLW    H + V PAL+K+L
Sbjct:   11 GQKMPLIGLGTW--KSEPGQVKAAVKYALSVGYRHIDCAAIYGNEPEIGEALKEDVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTL 99          
BLAST of FC923085 vs. ExPASy Swiss-Prot
Match: AK1A1_PONAB (Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.548e-14
Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = 3
Query:   57 GREMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSL 329
            G++MP+IGLGT   K +   +K AV  A+ +GYRH D A+ YG E  +GEA+ E +  G    R++LF+T+KLW    H + V PAL+K+L
Sbjct:   11 GQKMPLIGLGTW--KSEPGQVKAAVKYALSVGYRHIDCAAIYGNEPEIGEALKEDVGPGKAVPREELFVTSKLWNTKHHPEDVEPALQKTL 99          
The following BLAST results are available for this feature:
BLAST of FC923085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
6DCS_SOYBN4.190e-2551.38NAD(P)H-dependent 6'-deoxychalcone synthase OS=Gly... [more]
NADO1_ORYSJ7.164e-1746.67Probable NAD(P)H-dependent oxidoreductase 1 OS=Ory... [more]
NADO2_ORYSJ1.596e-1647.78Probable NAD(P)H-dependent oxidoreductase 2 OS=Ory... [more]
S6PD_MALDO1.351e-1552.69NADP-dependent D-sorbitol-6-phosphate dehydrogenas... [more]
AK1A1_BOVIN1.765e-1546.15Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR... [more]
AK1A1_MOUSE2.305e-1545.05Alcohol dehydrogenase [NADP+] OS=Mus musculus GN=A... [more]
AK1A1_RAT3.931e-1543.96Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus... [more]
AK1A1_PIG1.951e-1443.96Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR... [more]
AK1A1_HUMAN1.951e-1445.05Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=A... [more]
AK1A1_PONAB2.548e-1445.05Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM3BH05RM1 SLH Citrus sinensis cDNA clone KN0AAM3BH05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923085 ID=FC923085; Name=FC923085; organism=Citrus sinensis; type=EST; length=670bp
AACAGATGCCTGTTTACATCAACGTCCCAGGAGTGAAACTGAGCTCTGCC
TCCGCTGGGCGGGAGATGCCGGTGATCGGACTGGGCACGGCGGTTGACAA
GAAGGATGAAAATGTCATGAAGTGTGCAGTAATGGAAGCAATCAAGCTCG
GTTACAGACACTTTGACACAGCTTCAGAGTACGGGACAGAGAGGGCTCTT
GGAGAAGCAATCGATGAAGCACTTAAACTTGGGCTTCTCACTACTCGCCA
AGACCTCTTCATTACTACTAAGCTCTGGTTGAATGACGCTCATCGTGACC
TCGTTGTCCCAGCTTTGAAGAAGTCTCTTAGGTAGTACTGGTCCTCATTT
TTTTTAAATAAGTTATATGATTTAATAGTTTGTGCCGACACATTATTAAA
TTATATAACGTTATAATAAATGATTTAATTTTTTAACTTTATTTACTTAA
AACATTAATAAAACTATTCAGCACTAATTTTAAATGATTTAACATGTACT
TACAACAATATAATTAAGTTAAGTTGTAAAAACATTATTTAATATAGTTT
TAATTATTAATTTTTTAGTCATTTATGTTCAATATTGAATTTCACACCTA
AAATAACTTGGAATGAGAATATAATAAAAAAATTATATTCCATAGATACT
ACCAAAAAAAAAAAAAAAAA
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