EY720102

Overview
NameEY720102
Unique NameEY720102
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY720102 vs. ExPASy Swiss-Prot
Match: PUPB_PSEPU (Ferric-pseudobactin BN7/BN8 receptor OS=Pseudomonas putida GN=pupB PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.596e-13
Identity = 44/97 (45.36%), Postives = 61/97 (62.89%), Query Frame = 1 
Query:  292 YDIPAGPLNTALTHFAQEAGVLLSAPGALTQHKRAAGLSATMTVEQGFAELLRGQGLAAVRQADGSYALRQALTADDAGI*TLAAVRVTGAHEFPGS 582
            +DIPAGPL  AL HF Q A +LLS P ALT+ +  +GL+    ++QG A LL G GL A R A+ SY+L+ + +    G   L+AV ++G  + PGS
Sbjct:   53 FDIPAGPLAPALAHFGQSAHILLSYPTALTEGRSTSGLAGRFDIDQGLAILLAGTGLEASRGANASYSLQASAS---TGALELSAVSISG--KAPGS 144
The following BLAST results are available for this feature:
BLAST of EY720102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PUPB_PSEPU3.596e-1345.36Ferric-pseudobactin BN7/BN8 receptor OS=Pseudomona... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-002-A09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720102 ID=EY720102; Name=EY720102; organism=Citrus sinensis; type=EST; length=902bp
TCCGCGCTGGCGGCACGGCATCGGCCGGACACGCCCGCCACCCGCTGCGC
CCGCCGCCGATCGTCTCGCCGCTCGAAGAACCTTTGGAAAGACCGATTGA
TGCACCGTTCCGCCTTCCCCCGCATTCCGCCCCAACCCATGCCCCCGCGA
ACGCCGCGCCCCCACTGCCCACCTCACGCGCTGCGCTCAGTGGCGCTGGC
GCTGAACCTGGCCGTCGCGGGCATGACGCTCGCCACGGCAAGCTGGACGC
CGACCGCGCAGGCGCAGCCGGCCACCGCCCCGGCGCGGCGCTACGACATT
CCCGCCGGACCGCTCAACACCGCCTTGACCCATTTCGCGCAAGAGGCCGG
CGTGCTGCTCTCGGCGCCAGGGGCATTGACACAGCACAAGCGTGCCGCGG
GCCTGTCCGCGACCATGACGGTCGAACAGGGTTTCGCCGAACTGCTGCGG
GGACAAGGGCTGGCCGCCGTGCGGCAGGCGGATGGCAGTTATGCGCTACG
CCAGGCGCTGACTGCGGACGACGCGGGCATCTGAACGCTGGCCGCGGTGC
GCGTGACGGGCGCCCATGAATTCCCGGGGTCGTGCGCTGCTCGGCCCTTA
TGCCGGAAGACTGAGTGGCCCGTGGAGGGCCGCGTCGGACTGCTGCGCGA
GAGGGAACGTTAGTGGAACGTCCGGTCACCCGACCAGGCTATCATTCGCG
CTTGTTCGAGGGAATGGCCAAGCCGGATCGTGGGGGAAGTGCTGTGGTAG
GAATTCATTAGGTAGGGGAAAGGTTAACCGCAAAACGGGTCCGGAATGGT
TGTTTCCTGGTGGTGGGGGTTTATATGACACAGACTGGAATTTCATTAGA
GTTGGGTATTTTGGTCTAATTCAGGGTTGATTTAGGCATTGCAGTGCTGT
GG
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