EY719724

Overview
NameEY719724
Unique NameEY719724
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1024
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY719724 vs. ExPASy Swiss-Prot
Match: SNDH_ACELI (L-sorbosone dehydrogenase OS=Acetobacter liquefaciens PE=4 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.166e-26
Identity = 59/115 (51.30%), Postives = 78/115 (67.83%), Query Frame = 3 
Query:   63 PAKVAAAIKPDYSLGSHVAALGVDFSIPA-MGEKYADGVFVGEHGSWNRDNPVGYKVIFVPFSNGRPAGEPLDFATGF-RGDDGKTRGRPVGVTVDPKGALIIADDLANTVWRVT 401
            P  VA+AI PDY+LG H A  G+ FS  + +   + +G+FV +HGSWNR    GY+VI+VPF++G P G P D  TGF   D+    GRPVG+ +D  GAL++ADD+ NTVWRVT
Sbjct:  328 PDLVASAIAPDYALGPHTAWFGIAFSQDSSLPAAWRNGLFVAQHGSWNRKPKSGYRVIYVPFTDGHPDGTPRDVLTGFLTQDEDHAHGRPVGLALDKSGALLVADDVGNTVWRVT 442
[Close]
BLAST of EY719724 vs. ExPASy Swiss-Prot
Match: Y024_BORBU (Uncharacterized protein BB_0024 OS=Borrelia burgdorferi GN=BB_0024 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.059e-11
Identity = 41/110 (37.27%), Postives = 58/110 (52.73%), Query Frame = 3 
Query:   96 YSLGSHVAALGVDF----SIPAMGEKYADGVFVGEHGSWNRDNPVGYKVIFVPF-SNGRPAGEPLDFATGFRGDDGKTRGRPVGVTVDPKGALIIADDLANTVWRVTRNK 410
            Y L +HVA LG+ F    + P   ++Y + +F+ EHGSWNR +PVGYK+  +   S  R A     F  GF   D    GRPV +     G+++  DD  N ++RV   K
Sbjct:  272 YELPAHVAPLGIHFYRGNNFP---KEYINKLFIAEHGSWNRSSPVGYKITTLDIDSKTRTARNYKTFLYGFLKHDKSKFGRPVDIITYYDGSILFTDDFGNKIYRVYYEK 378
The following BLAST results are available for this feature:
BLAST of EY719724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
SNDH_ACELI1.166e-2651.30L-sorbosone dehydrogenase OS=Acetobacter liquefaci... [more]
Y024_BORBU1.059e-1137.27Uncharacterized protein BB_0024 OS=Borrelia burgdo... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-106-A03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY719724 ID=EY719724; Name=EY719724; organism=Citrus sinensis; type=EST; length=1024bp
GGGGCTAATCGGGCCGCGGTCCGGTCGGAATTCCCGGGTCGACCCCGCGC
CCAACCGCAAACCCGGCCAAGGTCGCCGCCGCGATCAAGCCGGATTACAG
CCTGGGTTCCCACGTCGCCGCGCTGGGCGTCGATTTTTCCATCCCGGCCA
TGGGCGAGAAATATGCCGACGGCGTCTTCGTCGGCGAGCACGGCAGCTGG
AACCGGGACAATCCGGTGGGCTACAAGGTGATCTTCGTGCCGTTCAGCAA
TGGCCGGCCTGCCGGTGAGCCGCTGGACTTCGCCACGGGTTTCCGCGGGG
ACGATGGCAAGACTCGCGGGCGGCCGGTGGGGGTCACGGTTGATCCGAAG
GGTGCGCTGATCATTGCCGATGACCTGGCCAACACGGTGTGGAGGGTGAC
GCGCAATAAATAAGGCCTGAAACGGCCGACGTGGTTGCCTTCCTGTGGAG
CGCGGCGGTACCTTCGCCGCACTCACGAACAGGAAGGTAACCGCAATGCC
AGACACCACCGACAACGGCTTCTATGATCGCGCGGACGCGCACATCCAGC
TGTCCAACGAAGCAGTTCAGGGCGTTCGCCGACCTGGGGAAAAGTCAGCG
CCTCGATGATGTTCGGCACCACACCCTTCCATGCCTGGGGTCAGCGGCAC
GCAGCTTTAAATCCGGGGAAAAAAATGGCCCACGGCGCGGAGGGCGAGCC
TAAATAAATCTCTGTGTTCAGAACCCGGAAGAAGCTTGGAGGAAAATTTT
GAAAAATCCACCTCGAACAATTTTTCACCAAGGACATGGCTCTTTAAAAG
GGAAGTTTGAAAAATCTCCCAACCCCGACCCGCCAGCCCTCGCGATGGTT
TGGCAGGGAAACCCCCCCCCCCGCCGTGAAGGATTAACCACCATATTCTC
ATGGGGCGTGTCCCCGACTCCCCTGGGCCCCCCCCGGGGGGGCGTTCCTG
AGTGTTGTTGGATTGCGACCCACCGCCCTTGTTTATTACCTACCATCTTG
AGTCAGGGGAATCGGGGCGTGGCC
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