EY719764

Overview
NameEY719764
Unique NameEY719764
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY719764 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 2.602e-91
Identity = 172/197 (87.31%), Postives = 180/197 (91.37%), Query Frame = 3
Query:   72 MAAMASTAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYNEQNSYVVIKHAALVTSTIRTKLPGPPQRQVLYAVGPKGI 662
            MAAMASTAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWL GQLFSAMVVRKPAHIFLDELGIDY+EQ++YVVIKHAAL TSTI +KL   P  ++  AV  + +
Sbjct:    1 MAAMASTAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDL 197          
BLAST of EY719764 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 5.655e-62
Identity = 118/175 (67.43%), Postives = 142/175 (81.14%), Query Frame = 3
Query:  138 SSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYNEQNSYVVIKHAALVTSTIRTKLPGPPQRQVLYAVGPKGI 662
            SSF+G P++PS +R+QP K+    ++S+S + SPPYDL  F FDPIKESIVSREMTRRYM DMITYADTD    GAGS+GL C YELSKNP++Q+AIIEQSVSPGGGAWL GQLFS MVVRKPAH+FLDELGI+Y+EQ++YVVIKHAAL TSTI +KL   P  ++  AV  + +
Sbjct:   20 SSFYGTPLAPSSIRVQPTKAGAKPSISMSGAPSPPYDLKAFTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQSVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDL 193          
BLAST of EY719764 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 1.066e-60
Identity = 124/198 (62.63%), Postives = 154/198 (77.78%), Query Frame = 3
Query:   72 MAAMASTAFAPSVSSTT-NKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYNEQNSYVVIKHAALVTSTIRTKLPGPPQRQVLYAVGPKGI 662
            MAA+AST    S+SST   +LFDSSFHG+ +S + + +      +P + S+ A+ +  YDLN F FDPIKESIVSREMTRRYMTDMITYA+TD    GAGSAGLS AYE+SKNPN+Q+AIIEQSVSPGGGAWL GQLFSAM+VRKPAH+FLDE+G+ Y+EQ++YVV+KHAAL TSTI +KL   P  ++  AV  + +
Sbjct:    1 MAAIASTL---SLSSTKPQRLFDSSFHGSAISAAPISI----GLKPRSFSVRATTAG-YDLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDL 190          
BLAST of EY719764 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.668e-54
Identity = 115/190 (60.53%), Postives = 136/190 (71.58%), Query Frame = 3
Query:  111 SSTTNKLFDSSFHGAPMSPSLLRLQPIK----------SSRPNNLSISASAS-PPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYNEQNSYVVIKHAALVTSTIRTKLPGPPQRQVLYAV 647
            ++  + L  SSF G+ + P+  R  P             + P   S+S S+S PPYDL +F+F PIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYELSK+P + IAI+EQSVSPGGGAWL GQLFSAMVVRKPAH+FLDELG+ Y+E   YVVIKHAAL TST+ + L   P  ++  AV
Sbjct:    3 TAAASSLLKSSFAGSRL-PAATRTTPASLVVATGPRGAGAGPICASMSMSSSNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLARPNVKLFNAV 191          
BLAST of EY719764 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 7.402e-54
Identity = 112/188 (59.57%), Postives = 135/188 (71.81%), Query Frame = 3
Query:  111 SSTTNKLFDSSFHGAPMSPSLLRLQ---------PIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYNEQNSYVVIKHAALVTSTIRTKLPGPPQRQVLYAV 647
            ++  + L  SSF G+ + PS  R           P     P   SIS S +PPYDL +F+F PIKESIVSREMTRRYMTDMIT+ADTD    GAGSAGLSCAYELSK+P + +AI+EQSVSPGGGAWL GQLFSAMVVR+PAH+FLDELG+ Y+E   YVV+KHAAL TST+ ++L   P  ++  AV
Sbjct:    3 TTAASSLLKSSFAGSRL-PSATRTTTPSSVAVATPRAGGGPIRASIS-SPNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQSVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLARPNVKLFNAV 188          
BLAST of EY719764 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 3.124e-36
Identity = 77/142 (54.23%), Postives = 104/142 (73.24%), Query Frame = 3
Query:  225 ASASPPYDLN-TFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-SKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYNEQNSYVVIKHAALVTSTIRTKLPGPPQRQVLYA 644
            + A P Y L+ +F F PI+ES VSR MTRRY +D+  YA++D    GAGSAGL+ AY + ++ P+++IAIIE SV+PGGGAWL GQLFSAMVVRKPA +FL+E+G+ Y ++  YVV+KHAAL TST+  +    P  ++  A
Sbjct:   37 SKAYPTYSLDESFSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIEASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTLALPNVKLFNA 178          
BLAST of EY719764 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 2.025e-35
Identity = 77/130 (59.23%), Postives = 96/130 (73.85%), Query Frame = 3
Query:  258 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYNEQNSYVVIKHAALVTSTIRTKLPGPPQRQVLYA 644
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L K  P+++IAIIE SVSPGGGAWL GQLFSAM++RKPA  FL E+G+ Y ++ +YVV+KHAAL TSTI +K+   P  ++  A
Sbjct:   44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQMPNIKLFNA 173          
BLAST of EY719764 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.005e-34
Identity = 75/119 (63.03%), Postives = 91/119 (76.47%), Query Frame = 3
Query:  258 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYNEQNSYVVIKHAALVTSTIRTKL 611
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS  Y L K  P+++IAIIE SVSPGGGAWL GQLFSAMV+RKPA  FL E+G+ Y ++ +YVV+KHAAL TSTI +K+
Sbjct:   48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKV 166          
BLAST of EY719764 vs. ExPASy Swiss-Prot
Match: THI4_ASPOR (Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.714e-34
Identity = 77/145 (53.10%), Postives = 103/145 (71.03%), Query Frame = 3
Query:  258 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSK-NPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYNE--QNSYVVIKHAALVTSTIRTKLPGPPQRQVLYAVGPKGIDSQKAAN 683
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L+K  P+++IAI+E SVSPGGGAWL GQLFSAMV+R+PA +FL+ELG+ Y E    +YVV+KHA+L TST+ +K+   P  ++  A   + + ++   N
Sbjct:   48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVEASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSKVLSFPNVKLFNATAVEDLITRPTEN 192          
BLAST of EY719764 vs. ExPASy Swiss-Prot
Match: THI4_YEAST (Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.988e-34
Identity = 71/123 (57.72%), Postives = 93/123 (75.61%), Query Frame = 3
Query:  246 DLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYNEQNSYVVIKHAALVTSTIRTKL 611
            D + FKF PI+ES VSR MT RY  D+  +A +D    GAGS+GLS AY ++KN P++++ IIE SV+PGGG+WL GQLFSAMV+RKPAH+FL EL I Y ++  YVV+KHAAL  ST+ +K+
Sbjct:   34 DWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKV 156          
The following BLAST results are available for this feature:
BLAST of EY719764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
THI4_CITSI2.602e-9187.31Thiazole biosynthetic enzyme, chloroplastic OS=Cit... [more]
THI4_ALNGL5.655e-6267.43Thiazole biosynthetic enzyme, chloroplastic OS=Aln... [more]
THI4_ARATH1.066e-6062.63Thiazole biosynthetic enzyme, chloroplastic OS=Ara... [more]
THI41_MAIZE5.668e-5460.53Thiazole biosynthetic enzyme 1-1, chloroplastic OS... [more]
THI42_MAIZE7.402e-5459.57Thiazole biosynthetic enzyme 1-2, chloroplastic OS... [more]
THI2_SCHPO3.124e-3654.23Thiazole biosynthetic enzyme, mitochondrial OS=Sch... [more]
THI4_FUSOX2.025e-3559.23Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_FUSSH1.005e-3463.03Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_ASPOR1.714e-3453.10Thiazole biosynthetic enzyme, mitochondrial OS=Asp... [more]
THI4_YEAST4.988e-3457.72Thiazole biosynthetic enzyme, mitochondrial OS=Sac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-106-E03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY719764 ID=EY719764; Name=EY719764; organism=Citrus sinensis; type=EST; length=927bp
GCTGCAATCAAATTACTTCTCATTATCAAACTTCTAAGCAGCAGGGGAAG
GAGGGGTAAAAAAAAAAAAACATGGCAGCCATGGCTTCTACAGCTTTCGC
TCCTTCAGTTTCGTCTACCACCAATAAGCTCTTTGACTCATCCTTTCATG
GGGCTCCCATGTCACCTTCTCTTCTACGTCTTCAACCCATCAAATCTTCT
CGTCCCAACAACTTGTCCATTTCTGCTTCTGCTTCTCCTCCTTATGACTT
GAACACTTTCAAGTTTGACCCCATCAAAGAATCCATTGTTTCTCGTGAAA
TGACGCGCAGGTACATGACGGACATGATCACTTATGCTGACACTGATGTG
GTAGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCTTATGAGCTCAG
CAAAAACCCCAACATTCAGATTGCTATTATCGAACAGTCTGTTAGCCCCG
GCGGTGGCGCGTGGCTCAGTGGACAGCTCTTCTCTGCCATGGTTGTGCGC
AAACCAGCCCACATCTTCCTTGACGAGCTTGGCATCGACTACAATGAGCA
AAACAGCTATGTTGTGATCAAGCATGCAGCGCTGGTCACCTCCACTATAA
GGACCAAGCTCCCTGGGCCGCCCCAACGTCAAGTTCTTTATGCAGTGGGA
CCCAAAGGAATTGATAGTCAAAAGGCGGCAAATTTGGGGGGGGGGGGGAA
CAAATGGGGCGTGGGGGTCAAGGAATTCAAAAAACACAATCCTTGAATGG
ATCCCCAAGGGAAAGGAAACCAAAAGGGGGTTTGGAAGGCTCTTGGGGGC
CCGGAAGGGGGCTTTTTGGGGGCGCCCTGGAAAAAAAAAAAGGTGAAAAA
AAATATCGAAAATGATTGGGAGGAAATGGGCGGGGAAAAAGAGAGGAAGG
GGAAAATGGAAATATCCTCCAAAAAAA
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