EY719714

Overview
NameEY719714
Unique NameEY719714
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length952
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY719714 vs. ExPASy Swiss-Prot
Match: SSG1_IPOBA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Ipomoea batatas GN=WAXY PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 3.033e-51
Identity = 92/190 (48.42%), Postives = 112/190 (58.95%), Query Frame = 3
Query:   84 MATAVAASSFVSRSYGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDELQVKTMASKLATSRQAGRNGFRSQNGPSL-MIVCGV-GLNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKGWGKTQSKSMG 641
            MAT + AS FVS   G   +        Q+  R   + H+GLR +N ID LQ++T A K        +NG  ++ G +   IVC   G+N++FVG EV PW KT                  HRVMT+ PRYDQYKDAWDT VV+EL+VGD+IE VRFFH +KRGVDRVFVDHP FL K WGKT S   G
Sbjct:    1 MAT-ITASHFVSHVCGGATSGESKVGLGQLALRSQAVTHNGLRPVNKIDMLQLRTSAKK------PSKNGRENEGGMAAGTIVCKQQGMNLVFVGCEVGPWCKTGGLGDVLGGLPPALAARGHRVMTVCPRYDQYKDAWDTCVVVELQVGDRIEPVRFFHSYKRGVDRVFVDHPMFLEKVWGKTGSMLYG 183          

HSP 2 Score: 66.2402 bits (160), Expect = 3.033e-51
Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 2
Query:  632 IYGPRTGEDYQGHQLPFHLLGRALLEPPKILNLNTNNYFSGTYGEKGVF 778
            +YGP+ G+DY+ +QL F LL +A LE P++LNLN++NYFSG YGE  VF
Sbjct:  181 LYGPKAGKDYKDNQLRFSLLCQAALEAPRVLNLNSSNYFSGPYGEDVVF 229          
BLAST of EY719714 vs. ExPASy Swiss-Prot
Match: SSG1B_HORVU (Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 7.768e-46
Identity = 73/133 (54.89%), Postives = 86/133 (64.66%), Query Frame = 3
Query:  243 MASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKGWGKTQSKSMG 641
            +A + AT+ +  RN  R+    S  IVC  G+ I+FV TEV PW KT                  HRVMTIAPRYDQYKD WDT+V++E+ VGD+ E VRFFHC+KRGVDRVFVDHP FL K WGKT SK  G
Sbjct:   11 LAKRRATNYETHRNSSRT----SSPIVCSTGMPIIFVATEVHPWCKTGGLGDVVGGLPPALAAMGHRVMTIAPRYDQYKDTWDTNVLVEVIVGDRTETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGSKLYG 139          

HSP 2 Score: 60.8474 bits (146), Expect = 7.768e-46
Identity = 28/50 (56.00%), Postives = 36/50 (72.00%), Query Frame = 2
Query:  629 QIYGPRTGEDYQGHQLPFHLLGRALLEPPKILNLNTNNYFSGTYGEKGVF 778
            ++YGP TG D++ +QL F LL  A LE P++LNLN + YFSG YGE  VF
Sbjct:  136 KLYGPTTGTDFRDNQLRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVF 185          
BLAST of EY719714 vs. ExPASy Swiss-Prot
Match: SSG1_SOLTU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum GN=WAXY PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.242e-44
Identity = 108/237 (45.57%), Postives = 135/237 (56.96%), Query Frame = 3
Query:   84 MATAVAASSFVSRSYGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDELQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKGWGKTQSKSMG--LGLERTTRDTNFPSTCWAGHSLNPQKF*ILTPTIIFLEHMGKKAFFV 782
            MA+  A+  FVSRS   + +    S  SQ+  R   + H+GLR++N +D LQ +T      T + A R   + + G S  IVCG G+N++FVGTEV PWSKT                  HRVMTI+PRYDQYKDAWDT V +E+KVGD IE VRFFHC+KRGVDRVFVDHP FL K WGKT SK  G   GL+    +  F   C A  +L   K   L  +  F    G+   F+
Sbjct:    1 MASITASHHFVSRS---QTSLDTKSTLSQIGLRNHTLTHNGLRAVNKLDGLQSRTNTK--VTPKMASRTETK-RPGCSATIVCGKGMNLIFVGTEVGPWSKTGGLGDVLGGLPPALAARGHRVMTISPRYDQYKDAWDTSVAVEVKVGDSIEIVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGSKIYGPKAGLDYLDNELRFSLLCQA--ALEAPKVLNLNSSNYFSGPYGEDVLFI 229          
BLAST of EY719714 vs. ExPASy Swiss-Prot
Match: SSG1_MANES (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.690e-43
Identity = 102/211 (48.34%), Postives = 125/211 (59.24%), Query Frame = 3
Query:   84 MATAVAASSFVSRSYGHEVASGLNSKASQMKF-----RCMKHSGLRSLNIIDELQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKGWGKTQSKSMG--LGLERTTRDTNFPSTCWA 695
            MAT +AA  FVSRS  H     L +KA+ +       + +  +GLRSLN +D+LQ+KT  SK      A  NG      P+  I+CG G+N++FVG EV PWSKT                  HRVMT++PRYDQYKDAWDT V +E+K+GD+IE VRFFH +KRGVDRVFVDHP FL K WGKT SK  G   GL+       F   C A
Sbjct:    1 MATVIAAH-FVSRS-SHLSIHALETKANNLSHTGPWTQTITPNGLRSLNTMDKLQMKTQ-SKAVKKVSATGNG-----RPAAKIICGHGMNLIFVGAEVGPWSKTGGLGDVLGGLPPAMAARGHRVMTVSPRYDQYKDAWDTSVSVEIKIGDRIETVRFFHSYKRGVDRVFVDHPMFLEKVWGKTGSKIYGPRAGLDYQDNQLRFSLLCLA 203          
BLAST of EY719714 vs. ExPASy Swiss-Prot
Match: SSG1_ANTMA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Antirrhinum majus GN=WAXY PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 3.040e-42
Identity = 104/238 (43.70%), Postives = 135/238 (56.72%), Query Frame = 3
Query:   84 MATAVAASSFVSRSYGHEVAS-GLNSKASQMKFRCMK--HSGLRSLNIIDELQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKGWGKTQSKSMG--LGLERTTRDTNFPSTCWAGHSLNPQKF*ILTPTIIFLEHMGKKAFFV 782
            MAT V AS  VS  +G   +S    +  +Q+  R  +  H+GLRS+N++D+LQ++  A +  +  +   NG      P   I+CG G+N++FV  EV PWSKT                  HRVMT++PRYDQYKDAWDT VV+E+KVGD IE VRFFHC+KRGVDRVFVDHP FL K WGKT+SK  G   G +       F   C A  +L   +   LT +  F    G+   FV
Sbjct:    1 MAT-VTASQLVSHVHGGATSSPDTKTNLAQVGLRNQQFTHNGLRSINMVDKLQMRNNAKQSRSLVKKTDNG-----SPLGKIICGTGMNLVFVLAEVGPWSKTGGLGDVVGGLPPAMAGNGHRVMTVSPRYDQYKDAWDTSVVVEIKVGDSIETVRFFHCYKRGVDRVFVDHPIFLEKVWGKTKSKIYGPNAGTDYQDNQLRFSLLCQA--ALEAPRVLNLTSSKYFSGPYGEDVVFV 230          
BLAST of EY719714 vs. ExPASy Swiss-Prot
Match: SSG1_ARATH (Probable granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=WAXY PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 8.845e-42
Identity = 97/209 (46.41%), Postives = 127/209 (60.77%), Query Frame = 3
Query:   84 MATAVAASSFVSRS--YGHEVASGLNSKAS-QMKFRCMKHSGLRSLNIIDELQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKGWGKTQSKSMG--LGLERTTRDTNFPSTCWA 695
            MAT  A+S+FVSR+  + +  AS  +  A   +K + + H GLRS N++D LQ ++ A K  +++ + R+      G    IVC  G++++F+G EV PWSKT                  HRVMTI PRYDQYKDAWDT VV+++KVGDK+E VRFFHC+KRGVDRVFVDHP FLAK  GKT SK  G   G++       F   C A
Sbjct:    1 MATVTASSNFVSRTSLFNNHGASSCSDVAQITLKGQSLTHCGLRSFNMVDNLQRRSQA-KPVSAKSSKRSSKVKTAGK---IVCEKGMSVIFIGAEVGPWSKTGGLGDVLGGLPPALAARGHRVMTICPRYDQYKDAWDTCVVVQIKVGDKVENVRFFHCYKRGVDRVFVDHPIFLAKVVGKTGSKIYGPITGVDYNDNQLRFSLLCQA 205          
BLAST of EY719714 vs. ExPASy Swiss-Prot
Match: SSG1_SORBI (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Sorghum bicolor GN=WAXY PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.553e-36
Identity = 75/160 (46.88%), Postives = 93/160 (58.13%), Query Frame = 3
Query:  222 DELQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKGWGKTQSKSMG--LGLERTTRDTNFPSTCWA 695
            D L ++T A      + A R G R    PSL++    G+N++FVG E+APWSKT                  HRVM ++PRYDQYKDAWDT VV E+K+GD  E VRFFHC+KRGVDRVF+DHP FL + WGKT+ K  G   G +       F   C A
Sbjct:   44 DALSMRTSACPAPRQQPAARRGGRGGRFPSLVVCATAGMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVVSPRYDQYKDAWDTSVVSEIKMGDGYETVRFFHCYKRGVDRVFIDHPLFLERVWGKTEEKIYGPDAGTDYKDNQLRFSLLCQA 203          
BLAST of EY719714 vs. ExPASy Swiss-Prot
Match: SSG1_MAIZE (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Zea mays GN=WAXY PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.237e-35
Identity = 78/168 (46.43%), Postives = 96/168 (57.14%), Query Frame = 3
Query:  198 GLRSLNIIDELQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKGWGKTQSKSMG--LGLERTTRDTNFPSTCWA 695
            G R+    D L ++T A      +Q  R G R    PSL++    G+N++FVG E+APWSKT                  HRVM ++PRYDQYKDAWDT VV E+K+GD  E VRFFHC+KRGVDRVFVDHP FL + WGKT+ K  G   G +       F   C A
Sbjct:   34 GARASAAADTLSMRTSARAAPRHQQQARRGGRF---PSLVVCASAGMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVVSPRYDQYKDAWDTSVVSEIKMGDGYETVRFFHCYKRGVDRVFVDHPLFLERVWGKTEEKIYGPVAGTDYRDNQLRFSLLCQA 198          
BLAST of EY719714 vs. ExPASy Swiss-Prot
Match: SSG1_PEA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.786e-34
Identity = 82/168 (48.81%), Postives = 102/168 (60.71%), Query Frame = 3
Query:  198 GLRSLNIIDELQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKGWGKTQSKSMG--LGLERTTRDTNFPSTCWA 695
            GLRSLN   +L V+T  +   +S  + ++  +        IVCG+ L  +FVG EV PWSKT                  HRVMT++PRYDQYKDAWDT+V++E+KVGDKIE VRFFHC+KRGVDRVFVDHP FL + WGKT SK  G   G++       F   C A
Sbjct:   44 GLRSLN---KLHVRTARATSGSSDTSEKSLGK--------IVCGMSL--VFVGAEVGPWSKTGGLGDVLGGLPPVLAGNGHRVMTVSPRYDQYKDAWDTNVLVEVKVGDKIETVRFFHCYKRGVDRVFVDHPLFLERVWGKTGSKLYGPKTGIDYRDNQLRFSLLCQA 198          
BLAST of EY719714 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSJ (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=WAXY PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.158e-33
Identity = 75/161 (46.58%), Postives = 93/161 (57.76%), Query Frame = 3
Query:  222 DELQVKTMASKLATSRQAGRNGFRSQNGPSLMIVC-GVGLNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKGWGKTQSKSMG--LGLERTTRDTNFPSTCWA 695
            D   +    S  AT +Q       S+  PS+++   G G+N++FVG E+APWSKT                  HRVM I+PRYDQYKDAWDT VV E+KV D+ E+VRFFHC+KRGVDRVF+DHP FL K WGKT  K  G   G++       F   C A
Sbjct:   44 DATSLSVTTSARATPKQQRSVQRGSRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQA 204          
The following BLAST results are available for this feature:
BLAST of EY719714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
SSG1_IPOBA3.033e-5148.42Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1B_HORVU7.768e-4654.89Granule-bound starch synthase 1b, chloroplastic/am... [more]
SSG1_SOLTU4.242e-4445.57Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_MANES4.690e-4348.34Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_ANTMA3.040e-4243.70Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_ARATH8.845e-4246.41Probable granule-bound starch synthase 1, chloropl... [more]
SSG1_SORBI5.553e-3646.88Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_MAIZE1.237e-3546.43Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_PEA1.786e-3448.81Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_ORYSJ1.158e-3346.58Granule-bound starch synthase 1, chloroplastic/amy... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-105-H03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY719714 ID=EY719714; Name=EY719714; organism=Citrus sinensis; type=EST; length=952bp
AGACGCTTGAGCACCAGATTTCATCAGGAAACTAAGAGGGAAACAAATCT
TCAGCAGAGACTACAAACATAATAATATCAGCTATGGCTACCGCTGTAGC
CGCTTCAAGCTTCGTCTCAAGGAGTTATGGACATGAGGTAGCTTCAGGAT
TGAATAGTAAGGCATCACAGATGAAATTTAGGTGTATGAAGCACAGTGGG
CTGAGAAGTTTAAATATCATAGACGAACTCCAAGTGAAAACAATGGCATC
AAAACTAGCCACCAGCAGGCAAGCTGGGAGGAATGGATTTAGAAGCCAGA
ACGGGCCATCCTTAATGATTGTTTGTGGGGTTGGCCTGAATATCCTCTTT
GTTGGAACAGAGGTTGCTCCTTGGAGTAAAACTGGGGGACTTGGTGATGT
TCTTGGAGGTCTGCCACCAGCACTGGCCGCCAATGGGCACCGTGTCATGA
CGATTGCACCCCGATATGACCAGTACAAAGATGCTTGGGATACTGATGTT
GTAATTGAGCTGAAAGTTGGAGACAAAATTGAAAAAGTTCGCTTCTTTCA
TTGCCACAAGAGAGGAGTTGATCGGGTGTTTGTGGATCATCCTTGGTTTC
TTGCGAAGGGGTGGGGTAAAACCCAATCCAAATCTATGGGCCTAGGACTG
GAGAGGACTACCAGGGACACCAACTTCCCTTCCACTTGTTGGGCCGGGCA
CTCCTTGAACCCCCAAAAATTCTAAATCTTAACACCAACAATTATTTTTC
TGGAACATATGGGGAAAAAGGCGTTTTTTGTTGGCTAAGGAAGGGCATAT
TTCCCCTTACCCCTGGTTACCCGGAAAACTATTGTAAAAAACCCCCAAAG
GGAAGGATACAAAAAGGGCCAAAGTTTTGTTTTTTTTGGTACCCCCAAAA
AATTGTCTTACACACAAGGAAAAAAATTTTGCATTTTTAGAGAGATTTTT
TG
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