EY720063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720063 vs. ExPASy Swiss-Prot
Match: CBBR_XANFL (HTH-type transcriptional regulator cbbR OS=Xanthobacter flavus GN=cbbR PE=4 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.648e-13 Identity = 68/227 (29.96%), Postives = 106/227 (46.70%), Query Frame = -1 Query: 176 AGAELLTHIRAIDTALAQXEQAMTAHAAQVTGRVRLGTGATACTYXXXXXXXXXXXXXXXLDVVASTGNTADMLRGLENNTLDIGLVTLPAPGRMFEVTPVLEDEFVAIFPARGPI-AMPDAVTPQALAALPLVLFEPGARTRRLVDDWFEEAGMAPKP--VMELGSTEAMKEIVAAGLACAVLPRLAVSGA---GHRDSLAVRSLAPRLARTLAIVVRRDKPLSRG 838 AG ELL+ I AL++ E+A+ A + G V +G +TA Y +++ GN D++RG+ + D+ ++ P P E + + + + P P+ +TP L L++ EPG+ TR L++ FEEAG AP P ME+GS E +K+ V AGL A + V+ G L V L P + + LA+ R + L G Sbjct: 64 AGQELLSAQERIARALSEAERAIAALKSPERGSVVVGVVSTA-KYFAPMALAAFRRRRPEIELRLIIGNREDIIRGIVSLDFDVAIMGRPPPALEAETRLIGDHPHIVVAPVDHPLFKRRKRITPADLTRESLLVREPGSGTRILMERVFEEAG-APNPPIAMEIGSNETIKQSVMAGLGLAFISAHTVAAEVADGRLRVLEVEGL-PVVRQWLAVRARDKRLLPAG 287
BLAST of EY720063 vs. ExPASy Swiss-Prot
Match: YEIE_ECOLI (Uncharacterized HTH-type transcriptional regulator yeiE OS=Escherichia coli (strain K12) GN=yeiE PE=4 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 68/214 (31.78%), Postives = 95/214 (44.39%), Query Frame = -1 Query: 170 ALAQXEQAMTAHAA--QVTGRVRLGTGATACTYXXXXXXXXXXXXXXXLDVVASTGNTADMLRGLENNTLDIGLVTLPAPGRMFEVTPVLEDEFVAIFPARGPIAMPDAVTPQALAALPLVLFEPGARTRRLVDDWFEEAGMAPKPVMELGSTEAMKEIVAAGLACAVLPRLAVSG---AGHRDSLAVRSLAPRLARTLAIVVRRDKPLSRGLR 796 ALA EQA+ + G +R+ +T Y L + S GN+ D+++ + + +DIG + P P LEDE V P+A VT + LAA P +L E G+ TR +VD + MELG++EA+K V GL + L R + AG +AV PRL RTL + R K LS LR Sbjct: 70 ALALLEQAVEIEQLFREDNGAIRIYASSTIGNYILPAVIARYRHDYPQLPIELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLEDELVVFAAPTSPLAR-GPVTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMELGNSEAIKHAVRHGLGISCLSRRVIEDQLQAGTLSEVAVP--LPRLMRTLWRIHHRQKHLSNALR 280
BLAST of EY720063 vs. ExPASy Swiss-Prot
Match: YEIE_ECOL6 (Uncharacterized HTH-type transcriptional regulator yeiE OS=Escherichia coli O6 GN=yeiE PE=4 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 68/214 (31.78%), Postives = 95/214 (44.39%), Query Frame = -1 Query: 170 ALAQXEQAMTAHAA--QVTGRVRLGTGATACTYXXXXXXXXXXXXXXXLDVVASTGNTADMLRGLENNTLDIGLVTLPAPGRMFEVTPVLEDEFVAIFPARGPIAMPDAVTPQALAALPLVLFEPGARTRRLVDDWFEEAGMAPKPVMELGSTEAMKEIVAAGLACAVLPRLAVSG---AGHRDSLAVRSLAPRLARTLAIVVRRDKPLSRGLR 796 ALA EQA+ + G +R+ +T Y L + S GN+ D+++ + + +DIG + P P LEDE V P+A VT + LAA P +L E G+ TR +VD + MELG++EA+K V GL + L R + AG +AV PRL RTL + R K LS LR Sbjct: 70 ALALLEQAVEIEQLFREDNGAIRIYASSTIGNYILPAVIARYRHDYPQLPIELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLEDELVVFAAPTSPLAR-GPVTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMELGNSEAIKHAVRHGLGISCLSRRVIEDQLQAGTLSEVAVP--LPRLMRTLWRIHHRQKHLSNALR 280
BLAST of EY720063 vs. ExPASy Swiss-Prot
Match: YEIE_ECO57 (Uncharacterized HTH-type transcriptional regulator yeiE OS=Escherichia coli O157:H7 GN=yeiE PE=4 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 68/214 (31.78%), Postives = 95/214 (44.39%), Query Frame = -1 Query: 170 ALAQXEQAMTAHAA--QVTGRVRLGTGATACTYXXXXXXXXXXXXXXXLDVVASTGNTADMLRGLENNTLDIGLVTLPAPGRMFEVTPVLEDEFVAIFPARGPIAMPDAVTPQALAALPLVLFEPGARTRRLVDDWFEEAGMAPKPVMELGSTEAMKEIVAAGLACAVLPRLAVSG---AGHRDSLAVRSLAPRLARTLAIVVRRDKPLSRGLR 796 ALA EQA+ + G +R+ +T Y L + S GN+ D+++ + + +DIG + P P LEDE V P+A VT + LAA P +L E G+ TR +VD + MELG++EA+K V GL + L R + AG +AV PRL RTL + R K LS LR Sbjct: 70 ALALLEQAVEIEQLFREDNGAIRIYASSTIGNYILPAVIARYRHDYPQLPIELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLEDELVVFAAPTSPLAR-GPVTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMELGNSEAIKHAVRHGLGISCLSRRVIEDQLQAGTLSEVAVP--LPRLMRTLWRIHHRQKHLSNALR 280
BLAST of EY720063 vs. ExPASy Swiss-Prot
Match: OXYR_MYCAV (Probable hydrogen peroxide-inducible genes activator OS=Mycobacterium avium GN=oxyR PE=4 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.453e-11 Identity = 64/232 (27.59%), Postives = 89/232 (38.36%), Query Frame = -1 Query: 164 PAGAELLTHIRAIDTALAQXEQAMTAHAAQVTGRVRLGTGATACTYXXXXXXXXXXXXXXXLDVVASTGNTADMLRGLENNTLDIGLVTLPAPGRMFEVTPVLEDEFVAIFPARGPIAMPDAVTPQALAALPLVLFEPGARTRRLVDDWFEEAGMAPKPVMELGSTEAMK-----EIVAAGLACAVLPRLAVSGAGHRDSLAVRSL-APRLARTLAIVVRRDKPLSRGLRHL 841 P GAELL H +A+ A A + +RLG T Y L + + T +L L LD L+ LPA P+ +++FV P P+A V ALA LPL+L + G R D +AG+ EL +T A + V GL ++P+ AV R L + APR R + +V R R L Sbjct: 66 PQGAELLPHAQAVVEAADAFTAAAAGSTDPLRAGMRLGLIPTVVPYVLPTVLAGIAERRPGLTLRVTEDQTERLLAVLREGALDAALIALPAETAGVTAIPIYDEDFVLALPPGHPLAGKRRVPATALADLPLLLLDEGHCLRDQALDVCHKAGVR----AELANTRAASLATAVQCVTGGLGVTLIPQSAVPVEASRSRLGLAQFAAPRPGRRIGLVFRSSSGRDDSYREL 293
BLAST of EY720063 vs. ExPASy Swiss-Prot
Match: OXYR_MYCMR (Probable hydrogen peroxide-inducible genes activator OS=Mycobacterium marinum GN=oxyR PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.237e-11 Identity = 63/230 (27.39%), Postives = 87/230 (37.83%), Query Frame = -1 Query: 164 GAELLTHIRAIDTALAQXEQAMTAHAAQVTGRVRLGTGATACTYXXXXXXXXXXXXXXXLDVVASTGNTADMLRGLENNTLDIGLVTLPAPGRMFEVTPVLEDEFVAIFPARGPIAMPDAVTPQALAALPLVLFEPGARTRRLVDDWFEEAGMAPKPVMELGSTEAMK-----EIVAAGLACAVLPRLAVSGAGHRDSLAVRSL-APRLARTLAIVVRRDKPLSRGLRHL 835 G LL H +A A+ A A + G +R G T Y L V T +L L +LD L+ LPA R P+ E++FV P P+A V AL+ LPL+L + G R D + AG+ EL T A + V GL ++P+ AVS R + + AP R + +V R R L Sbjct: 68 GRSLLPHAQAAVEAVEAFTTAAAGEADPLNGSIRFGIIPTVAPYVLPTVLAGLTRRLPTLTVRVIEDQTERLLTALREGSLDTALIALPADYRGLTEMPIYEEDFVLALPPGHPMADRHGVPVAALSELPLLLLDEGHCLRDQALDVCQNAGVR----AELADTRAASLATAVQCVNGGLGVTLIPQSAVSVEAARSRVGLAHFAAPTPGRRIGLVYRASSGRDEAYRQL 293 The following BLAST results are available for this feature:
BLAST of EY720063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY720063 ID=EY720063; Name=EY720063; organism=Citrus sinensis; type=EST; length=880bpback to top |