EY719712

Overview
NameEY719712
Unique NameEY719712
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY719712 vs. ExPASy Swiss-Prot
Match: TPT_PEA (Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.333e-34
Identity = 71/128 (55.47%), Postives = 82/128 (64.06%), Query Frame = 2
Query:  104 NVSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGE--AAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYP**VRFVGFTLPISFCL 481
            N S  S+K  G+V +GGN++WGRQLRP L        A L       LRP  ATA     G+DSAGE   APV FF RYPAL TGFFFF WYFLNVIFNILNK+IYNYFPYP  V  +   + + +CL
Sbjct:   28 NASLPSVKSFGSVSDGGNLVWGRQLRPELCSPVLKKGASL-------LRPCPATAG----GNDSAGEEKVAPVGFFSRYPALTTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCL 144          

HSP 2 Score: 35.4242 bits (80), Expect = 5.333e-34
Identity = 25/56 (44.64%), Postives = 28/56 (50.00%), Query Frame = 3
Query:  570 LGWFNCLVSWAVGPXXXXXXXXXXXXXX*SRFAVCHALGAMFTTNGSFGQVAVSFT 737
            +G   CLVSW VG                   AVCHALG + T+N SF  VAVSFT
Sbjct:  138 VGVVYCLVSWTVGLPKRAPIDGNLLKLL-IPVAVCHALGHV-TSNVSFAAVAVSFT 191          
BLAST of EY719712 vs. ExPASy Swiss-Prot
Match: TPT_FLAPR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.998e-33
Identity = 66/113 (58.41%), Postives = 82/113 (72.57%), Query Frame = 2
Query:  149 GGNVIWGRQLRPALLLESSNAPAGLFAG--KKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYP**VRFVGFTLPISFCL 481
            GGN++WGRQLRP+LL    ++P  L     K+++L+P  ATAS      DSAG+AAPV FF +YP LVTGFFFFMWYFLNVIFNILNK+IYNYFPYP  V  +   + + +CL
Sbjct:   44 GGNLVWGRQLRPSLLNLDHSSPVSLVTKPVKRDVLKPCTATAS------DSAGDAAPVGFFAKYPFLVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSAIHLAVGVVYCL 150          

HSP 2 Score: 31.187 bits (69), Expect = 1.998e-33
Identity = 24/61 (39.34%), Postives = 29/61 (47.54%), Query Frame = 3
Query:  570 LGWFNCLVSWAVGPXXXXXXXXXXXXXX*SRFAVCHALGAMFTTNGSFGQVAVSFTPSHQS 752
            +G   CL  WAVG                   A CHALG + T+N SF  VAVSFT + +S
Sbjct:  144 VGVVYCLGGWAVGLPKRAPMDSNLLKLL-IPVAFCHALGHV-TSNVSFAAVAVSFTHTIKS 202          
BLAST of EY719712 vs. ExPASy Swiss-Prot
Match: TPT_FLATR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.270e-32
Identity = 66/113 (58.41%), Postives = 81/113 (71.68%), Query Frame = 2
Query:  149 GGNVIWGRQLRPALLLESSNAPAGLFAG--KKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYP**VRFVGFTLPISFCL 481
            GGNV+WGRQLRP+LL    ++P  L     K+++L+P  ATAS      DSAG+AAPV F  +YP LVTGFFFFMWYFLNVIFNILNK+IYNYFPYP  V  +   + + +CL
Sbjct:   43 GGNVVWGRQLRPSLLNLDHSSPVSLVTKPVKRDVLKPCSATAS------DSAGDAAPVGFLAKYPFLVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCL 149          

HSP 2 Score: 29.6462 bits (65), Expect = 1.270e-32
Identity = 24/57 (42.11%), Postives = 27/57 (47.37%), Query Frame = 3
Query:  570 LGWFNCLVSWAVG-PXXXXXXXXXXXXXX*SRFAVCHALGAMFTTNGSFGQVAVSFT 737
            +G   CL SW VG P                 F  CHALG + T+N SF  VAVSFT
Sbjct:  143 VGVVYCLGSWTVGLPKRAPVDSNILKLLIPVGF--CHALGHV-TSNVSFAAVAVSFT 196          
BLAST of EY719712 vs. ExPASy Swiss-Prot
Match: TPT1_BRAOB (Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.653e-32
Identity = 67/119 (56.30%), Postives = 81/119 (68.07%), Query Frame = 2
Query:  125 KPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYP**VRFVGFTLPISFCL 481
            KPIG++GEGGN+I GRQLRP LLL+S          K+EIL+P+ A +   AEG DSAGE   V F  +YP LVTG    MWYFLNVIFNILNK+IYNYFPYP  V  +   + + +CL
Sbjct:   42 KPIGSIGEGGNLISGRQLRPLLLLDS-------LPEKREILKPVRAAS---AEGGDSAGETK-VGFLGKYPWLVTGILLLMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCL 149          

HSP 2 Score: 35.4242 bits (80), Expect = 3.653e-32
Identity = 24/57 (42.11%), Postives = 30/57 (52.63%), Query Frame = 3
Query:  567 WLGWFNCLVSWAVGPXXXXXXXXXXXXXX*SRFAVCHALGAMFTTNGSFGQVAVSFT 737
            ++G   CLVSW+VG                   AVCHA+G + T+N SF  VAVSFT
Sbjct:  142 FVGVVYCLVSWSVGLPKRAPVNSDILKVL-IPVAVCHAIGHV-TSNVSFAAVAVSFT 196          
BLAST of EY719712 vs. ExPASy Swiss-Prot
Match: TPT_SPIOL (Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 7.719e-29
Identity = 58/118 (49.15%), Postives = 73/118 (61.86%), Query Frame = 2
Query:  128 PIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYP**VRFVGFTLPISFCL 481
            P+G V +GG++ WGRQLRP LLLE      G    ++E       TA  P   +  +   A   F ++YPALVTG FFFMWYFLNVIFNILNK+IYNYFPYP  V  +   + + +CL
Sbjct:   37 PVGLVKDGGSLTWGRQLRPVLLLEP--VQTGPVCSRRE------KTAVQPCRAASGSSGEAKTGFLEKYPALVTGSFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCL 146          

HSP 2 Score: 33.8834 bits (76), Expect = 7.719e-29
Identity = 23/57 (40.35%), Postives = 29/57 (50.88%), Query Frame = 3
Query:  567 WLGWFNCLVSWAVGPXXXXXXXXXXXXXX*SRFAVCHALGAMFTTNGSFGQVAVSFT 737
            ++G   CL SW+VG                   AVCHA+G + T+N SF  VAVSFT
Sbjct:  139 FVGVVYCLASWSVGLPKRAPMDSKLLKLL-IPVAVCHAIGHV-TSNVSFAAVAVSFT 193          
BLAST of EY719712 vs. ExPASy Swiss-Prot
Match: TPT_SOLTU (Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.133e-28
Identity = 66/122 (54.10%), Postives = 85/122 (69.67%), Query Frame = 2
Query:  116 ISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYP**VRFVGFTLPISFCL 481
            ++ KP+G +  G N+IWGRQLRPA+LLE+S         K+E ++P  A ASS A  SDS+G+A  V FF++   L TGFFFFMWYFLNVIFNILNK+IYNYFPYP  V  +   + + +CL
Sbjct:   45 VTAKPVGPLIAGPNLIWGRQLRPAILLETSP--------KRESIKPCSAAASSSAGSSDSSGDAK-VGFFNK-ATLTTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCL 156          
BLAST of EY719712 vs. ExPASy Swiss-Prot
Match: TPT_MAIZE (Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.133e-28
Identity = 63/121 (52.07%), Postives = 83/121 (68.60%), Query Frame = 2
Query:  119 SLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAGEAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYP**VRFVGFTLPISFCL 481
            ++K   AV +   ++WGRQLRPALLL ++  P+ L   ++  L+P       PA  ++SAGEA  V F ++YPALVTGFFFFMWYFLNVIFNILNK+IYNYFPYP  V  +   + + +CL
Sbjct:   40 TVKCAAAVPDAAPIVWGRQLRPALLLPAALLPS-LQPARRHTLQP-------PAAAAESAGEAKSVGFLEKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSLIHLVVGVVYCL 152          
The following BLAST results are available for this feature:
BLAST of EY719712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
TPT_PEA5.333e-3455.47Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLAPR1.998e-3358.41Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLATR1.270e-3258.41Triose phosphate/phosphate translocator, chloropla... [more]
TPT1_BRAOB3.653e-3256.30Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SPIOL7.719e-2949.15Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SOLTU4.133e-2854.10Triose phosphate/phosphate translocator, chloropla... [more]
TPT_MAIZE4.133e-2852.07Triose phosphate/phosphate translocator, chloropla... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-105-G08-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY719712 ID=EY719712; Name=EY719712; organism=Citrus sinensis; type=EST; length=932bp
AGCCACAGCGGTGACACGATCCCAGTCGCGAGTGCTGTCACGCGCCACCA
CCACCACCACCACCCTTTCAAGCCTCCGAAGATCGCCGCTTGAGAACCAC
CAAAACGTCAGCTTCATCTCGTTGAAGCCGATTGGAGCCGTTGGTGAAGG
CGGGAATGTCATTTGGGGAAGACAGCTACGTCCTGCTCTGCTCCTCGAGA
GCTCCAATGCTCCGGCTGGTCTTTTCGCCGGAAAGAAGGAGATTCTCCGT
CCAATCCTCGCCACCGCTTCTTCTCCTGCCGAAGGAAGCGATTCCGCCGG
AGAAGCTGCTCCGGTCAGATTCTTTGACAGGTATCCGGCCCTCGTGACCG
GGTTCTTCTTCTTCATGTGGTACTTCCTGAACGTGATATTCAACATTCTT
AACAAGAGGATTTACAATTACTTCCCATATCCTTAGTGAGTTCGCTTCGT
TGGGTTCACACTTCCTATTTCGTTTTGTTTGACGATGTGAATTTTATCAA
AAACCCTTTTCCGTTTTACGTATGAAAGTTTTGTTCTGTGCAGTTTTGTG
TCCGTTATTCATTTGTTGGTTGGGGTGGTTTAACTGTTTGGTGAGCTGGG
CTGTGGGGCCTTCCCAAGCGAGCTCCTATTGATTTCAAAACTCCTGAAGC
TCTTAATCCCGGTTTGCTGTGTGTCATGCATTGGGGGCCATGTTTACCAC
CAACGGGTCTTTTGGACAAGTTGCTGTCTCCTTTACCCCTTCCCATCAAA
GCTCCTGGAACCCTTTCTTCAACGGTTGTGGCTTTCCAAATTTCTTCTAA
GGGCCAAAGTTTAACCTTCGAACTCGGGGGGTGGGCCCCTTGGGCCCCGG
GGGGTTATTGGGAAGGTGGCCAGGGGGTAATATTTGAAAGGGAGAGCGGG
CGTTTTTCTTATTGGGGACGGGGGTTTTCTTA
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