EY719776

Overview
NameEY719776
Unique NameEY719776
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length337
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY719776 vs. ExPASy Swiss-Prot
Match: Y4TR_RHISN (Probable peptide ABC transporter ATP-binding protein y4tR OS=Rhizobium sp. (strain NGR234) GN=NGR_a01410 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.353e-19
Identity = 47/103 (45.63%), Postives = 69/103 (66.99%), Query Frame = -3
Query:   27 VGGVSFEVAPGEMVGIVGESGSGKTQAARAIMGLTPPPLV-VAGGSIRFEGVEVTQASPAALRKLRGARIGMVFQEPMTSLNPSMSIGRQLDEGLKLHRRDRR 332
            +GGV+F V  GEM+GIVGESG GK+  A +I+ L P       GG + F+G  + + S   +R++RG RI M+FQ+PMTSL+P  ++GRQ+ E +++H R  R
Sbjct:   32 LGGVNFHVKSGEMLGIVGESGCGKSVTALSILRLLPKQTAKTVGGEVIFKGRNLLELSERQMREVRGNRIAMIFQDPMTSLSPVHTVGRQIAEAVQIHGRVSR 134          
BLAST of EY719776 vs. ExPASy Swiss-Prot
Match: DPPD_HAEIN (Dipeptide transport ATP-binding protein dppD OS=Haemophilus influenzae GN=dppD PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.353e-19
Identity = 47/97 (48.45%), Postives = 68/97 (70.10%), Query Frame = -3
Query:   42 VGGVSFEVAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVVAGGSIRFEGVEVTQASPAALRKLRGARIGMVFQEPMTSLNPSMSIGRQLDEGLKLH 332
            V  +S++VA GE++GIVGESGSGK+ ++ AIMGL   P  V+  S++FE  ++      A R+L GA + M+FQ+PMTSLNP+ ++G Q+ E LK H
Sbjct:   23 VDRISYQVAQGEVLGIVGESGSGKSVSSLAIMGLIDHPGRVSAESLQFENTDLLTLESKAKRQLIGADVAMIFQDPMTSLNPAYTVGFQIMEALKTH 119          
BLAST of EY719776 vs. ExPASy Swiss-Prot
Match: YEJF_ECOLI (Uncharacterized ABC transporter ATP-binding protein yejF OS=Escherichia coli (strain K12) GN=yejF PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.719e-19
Identity = 50/104 (48.08%), Postives = 66/104 (63.46%), Query Frame = -3
Query:   27 IVGGVSFEVAPGEMVGIVGESGSGKTQAARAIMGLTP-PPLVVAGGSIRFEGVEVTQASPAALRKLRGARIGMVFQEPMTSLNPSMSIGRQLDEGLKLHRRDRR 335
            +V  VS ++  GE + +VGESGSGK+  A +I+ L P PP+    G IRF G  +  AS   LR +RG +I M+FQEPM SLNP  ++ +QL E L LHR  RR
Sbjct:   24 VVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVEYLSGDIRFHGESLLHASDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRR 127          

HSP 2 Score: 66.2402 bits (160), Expect = 5.732e-11
Identity = 37/99 (37.37%), Postives = 63/99 (63.64%), Query Frame = -3
Query:   39 IVGGVSFEVAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVVAGGSIRFEGVEVTQASPAALRKLRGARIGMVFQEPMTSLNPSMSIGRQLDEGLKLHR 335
            +V  +SF +  GE +G+VGESGSGK+    A++      L+ + GSI F+G  +   +   L  +R  RI +VFQ+P +SLNP +++ + ++EGL++H+
Sbjct:  301 VVKNISFTLRAGETLGLVGESGSGKSTTGLALL-----RLINSQGSIIFDGQPLQNLNRRQLLPIR-HRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQ 393          
BLAST of EY719776 vs. ExPASy Swiss-Prot
Match: OPPD_BACSU (Oligopeptide transport ATP-binding protein oppD OS=Bacillus subtilis GN=oppD PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 7.469e-19
Identity = 47/100 (47.00%), Postives = 66/100 (66.00%), Query Frame = -3
Query:   36 VGGVSFEVAPGEMVGIVGESGSGKTQAARAIMGLTP-PPLVVAGGSIRFEGVEVTQASPAALRKLRGARIGMVFQEPMTSLNPSMSIGRQLDEGLKLHRR 332
            + GV+F +  GE + IVGESGSGK+  ++AIM L P PP     G I FEG ++   S   ++ +RG  IGM+FQ+PMTSLNP+M +G+Q+ E L  H +
Sbjct:   27 IRGVNFHLDKGETLAIVGESGSGKSVTSQAIMKLIPMPPGYFKRGEILFEGKDLVPLSEKEMQNVRGKEIGMIFQDPMTSLNPTMKVGKQITEVLFKHEK 126          
BLAST of EY719776 vs. ExPASy Swiss-Prot
Match: Y1094_BRUSU (Putative peptide import ATP-binding protein BRA1094 OS=Brucella suis GN=BRA1094 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.173e-18
Identity = 44/97 (45.36%), Postives = 69/97 (71.13%), Query Frame = -3
Query:   42 VGGVSFEVAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVVAGGSIRFEGVEVTQASPAALRKLRGARIGMVFQEPMTSLNPSMSIGRQLDEGLKLH 332
            V  V+F +AP E +G+VGESGSGK+  A +++ L        GGS+R++G ++   + + LR++RG  I MVFQ+P+ +LNP ++IGRQ++EGL+LH
Sbjct:   30 VDDVNFTLAPRETLGLVGESGSGKSVTALSLLRLHDQRNSRLGGSVRYKGEDLFTLATSRLRQIRGHEIAMVFQDPIHTLNPVLTIGRQIEEGLRLH 126          
BLAST of EY719776 vs. ExPASy Swiss-Prot
Match: Y1052_BRUA2 (Putative peptide import ATP-binding protein BAB2_1052 OS=Brucella abortus (strain 2308) GN=BAB2_1052 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.173e-18
Identity = 44/97 (45.36%), Postives = 69/97 (71.13%), Query Frame = -3
Query:   42 VGGVSFEVAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVVAGGSIRFEGVEVTQASPAALRKLRGARIGMVFQEPMTSLNPSMSIGRQLDEGLKLH 332
            V  V+F +AP E +G+VGESGSGK+  A +++ L        GGS+R++G ++   + + LR++RG  I MVFQ+P+ +LNP ++IGRQ++EGL+LH
Sbjct:   30 VDDVNFTLAPRETLGLVGESGSGKSVTALSLLRLHDQRNSRLGGSVRYKGEDLFTLATSRLRQIRGHEIAMVFQDPIHTLNPVLTIGRQIEEGLRLH 126          
BLAST of EY719776 vs. ExPASy Swiss-Prot
Match: Y1033_BRUAB (Putative peptide import ATP-binding protein BruAb2_1033 OS=Brucella abortus GN=BruAb2_1033 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.173e-18
Identity = 44/97 (45.36%), Postives = 69/97 (71.13%), Query Frame = -3
Query:   42 VGGVSFEVAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVVAGGSIRFEGVEVTQASPAALRKLRGARIGMVFQEPMTSLNPSMSIGRQLDEGLKLH 332
            V  V+F +AP E +G+VGESGSGK+  A +++ L        GGS+R++G ++   + + LR++RG  I MVFQ+P+ +LNP ++IGRQ++EGL+LH
Sbjct:   30 VDDVNFTLAPRETLGLVGESGSGKSVTALSLLRLHDQRNSRLGGSVRYKGEDLFTLATSRLRQIRGHEIAMVFQDPIHTLNPVLTIGRQIEEGLRLH 126          
BLAST of EY719776 vs. ExPASy Swiss-Prot
Match: OPPD_HAEIN (Oligopeptide transport ATP-binding protein oppD OS=Haemophilus influenzae GN=oppD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.707e-18
Identity = 50/98 (51.02%), Postives = 64/98 (65.31%), Query Frame = -3
Query:   39 VGGVSFEVAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVVAGGSIRFEGVEVTQASPAALRKLRGARIGMVFQEPMTSLNPSMSIGRQLDEGLKLHR 332
            V  ++F +  G  +GIVGESGSGK+Q A A+MGL      V G +I FEG E+     A L K+R  +I M+FQ+PMTSLNP M IG QL E L+LH+
Sbjct:   24 VNDLNFTLNAGSTLGIVGESGSGKSQTAFALMGLLAANGEVEGSAI-FEGKELVNLPNAELNKIRAEQISMIFQDPMTSLNPYMKIGEQLMEVLQLHK 120          
BLAST of EY719776 vs. ExPASy Swiss-Prot
Match: DPPD_BACSU (Dipeptide transport ATP-binding protein dppD OS=Bacillus subtilis GN=dppD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.707e-18
Identity = 46/100 (46.00%), Postives = 67/100 (67.00%), Query Frame = -3
Query:   36 VGGVSFEVAPGEMVGIVGESGSGKTQAARAIMGLTPP-PLVVAGGSIRFEGVEVTQASPAALRKLRGARIGMVFQEPMTSLNPSMSIGRQLDEGLKLHRR 332
            V GVSF++  GE   IVGESG GK+  +++IMGL PP    V  G I F+  ++ + S   +R +RGA I M+FQ+PMT+LNP++++G QL E L  H++
Sbjct:   24 VRGVSFDLYKGETFAIVGESGCGKSVTSQSIMGLLPPYSAKVTDGRILFKNKDLCRLSDKEMRGIRGADISMIFQDPMTALNPTLTVGDQLGEALLRHKK 123          
BLAST of EY719776 vs. ExPASy Swiss-Prot
Match: Y1312_MYCBO (Uncharacterized ABC transporter ATP-binding protein Mb1312c OS=Mycobacterium bovis GN=Mb1312c PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.841e-18
Identity = 44/98 (44.90%), Postives = 67/98 (68.37%), Query Frame = -3
Query:   39 VGGVSFEVAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVVAGGSIRFEGVEVTQASPAALRKLRGARIGMVFQEPMTSLNPSMSIGRQLDEGLKLHR 332
            V G+S+ V PGE+V +VGESGSGK+ AA A++GL P    V G S+R +G E+   +  A+ + RG  IG VFQ+PM++L P  ++G Q+ E +++H+
Sbjct:   24 VRGISYRVEPGEVVAMVGESGSGKSAAAMAVVGLLPEYAQVRG-SVRLQGTELLGLADNAMSRFRGKAIGTVFQDPMSALTPVYTVGDQIAEAIEVHQ 120          
The following BLAST results are available for this feature:
BLAST of EY719776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
Y4TR_RHISN3.353e-1945.63Probable peptide ABC transporter ATP-binding prote... [more]
DPPD_HAEIN3.353e-1948.45Dipeptide transport ATP-binding protein dppD OS=Ha... [more]
YEJF_ECOLI5.719e-1948.08Uncharacterized ABC transporter ATP-binding protei... [more]
OPPD_BACSU7.469e-1947.00Oligopeptide transport ATP-binding protein oppD OS... [more]
Y1094_BRUSU2.173e-1845.36Putative peptide import ATP-binding protein BRA109... [more]
Y1052_BRUA22.173e-1845.36Putative peptide import ATP-binding protein BAB2_1... [more]
Y1033_BRUAB2.173e-1845.36Putative peptide import ATP-binding protein BruAb2... [more]
OPPD_HAEIN3.707e-1851.02Oligopeptide transport ATP-binding protein oppD OS... [more]
DPPD_BACSU3.707e-1846.00Dipeptide transport ATP-binding protein dppD OS=Ba... [more]
Y1312_MYCBO4.841e-1844.90Uncharacterized ABC transporter ATP-binding protei... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-106-F10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY719776 ID=EY719776; Name=EY719776; organism=Citrus sinensis; type=EST; length=337bp
GTCCCGGGGTTCGGGAATTCCCGGGGTCGACGGTCGCGGCGATGCAGCTT
GAGCCCTTCGTCCAGCTGGCGCCCGATGGACATGGACGGGTTGAGCGAGG
TCATGGGTTCCTGGAACACCATGCCGATGCGCGCGCCGCGCAGCTTGCGC
AGCGCGGCCGGGCTGGCCTGGGTGACTTCCACGCCCTCGAAGCGGATCGA
GCCGCCGGCCACCACCAGCGGCGGCGGCGTCAGGCCCATGATGGCGCGCG
CCGCCTGGGTCTTGCCGCTGCCGGACTCGCCGACGATGCCGACCATTTCG
CCCGGCGCCACCTCGAAGGACACGCCGCCGACGATTT
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