EY719727

Overview
NameEY719727
Unique NameEY719727
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY719727 vs. ExPASy Swiss-Prot
Match: GLTB2_ARATH (Ferredoxin-dependent glutamate synthase 2, chloroplastic OS=Arabidopsis thaliana GN=GLU2 PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 2.570e-83
Identity = 124/199 (62.31%), Postives = 140/199 (70.35%), Query Frame = 3
Query:  183 SGQSFACFLTPGMNIHLIGEANDYVGKGMAXXXXXXXXXXXXXFCPEEATIVGNTCLYGATGGQIFVRGKAGERFAVRNSLAQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYISRMRMILSSPRSIRK**KVPRVIAPCWAKCS*KALIKAHVEKTGRPQRLRLFLQEREN*TSRSFWDPGSPLNEKKP 779
            +GQSFACFLTPGMNI L+GEANDYVGKGMA             F PE+ATIVGNTCLYGATGG +FVRGKAGERFAVRNSLAQAVVEGTGDHCCEYMTGGCVV+LGKVGRNVAAGMTGGLAYI      L  P+  ++  K+ RV +P   +   K+LI+AHVEKTG  +     + E  +     FW    P  E  P
Sbjct: 1410 AGQSFACFLTPGMNIRLVGEANDYVGKGMAGGEVVILPVESTGFRPEDATIVGNTCLYGATGGLLFVRGKAGERFAVRNSLAQAVVEGTGDHCCEYMTGGCVVILGKVGRNVAAGMTGGLAYILDEDNTL-LPKMNKEIVKIQRVTSPV-GQTQLKSLIQAHVEKTGSSK--GAMIVEEWDKYLAMFWQLVPPSEEDTP 1604          

HSP 2 Score: 105.145 bits (261), Expect = 2.570e-83
Identity = 51/69 (73.91%), Postives = 54/69 (78.26%), Query Frame = 1
Query:    1 DEVLLADAEISDAIEYEKVVHKTCKIYNVDRAVCGRIAGVIAKKYGDTGFAGQLNITFIGSLGSHLRAF 207
            D+ LL D EI DAIE EK VHKT  IYNVDR+VCGRIAGVIAKKYGDTGFAGQLN+TF GS G     F
Sbjct: 1349 DDTLLQDPEIMDAIENEKTVHKTMSIYNVDRSVCGRIAGVIAKKYGDTGFAGQLNLTFTGSAGQSFACF 1417          
BLAST of EY719727 vs. ExPASy Swiss-Prot
Match: GLTB_MAIZE (Ferredoxin-dependent glutamate synthase, chloroplastic OS=Zea mays GN=GLSF PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.061e-81
Identity = 125/199 (62.81%), Postives = 140/199 (70.35%), Query Frame = 3
Query:  183 SGQSFACFLTPGMNIHLIGEANDYVGKGMAXXXXXXXXXXXXXFCPEEATIVGNTCLYGATGGQIFVRGKAGERFAVRNSLAQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYISRMRMILSSPRSIRK**KVPRVIAPCWAKCS*KALIKAHVEKTGRPQRLRLFLQEREN*TSRSFWDPGSPLNEKKP 779
            +GQSF CFLTPGMNI L+GEANDYVGKGMA             F PE+ATIVGNTCLYGATGGQ+FVRGKAGERFAVRNSL QAVVEGTGDHCCEYMTGGCVVVLGK GRNVAAGMTGGLAYI      L  P+  ++  K+ RV AP   +   K LI+A+VEKTG  + + + L+E E      FW    P  E  P
Sbjct: 1401 AGQSFGCFLTPGMNIRLVGEANDYVGKGMAGGELVVVPVDKTGFVPEDATIVGNTCLYGATGGQVFVRGKAGERFAVRNSLCQAVVEGTGDHCCEYMTGGCVVVLGKAGRNVAAGMTGGLAYILDEDDTL-VPKVNKEIVKMQRVNAPA-GQMQLKGLIEAYVEKTGSEKGIAI-LREWEA-YLPLFWQLVPPSEEDSP 1595          

HSP 2 Score: 102.449 bits (254), Expect = 1.061e-81
Identity = 51/69 (73.91%), Postives = 55/69 (79.71%), Query Frame = 1
Query:    1 DEVLLADAEISDAIEYEKVVHKTCKIYNVDRAVCGRIAGVIAKKYGDTGFAGQLNITFIGSLGSHLRAF 207
            DE +LAD EI+DAIE EK V K  +IYNVDRAVCGR+AGVIAKKYGDTGFAGQLNITF GS G     F
Sbjct: 1340 DETILADPEIADAIENEKEVSKAFQIYNVDRAVCGRVAGVIAKKYGDTGFAGQLNITFNGSAGQSFGCF 1408          
BLAST of EY719727 vs. ExPASy Swiss-Prot
Match: GLTB1_ARATH (Ferredoxin-dependent glutamate synthase 1, chloroplastic OS=Arabidopsis thaliana GN=GLU1 PE=1 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 6.812e-81
Identity = 129/208 (62.02%), Postives = 145/208 (69.71%), Query Frame = 3
Query:  183 SGQSFACFLTPGMNIHLIGEANDYVGKGMAXXXXXXXXXXXXXFCPEEATIVGNTCLYGATGGQIFVRGKAGERFAVRNSLAQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYISRMRMILSSPRSIRK**KVPRVIAPCWAKCS*KALIKAHVEKTGRPQRLRLFLQEREN*TSRSFWDPGSPLNEKKPPQRVGAKIR 806
            +GQSF CFL PGMNI LIGE+NDYVGKGMA             F PEEATIVGNTCLYGATGGQIF RGKAGERFAVRNSLA+AVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAY+      L  P+  R+  K+ RV AP   +   K+LI+AHVEKTG  +   + L E E      FW    P +E+  P+   A +R
Sbjct: 1435 AGQSFGCFLIPGMNIRLIGESNDYVGKGMAGGEIVVTPVEKIGFVPEEATIVGNTCLYGATGGQIFARGKAGERFAVRNSLAEAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYLLDEDDTL-LPKINREIVKIQRVTAPA-GELQLKSLIEAHVEKTGSSKGATI-LNEWEK-YLPLFWQLVPP-SEEDTPEASAAYVR 1637          

HSP 2 Score: 97.0561 bits (240), Expect = 6.812e-81
Identity = 47/69 (68.12%), Postives = 54/69 (78.26%), Query Frame = 1
Query:    1 DEVLLADAEISDAIEYEKVVHKTCKIYNVDRAVCGRIAGVIAKKYGDTGFAGQLNITFIGSLGSHLRAF 207
            D+ +LAD  + DAIE EKVV KT KI NVDRA CGR+AGVIAKKYGDTGFAGQ+N+TF+GS G     F
Sbjct: 1374 DDDILADPLVIDAIENEKVVEKTVKICNVDRAACGRVAGVIAKKYGDTGFAGQVNLTFLGSAGQSFGCF 1442          
BLAST of EY719727 vs. ExPASy Swiss-Prot
Match: GLTB_SPIOL (Ferredoxin-dependent glutamate synthase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 223.016 bits (567), Expect = 1.863e-57
Identity = 121/179 (67.60%), Postives = 137/179 (76.54%), Query Frame = 3
Query:  153 WAAKHNIYWE--SGQSFACFLTPGMNIHLIGEANDYVGKGMAXXXXXXXXXXXXXFCPEEATIVGNTCLYGATGGQIFVRGKAGERFAVRNSLAQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYISRMRMILSSPRSIRK**KVPRVIAPCWAKCS*KALIKAHVEKTG 683
            +A + N+ +E  +GQSFA FLTPGMNI L+GE+NDYVGKGMA             F PE+ATIVGNTCLYGATGGQIFVRGKAGERFAVRNSLA+AVVEGTGDHCCEYMTGGCVV+LGKVGRNVAAGMTGGLAYI      L  P+  ++  K+ RV AP   +   K LI+AHVEKTG
Sbjct: 1292 FAGQLNLTFEGSAGQSFAVFLTPGMNIRLVGESNDYVGKGMAGGELIVTPAENPGFRPEDATIVGNTCLYGATGGQIFVRGKAGERFAVRNSLAEAVVEGTGDHCCEYMTGGCVVILGKVGRNVAAGMTGGLAYILDEDDTL-IPKVNKEIVKIQRVTAPV-GQMQLKNLIEAHVEKTG 1468          

HSP 2 Score: 103.219 bits (256), Expect = 2.151e-21
Identity = 50/69 (72.46%), Postives = 57/69 (82.61%), Query Frame = 1
Query:    1 DEVLLADAEISDAIEYEKVVHKTCKIYNVDRAVCGRIAGVIAKKYGDTGFAGQLNITFIGSLGSHLRAF 207
            D+ +L+D EI DAIE EK+V+KT KI+NVDRAVCGRIAGVIAKKYGDTGFAGQLN+TF GS G     F
Sbjct: 1243 DDQILSDPEIIDAIENEKIVNKTVKIFNVDRAVCGRIAGVIAKKYGDTGFAGQLNLTFEGSAGQSFAVF 1311          
BLAST of EY719727 vs. ExPASy Swiss-Prot
Match: GLTS_SYNY3 (Ferredoxin-dependent glutamate synthase 2 OS=Synechocystis sp. (strain PCC 6803) GN=gltS PE=1 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 5.262e-44
Identity = 100/209 (47.85%), Postives = 121/209 (57.89%), Query Frame = 3
Query:  168 NIYWESGQSFACFLTPGMNIHLIGEANDYVGKGMAXXXXXXXXXXXXXFCPEEATIVGNTCLYGATGGQIFVRGKAGERFAVRNSLAQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYISRMRMILSSPRSIRK**KVPRVIAPCWAKCS*KALIKAHVEKTGRPQRLRLFLQEREN*TSRSFWDPGSPLNEKKPPQRVG 794
            N    +GQSF  F   GM +HL GEANDYVGKGM              F PE+  I+GNTCLYGATGG ++  G+AGERFAVRNS+ +AV+EG GDHCCEYMTGG +VVLG VGRNV AGMTGGLAY   +  +   P  I       + I     +   K+LI AHVE TG P+   +     +      FW    P +EK  P+  G
Sbjct: 1340 NFQGAAGQSFGAFNLDGMTLHLQGEANDYVGKGMNGGEIVIVPHPQASFAPEDNVIIGNTCLYGATGGNLYANGRAGERFAVRNSVGKAVIEGAGDHCCEYMTGGVIVVLGPVGRNVGAGMTGGLAYF--LDEVGDLPEKINPEIITLQRITASKGEEQLKSLITAHVEHTGSPKGKAILANWSD--YLGKFWQ-AVPPSEKDSPEANG 1543          
BLAST of EY719727 vs. ExPASy Swiss-Prot
Match: GLTB_PORPU (Ferredoxin-dependent glutamate synthase OS=Porphyra purpurea GN=gltB PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.433e-41
Identity = 97/192 (50.52%), Postives = 116/192 (60.42%), Query Frame = 3
Query:  111 SGCDREEIWRHWFCWAAKHNIYWESGQSFACFLTPGMNIHLIGEANDYVGKGMAXXXXXXXXXXXXXFCPEEATIVGNTCLYGATGGQIFVRGKAGERFAVRNSLAQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAY-ISRMRMILSSPRSIRK**KVPRVIAPCWAKCS*KALIKAHVEKTG 683
            SG   ++     F    K N Y  +GQSF  FL  G+N+ L+GEANDYVGKGM              +      I+GNTCLYGATGG +F +G+AGERFAVRNSLA++VVEG GDH CEYMTGG +VVLGK GRNV AGMTGGLAY +      +    S  +  KV RVI     +   K LI+ H  KTG
Sbjct: 1306 SGVIAQKYGNEGFKGLIKLNFYGSAGQSFGAFLASGVNLKLMGEANDYVGKGMNGGSIIIVPPAGTTYEDNNQVIIGNTCLYGATGGYLFAQGQAGERFAVRNSLAKSVVEGVGDHACEYMTGGTIVVLGKAGRNVGAGMTGGLAYFLDEENKFIERVNS--EIVKVQRVITKA-GEQQLKNLIENHSAKTG 1494          
BLAST of EY719727 vs. ExPASy Swiss-Prot
Match: GLTB_PORYE (Ferredoxin-dependent glutamate synthase OS=Porphyra yezoensis GN=gltB PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.444e-41
Identity = 93/175 (53.14%), Postives = 111/175 (63.43%), Query Frame = 3
Query:  162 KHNIYWESGQSFACFLTPGMNIHLIGEANDYVGKGMAXXXXXXXXXXXXXFCPEEATIVGNTCLYGATGGQIFVRGKAGERFAVRNSLAQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAY-ISRMRMILSSPRSIRK**KVPRVIAPCWAKCS*KALIKAHVEKTG 683
            K N Y  +GQSF  FL  G+N+ L+GEANDYVGKGM              +      I+GNTCLYGATGG +F +G+AGERFAVRNSLA++VVEG GDH CEYMTGG +VVLGK GRNV AGMTGGLAY +      +    S  +  K+ RVI     +   K LI+ H  KTG
Sbjct: 1323 KLNFYGSAGQSFGAFLASGINLKLMGEANDYVGKGMNGGSIVIVPPAGTIYEDNNQVIIGNTCLYGATGGYLFAQGQAGERFAVRNSLAESVVEGVGDHACEYMTGGVIVVLGKAGRNVGAGMTGGLAYFLDEDENFIDRVNS--EIVKIQRVITKAGEE-QLKNLIENHAAKTG 1494          
BLAST of EY719727 vs. ExPASy Swiss-Prot
Match: GLT1_SCHPO (Putative glutamate synthase [NADPH] OS=Schizosaccharomyces pombe GN=SPAPB1E7.07 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 9.611e-38
Identity = 76/133 (57.14%), Postives = 91/133 (68.42%), Query Frame = 3
Query:  168 NIYWESGQSFACFLTPGMNIHLIGEANDYVGKGMAXXXXXXXXXXXXXFCPEEATIVGNTCLYGATGGQIFVRGKAGERFAVRNSLAQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYISRMRM 566
            N++  +GQSF  FL PG+ + L G+ NDYVGKG++             F PEE  I+GN CLYGAT G  F+ G A ERFAVRNS A AVVEG GDH CEYMTGG VV+LG  GRN AAGM+GG+AY+  M+M
Sbjct: 1359 NVFGSAGQSFGAFLAPGVTLQLEGDCNDYVGKGLSGGRLIIYPPRVSPFKPEENMIIGNVCLYGATSGHAFISGVAAERFAVRNSGAIAVVEGVGDHGCEYMTGGRVVILGSTGRNFAAGMSGGIAYVYDMQM 1491          
BLAST of EY719727 vs. ExPASy Swiss-Prot
Match: GLTB_CYACA (Ferredoxin-dependent glutamate synthase OS=Cyanidium caldarium GN=gltB PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.639e-37
Identity = 93/186 (50.00%), Postives = 114/186 (61.29%), Query Frame = 3
Query:  168 NIYWESGQSFACFLTPGMNIHLIGEANDYVGKGMAXXXXXXXXXXXXXFCPEEATIVGNTCLYGATGGQIFVRGKAGERFAVRNSLAQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYISRMRMILSSPRSIR-K**KVPRVIAPCWAKCS*KALIKAHVEKTGRPQRLRLFLQERE 722
            N Y  +GQSF  F   G+ + LIGEANDYVGK M+             F   E  I+GNTCLYGATGG +F  G AGERFAVRNS A +V+EG GDH CEYMTGG VVVLGK GRN+AAGMTGG+AY   +    + P  +     ++ RV+    A+     LI+ HV KTG  + + L LQ+ E
Sbjct: 1337 NFYGTAGQSFGSFNIKGVTLRLIGEANDYVGKSMSGGEIVIVPPSEVAFDASEQVILGNTCLYGATGGFLFAYGAAGERFAVRNSNAFSVLEGVGDHACEYMTGGRVVVLGKAGRNIAAGMTGGIAYF--LDEYSNLPEKVNLDIVRIQRVVTN-EARKQLIQLIEKHVLKTGSKKAV-LILQQWE 1518          
BLAST of EY719727 vs. ExPASy Swiss-Prot
Match: GLTB_ANTSP (Ferredoxin-dependent glutamate synthase OS=Antithamnion sp. GN=gltB PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.487e-36
Identity = 72/127 (56.69%), Postives = 86/127 (67.72%), Query Frame = 3
Query:  168 NIYWESGQSFACFLTPGMNIHLIGEANDYVGKGMAXXXXXXXXXXXXXFCPEEATIVGNTCLYGATGGQIFVRGKAGERFAVRNSLAQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAY 548
            N    +GQSF  F++ G++++L GEANDYVGKGM                     I+GNTCLYGATGG +F  G+AGERFAVRNS   +VVEG GDH CEYMTGG +VVLG  GRN+ AGMTGG+AY
Sbjct: 1325 NFVGSAGQSFGAFISKGIHLYLKGEANDYVGKGMNGGEIIICPPIEQKTSSSNQVILGNTCLYGATGGYLFANGQAGERFAVRNSNGYSVVEGVGDHACEYMTGGLIVVLGTFGRNIGAGMTGGIAY 1451          

HSP 2 Score: 23.8682 bits (50), Expect = 1.487e-36
Identity = 10/22 (45.45%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  548 HFSNEDDTLLPQVNKEIVKGPK 613
            +F +ED+TL  ++N EIVK  +
Sbjct: 1451 YFLDEDNTLKNKLNTEIVKAQR 1472          
The following BLAST results are available for this feature:
BLAST of EY719727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
GLTB2_ARATH2.570e-8362.31Ferredoxin-dependent glutamate synthase 2, chlorop... [more]
GLTB_MAIZE1.061e-8162.81Ferredoxin-dependent glutamate synthase, chloropla... [more]
GLTB1_ARATH6.812e-8162.02Ferredoxin-dependent glutamate synthase 1, chlorop... [more]
GLTB_SPIOL1.863e-5767.60Ferredoxin-dependent glutamate synthase, chloropla... [more]
GLTS_SYNY35.262e-4447.85Ferredoxin-dependent glutamate synthase 2 OS=Synec... [more]
GLTB_PORPU1.433e-4150.52Ferredoxin-dependent glutamate synthase OS=Porphyr... [more]
GLTB_PORYE2.444e-4153.14Ferredoxin-dependent glutamate synthase OS=Porphyr... [more]
GLT1_SCHPO9.611e-3857.14Putative glutamate synthase [NADPH] OS=Schizosacch... [more]
GLTB_CYACA1.639e-3750.00Ferredoxin-dependent glutamate synthase OS=Cyanidi... [more]
GLTB_ANTSP1.487e-3656.69Ferredoxin-dependent glutamate synthase OS=Antitha... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-702-106-A07-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY719727 ID=EY719727; Name=EY719727; organism=Citrus sinensis; type=EST; length=920bp
GATGAGGTTTTGCTTGCAGATGCTGAGATATCTGATGCAATTGAGTATGA
GAAAGTGGTTCACAAAACCTGTAAGATATACAATGTGGACCGAGCTGTTT
GTGGGCGTATAGCGGGTGTGATCGCGAAGAAATATGGAGACACTGGTTTT
GCTGGGCAGCTAAACATAACATTTATTGGGAGTCTGGGCAGTCATTTGCG
TGCTTTTTGACACCTGGGATGAACATTCACCTGATTGGAGAGGCCAATGA
TTATGTGGGAAAGGGAATGGCTGGAGGTGAGGTTGTAGTGACTCCTGTTG
AGACCACTGGATTTTGCCCTGAGGAAGCAACAATAGTGGGGAATACATGC
TTGTATGGAGCAACTGGTGGTCAAATCTTTGTTAGAGGAAAAGCCGGAGA
GAGGTTTGCCGTGAGAAACTCACTTGCTCAAGCAGTTGTTGAAGGCACTG
GAGATCACTGTTGTGAATACATGACTGGTGGTTGTGTCGTTGTACTTGGA
AAAGTGGGTAGAAATGTTGCTGCTGGAATGACTGGAGGTTTGGCATACAT
TTCTCGAATGAGGATGATACTCTCCTCCCCCAGGTCAATAAGGAAATAGT
GAAAGGTCCCAAGGGTGATTGCTCCCTGTTGGGCCAAATGCAGTTGAAAA
GCCCTTATTAAAGCCCATGTTGAAAAAACTGGGCGACCGCAAAGGCTTCG
GCTATTTCTACAGGAAAGGGAAAACTAAACTTCCCGCTCTTTCTGGGACC
CTGGTTCCCCCCTTAACGAAAAAAAACCCCCCCAAAGGGTTGGGGCAAAA
ATTAGATAAAAACACTCCTACTGGGGGGGGGTGAACTTTTGCCACTCCCC
TTTAAAAAAACAAATTTTTAAAATTTTTAAACAATGGGCCCTCCCCAGGC
CCCGGCCTATCCCAAACACC
back to top