EY719767

Overview
NameEY719767
Unique NameEY719767
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY719767 vs. ExPASy Swiss-Prot
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.227e-28
Identity = 63/115 (54.78%), Postives = 84/115 (73.04%), Query Frame = 2
Query:  242 RDKIAAQFHQLTEQIEAALSDIPYDKLDLSEEVREQIELVHVQFRRAKGRPDSPDLQLDHDLAVAQKERDPDPAILGRLSEKLHLKTINDLKNESLAFHELVISSGEDPWELF*R 586
            RD +  +F  +T +IEAALS IPY+K+++SEEVREQ++L+H QF+RAK R +  DLQL HDLA+A+   DPDP IL RLS++L L TI++LK ES A HE  +S   DP + F R
Sbjct:   98 RDSLVEKFRDMTVEIEAALSQIPYEKIEVSEEVREQVQLLHFQFKRAKERWEESDLQLSHDLAMAENVMDPDPIILKRLSQELQLTTIDELKKESHAIHEYFLSYDGDPDDCFER 212          

HSP 2 Score: 21.557 bits (44), Expect = 1.227e-28
Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  567 PGNCFEEKSSLLR 605
            P +CFE  SSLL+
Sbjct:  206 PDDCFERMSSLLK 218          
BLAST of EY719767 vs. ExPASy Swiss-Prot
Match: SL11_ORYSJ (Protein spotted leaf 11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 1.108e-25
Identity = 66/117 (56.41%), Postives = 83/117 (70.94%), Query Frame = 2
Query:  236 LQRDKIAAQFHQLTEQIEAALSDIPYDKLDLSEEVREQIELVHVQFRRAKGRPDSPDLQLDHD-LAVAQKERDP--DPAILGRLSEKLHLKTINDLKNESLAFHELVIS-SGEDPWE 574
            L+RD +  +F  +  Q+E AL DIPY++LD+S+EVREQ+ELVH Q +RAK R D PD +  +D L+V  K  DP  + AILGRLSEKLHL TI DL  ESLA HE+V S  G+DP E
Sbjct:  114 LERDSVMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRAKERIDMPDDEFYNDLLSVYDKNYDPSAELAILGRLSEKLHLMTITDLTQESLALHEMVASGGGQDPGE 230          
BLAST of EY719767 vs. ExPASy Swiss-Prot
Match: SL11_ORYSI (Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 1.108e-25
Identity = 66/117 (56.41%), Postives = 83/117 (70.94%), Query Frame = 2
Query:  236 LQRDKIAAQFHQLTEQIEAALSDIPYDKLDLSEEVREQIELVHVQFRRAKGRPDSPDLQLDHD-LAVAQKERDP--DPAILGRLSEKLHLKTINDLKNESLAFHELVIS-SGEDPWE 574
            L+RD +  +F  +  Q+E AL DIPY++LD+S+EVREQ+ELVH Q +RAK R D PD +  +D L+V  K  DP  + AILGRLSEKLHL TI DL  ESLA HE+V S  G+DP E
Sbjct:  114 LERDSVMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRAKERIDMPDDEFYNDLLSVYDKNYDPSAELAILGRLSEKLHLMTITDLTQESLALHEMVASGGGQDPGE 230          
BLAST of EY719767 vs. ExPASy Swiss-Prot
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.689e-21
Identity = 59/152 (38.82%), Postives = 93/152 (61.18%), Query Frame = 2
Query:  128 TPLSFSEFLCASNSFILFAKHSISYRS*ALIPIL*CLQRDKIAAQFHQLTEQIEAALSDIPYDKLDLSEEVREQIELVHVQFRRAKGRPDSPDLQLDHDL-AVAQKERDPD--PAILGRLSEKLHLKTINDLKNESLAFHELVISSGEDPWE 574
            T ++  E +C++  ++ F              I   ++R+++ ++  +++ ++E +LS IPY++LD+S+EVREQ+ELV  QFRRAKGR D  D +L  DL ++  K  D D    +L R+++KLHL  I DL  ES+A HE+V SSG D  E
Sbjct:   64 TLMNLKEAMCSAKDYLKFCSQGSK--------IYLVMEREQVTSKLMEVSVKLEQSLSQIPYEELDISDEVREQVELVLSQFRRAKGRVDVSDDELYEDLQSLCNKSSDVDAYQPVLERVAKKLHLMEIPDLAQESVALHEMVASSGGDVGE 207          
BLAST of EY719767 vs. ExPASy Swiss-Prot
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.953e-16
Identity = 57/141 (40.43%), Postives = 87/141 (61.70%), Query Frame = 2
Query:  173 ILFAKHSISYRS*ALIPIL*CLQRDKIAAQFHQLTEQIEAALSDIPYDKLDLSEEVREQIELVHVQFRRAKGR--PDSPDLQLDHDLAVAQKERDP--DPAILGRLSEKLHLKTINDLKNESLAFHELVISS-GEDPWELF 580
            +L AK  +S+ S  +  I   L+RD++  +F ++T  +E ALS IPY+ L++S+E++EQ+ELV VQ RR+ G+   D  D +L  D+      R    +  ++ R++EKL L TI DL  ESLA  ++V SS G+DP E F
Sbjct:   72 LLHAKDLLSFVS-HVSKIYLVLERDQVMVKFQKVTSLLEQALSIIPYENLEISDELKEQVELVLVQLRRSLGKRGGDVYDDELYKDVLSLYSGRGSVMESDMVRRVAEKLQLMTITDLTQESLALLDMVSSSGGDDPGESF 211          

HSP 2 Score: 20.7866 bits (42), Expect = 9.953e-16
Identity = 8/16 (50.00%), Postives = 11/16 (68.75%), Query Frame = 3
Query:  567 PGNCFEEKSSLLRKAK 614
            PG  FE+ S +L+K K
Sbjct:  207 PGESFEKMSMVLKKIK 222          
BLAST of EY719767 vs. ExPASy Swiss-Prot
Match: PUB15_ARATH (U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.236e-13
Identity = 38/111 (34.23%), Postives = 68/111 (61.26%), Query Frame = 2
Query:  236 LQRDKIAAQFHQLTEQIEAALSDIPYDKLDLSEEVREQIELVHVQFRRAKGRPDSPDLQLDHDLAVAQKERDP---DPAILGRLSEKLHLKTINDLKNESLAFHELVISSG 559
            L  + +  +FH + E++   L   P+D+L +S + +++I+ +  Q ++AK R D+ D++L  D+ V   + DP   D AI+ RL++KL L+TI+DLK E++A   L+   G
Sbjct:  134 LDGETMMTRFHSIYEKLNRVLVKAPFDELMISGDAKDEIDSLCKQLKKAKRRTDTQDIELAVDMMVVFSKTDPRNADSAIIERLAKKLELQTIDDLKTETIAIQSLIQDKG 244          
The following BLAST results are available for this feature:
BLAST of EY719767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
PUB14_ARATH1.227e-2854.78U-box domain-containing protein 14 OS=Arabidopsis ... [more]
SL11_ORYSJ1.108e-2556.41Protein spotted leaf 11 OS=Oryza sativa subsp. jap... [more]
SL11_ORYSI1.108e-2556.41Protein spotted leaf 11 OS=Oryza sativa subsp. ind... [more]
PUB13_ARATH3.689e-2138.82U-box domain-containing protein 13 OS=Arabidopsis ... [more]
PUB12_ARATH9.953e-1640.43U-box domain-containing protein 12 OS=Arabidopsis ... [more]
PUB15_ARATH8.236e-1334.23U-box domain-containing protein 15 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-106-E08-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY719767 ID=EY719767; Name=EY719767; organism=Citrus sinensis; type=EST; length=922bp
CTTAAATATCATGTGAGAAAGTTATCATTGTTCTACTTGTTCATTTGTGT
AAATTTGTCCATGTTAACTTTCACTAGTACTCTTGTCATCAGAACTTCAA
AAACTTATATTTTTATCCCTTAAATGTACCCCACTTTCATTTTCTGAATT
CCTTTGTGCTTCAAATTCTTTCATTCTGTTCGCAAAGCACTCTATAAGTT
ACCGTAGCTGAGCGTTGATTCCAATTTTATAGTGTTTGCAAAGGGATAAG
ATTGCAGCACAGTTTCATCAACTGACAGAACAAATTGAAGCAGCACTGAG
TGACATTCCATATGATAAACTTGATTTGTCTGAGGAAGTTCGAGAACAGA
TTGAACTCGTGCATGTTCAATTCAGAAGAGCAAAAGGAAGACCAGACTCA
CCTGATTTGCAACTGGATCATGATTTAGCTGTAGCACAGAAAGAAAGAGA
CCCAGACCCTGCAATATTAGGAAGACTTTCAGAAAAACTGCATCTTAAAA
CCATCAACGATTTGAAAAATGAGTCCCTTGCTTTTCATGAATTGGTCATT
TCAAGTGGTGAAGATCCCTGGGAACTGTTTTGAAGAGAAATCATCCCTGC
TAAGGAAAGCTAAAAAACTTTGTGCTGAATTGAAAACCCCTGAAGTTGAA
ATCCCTGGAAGGGGGAAAAAGGGGCTTGAATAAAACACAAAATCCCTGGT
TATCCCCAAAGAATTTTCAAAGCCCCATTTTCACTAAAAATTTAAAAAAA
GATCCTGGAATTTGTCCCCCCCTGGAAAAAAAAATAAGAAAAATACCGGC
ACCCCAAAAAGGGGTTGGGGAGGCGGGGGAAAAAAAAACGTGCCAAAAAA
ACACCCCAAAAAACCGGGTGCACAAAACGGCCCCCAAACACCCAAAAAAA
ACTTTTTGAAAAAATCTCAGAA
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