EY720063

Overview
NameEY720063
Unique NameEY720063
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720063 vs. ExPASy Swiss-Prot
Match: CBBR_XANFL (HTH-type transcriptional regulator cbbR OS=Xanthobacter flavus GN=cbbR PE=4 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.648e-13
Identity = 68/227 (29.96%), Postives = 106/227 (46.70%), Query Frame = -1
Query:  176 AGAELLTHIRAIDTALAQXEQAMTAHAAQVTGRVRLGTGATACTYXXXXXXXXXXXXXXXLDVVASTGNTADMLRGLENNTLDIGLVTLPAPGRMFEVTPVLEDEFVAIFPARGPI-AMPDAVTPQALAALPLVLFEPGARTRRLVDDWFEEAGMAPKP--VMELGSTEAMKEIVAAGLACAVLPRLAVSGA---GHRDSLAVRSLAPRLARTLAIVVRRDKPLSRG 838
            AG ELL+    I  AL++ E+A+ A  +   G V +G  +TA  Y               +++    GN  D++RG+ +   D+ ++  P P    E   + +   + + P   P+      +TP  L    L++ EPG+ TR L++  FEEAG AP P   ME+GS E +K+ V AGL  A +    V+     G    L V  L P + + LA+  R  + L  G
Sbjct:   64 AGQELLSAQERIARALSEAERAIAALKSPERGSVVVGVVSTA-KYFAPMALAAFRRRRPEIELRLIIGNREDIIRGIVSLDFDVAIMGRPPPALEAETRLIGDHPHIVVAPVDHPLFKRRKRITPADLTRESLLVREPGSGTRILMERVFEEAG-APNPPIAMEIGSNETIKQSVMAGLGLAFISAHTVAAEVADGRLRVLEVEGL-PVVRQWLAVRARDKRLLPAG 287          
BLAST of EY720063 vs. ExPASy Swiss-Prot
Match: YEIE_ECOLI (Uncharacterized HTH-type transcriptional regulator yeiE OS=Escherichia coli (strain K12) GN=yeiE PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13
Identity = 68/214 (31.78%), Postives = 95/214 (44.39%), Query Frame = -1
Query:  170 ALAQXEQAMTAHAA--QVTGRVRLGTGATACTYXXXXXXXXXXXXXXXLDVVASTGNTADMLRGLENNTLDIGLVTLPAPGRMFEVTPVLEDEFVAIFPARGPIAMPDAVTPQALAALPLVLFEPGARTRRLVDDWFEEAGMAPKPVMELGSTEAMKEIVAAGLACAVLPRLAVSG---AGHRDSLAVRSLAPRLARTLAIVVRRDKPLSRGLR 796
            ALA  EQA+       +  G +R+   +T   Y               L +  S GN+ D+++ + +  +DIG +  P         P LEDE V       P+A    VT + LAA P +L E G+ TR +VD          +  MELG++EA+K  V  GL  + L R  +     AG    +AV    PRL RTL  +  R K LS  LR
Sbjct:   70 ALALLEQAVEIEQLFREDNGAIRIYASSTIGNYILPAVIARYRHDYPQLPIELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLEDELVVFAAPTSPLAR-GPVTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMELGNSEAIKHAVRHGLGISCLSRRVIEDQLQAGTLSEVAVP--LPRLMRTLWRIHHRQKHLSNALR 280          
BLAST of EY720063 vs. ExPASy Swiss-Prot
Match: YEIE_ECOL6 (Uncharacterized HTH-type transcriptional regulator yeiE OS=Escherichia coli O6 GN=yeiE PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13
Identity = 68/214 (31.78%), Postives = 95/214 (44.39%), Query Frame = -1
Query:  170 ALAQXEQAMTAHAA--QVTGRVRLGTGATACTYXXXXXXXXXXXXXXXLDVVASTGNTADMLRGLENNTLDIGLVTLPAPGRMFEVTPVLEDEFVAIFPARGPIAMPDAVTPQALAALPLVLFEPGARTRRLVDDWFEEAGMAPKPVMELGSTEAMKEIVAAGLACAVLPRLAVSG---AGHRDSLAVRSLAPRLARTLAIVVRRDKPLSRGLR 796
            ALA  EQA+       +  G +R+   +T   Y               L +  S GN+ D+++ + +  +DIG +  P         P LEDE V       P+A    VT + LAA P +L E G+ TR +VD          +  MELG++EA+K  V  GL  + L R  +     AG    +AV    PRL RTL  +  R K LS  LR
Sbjct:   70 ALALLEQAVEIEQLFREDNGAIRIYASSTIGNYILPAVIARYRHDYPQLPIELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLEDELVVFAAPTSPLAR-GPVTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMELGNSEAIKHAVRHGLGISCLSRRVIEDQLQAGTLSEVAVP--LPRLMRTLWRIHHRQKHLSNALR 280          
BLAST of EY720063 vs. ExPASy Swiss-Prot
Match: YEIE_ECO57 (Uncharacterized HTH-type transcriptional regulator yeiE OS=Escherichia coli O157:H7 GN=yeiE PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13
Identity = 68/214 (31.78%), Postives = 95/214 (44.39%), Query Frame = -1
Query:  170 ALAQXEQAMTAHAA--QVTGRVRLGTGATACTYXXXXXXXXXXXXXXXLDVVASTGNTADMLRGLENNTLDIGLVTLPAPGRMFEVTPVLEDEFVAIFPARGPIAMPDAVTPQALAALPLVLFEPGARTRRLVDDWFEEAGMAPKPVMELGSTEAMKEIVAAGLACAVLPRLAVSG---AGHRDSLAVRSLAPRLARTLAIVVRRDKPLSRGLR 796
            ALA  EQA+       +  G +R+   +T   Y               L +  S GN+ D+++ + +  +DIG +  P         P LEDE V       P+A    VT + LAA P +L E G+ TR +VD          +  MELG++EA+K  V  GL  + L R  +     AG    +AV    PRL RTL  +  R K LS  LR
Sbjct:   70 ALALLEQAVEIEQLFREDNGAIRIYASSTIGNYILPAVIARYRHDYPQLPIELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLEDELVVFAAPTSPLAR-GPVTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMELGNSEAIKHAVRHGLGISCLSRRVIEDQLQAGTLSEVAVP--LPRLMRTLWRIHHRQKHLSNALR 280          
BLAST of EY720063 vs. ExPASy Swiss-Prot
Match: OXYR_MYCAV (Probable hydrogen peroxide-inducible genes activator OS=Mycobacterium avium GN=oxyR PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.453e-11
Identity = 64/232 (27.59%), Postives = 89/232 (38.36%), Query Frame = -1
Query:  164 PAGAELLTHIRAIDTALAQXEQAMTAHAAQVTGRVRLGTGATACTYXXXXXXXXXXXXXXXLDVVASTGNTADMLRGLENNTLDIGLVTLPAPGRMFEVTPVLEDEFVAIFPARGPIAMPDAVTPQALAALPLVLFEPGARTRRLVDDWFEEAGMAPKPVMELGSTEAMK-----EIVAAGLACAVLPRLAVSGAGHRDSLAVRSL-APRLARTLAIVVRRDKPLSRGLRHL 841
            P GAELL H +A+  A      A       +   +RLG   T   Y               L +  +   T  +L  L    LD  L+ LPA        P+ +++FV   P   P+A    V   ALA LPL+L + G   R    D   +AG+      EL +T A       + V  GL   ++P+ AV     R  L +    APR  R + +V R         R L
Sbjct:   66 PQGAELLPHAQAVVEAADAFTAAAAGSTDPLRAGMRLGLIPTVVPYVLPTVLAGIAERRPGLTLRVTEDQTERLLAVLREGALDAALIALPAETAGVTAIPIYDEDFVLALPPGHPLAGKRRVPATALADLPLLLLDEGHCLRDQALDVCHKAGVR----AELANTRAASLATAVQCVTGGLGVTLIPQSAVPVEASRSRLGLAQFAAPRPGRRIGLVFRSSSGRDDSYREL 293          
BLAST of EY720063 vs. ExPASy Swiss-Prot
Match: OXYR_MYCMR (Probable hydrogen peroxide-inducible genes activator OS=Mycobacterium marinum GN=oxyR PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.237e-11
Identity = 63/230 (27.39%), Postives = 87/230 (37.83%), Query Frame = -1
Query:  164 GAELLTHIRAIDTALAQXEQAMTAHAAQVTGRVRLGTGATACTYXXXXXXXXXXXXXXXLDVVASTGNTADMLRGLENNTLDIGLVTLPAPGRMFEVTPVLEDEFVAIFPARGPIAMPDAVTPQALAALPLVLFEPGARTRRLVDDWFEEAGMAPKPVMELGSTEAMK-----EIVAAGLACAVLPRLAVSGAGHRDSLAVRSL-APRLARTLAIVVRRDKPLSRGLRHL 835
            G  LL H +A   A+     A    A  + G +R G   T   Y               L V      T  +L  L   +LD  L+ LPA  R     P+ E++FV   P   P+A    V   AL+ LPL+L + G   R    D  + AG+      EL  T A       + V  GL   ++P+ AVS    R  + +    AP   R + +V R         R L
Sbjct:   68 GRSLLPHAQAAVEAVEAFTTAAAGEADPLNGSIRFGIIPTVAPYVLPTVLAGLTRRLPTLTVRVIEDQTERLLTALREGSLDTALIALPADYRGLTEMPIYEEDFVLALPPGHPMADRHGVPVAALSELPLLLLDEGHCLRDQALDVCQNAGVR----AELADTRAASLATAVQCVNGGLGVTLIPQSAVSVEAARSRVGLAHFAAPTPGRRIGLVYRASSGRDEAYRQL 293          
The following BLAST results are available for this feature:
BLAST of EY720063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
CBBR_XANFL2.648e-1329.96HTH-type transcriptional regulator cbbR OS=Xanthob... [more]
YEIE_ECOLI3.459e-1331.78Uncharacterized HTH-type transcriptional regulator... [more]
YEIE_ECOL63.459e-1331.78Uncharacterized HTH-type transcriptional regulator... [more]
YEIE_ECO573.459e-1331.78Uncharacterized HTH-type transcriptional regulator... [more]
OXYR_MYCAV1.453e-1127.59Probable hydrogen peroxide-inducible genes activat... [more]
OXYR_MYCMR3.237e-1127.39Probable hydrogen peroxide-inducible genes activat... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-001-E10-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720063 ID=EY720063; Name=EY720063; organism=Citrus sinensis; type=EST; length=880bp
CTGGTGACGCTGGCGCTGAACCTGGATCGCCAGGGCATCGCCAGCGGCCT
GGACTTCACCGGCATGGCCGCCGTGCGCGACTGCGTCGAGGCGTGCAACC
AGCTGCCGGTGGACGTGTTCCACCCCTATGCGTTCATGCCCGCAGCGCCA
GCAACGCTTCCTGCAGGTGCCGCAGTCCACGGCTGAGCGGCTTGTCCCGG
CGCACCACGATGGCCAGGGTGCGCGCCAGGCGCGGCGCCAGCGAGCGCAC
GGCCAGGCTGTCGCGGTGGCCGGCGCCGCTCACCGCCAGCCTGGGCAGCA
CGGCGCAGGCCAGGCCGGCGGCCACGATTTCCTTCATGGCCTCGGTGCTG
CCCAGTTCCATGACCGGCTTGGGCGCCATCCCGGCTTCCTCGAACCAGTC
ATCCACCAGCCGCCGGGTGCGCGCGCCCGGCTCGAACAGCACCAGCGGCA
ACGCCGCCAACGCCTGCGGCGTGACGGCATCCGGCATGGCGATGGGGCCG
CGCGCCGGAAAGATGGCCACGAACTCGTCTTCCAGCACCGGGGTGACCTC
GAACATGCGGCCCGGCGCCGGCAGCGTCACCAGGCCGATGTCCAGCGTGT
TGTTCTCCAGCCCGCGCAGCATGTCGGCGGTATTGCCGGTGCTGGCCACC
ACGTCCAGCGCCGGAAAGCGCCGCCGCAGGCTCGCCAGCAGTGGCGGCAG
CAGATAGGTGCAGGCGGTGGCGCCGGTGCCCAGCCGCACCCGCCCCGTCA
CCTGCGCGGCGTGCGCCGTCATGGCCTGCTCGGNCTGCGCCAGCGCCGTG
TCGATCGCGCGGATGTGGGTCAGCAGTTCAGCCCCGGCGGGGTCGGNCCC
GCTCNGCGGCCACCCGCTCGACAGCTTCGG
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