EY719599

Overview
NameEY719599
Unique NameEY719599
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY719599 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.893e-21
Identity = 48/85 (56.47%), Postives = 59/85 (69.41%), Query Frame = 1
Query:    1 MLSTIGPFLNTLCWKEWVIGVDPPTSIFYAEYQNVGLASNTSGRVKWAGYRPTLTIDQAAKFTVGNFIQGSEWLAEANVQYQESL 255
            M S IG  LN + W  WV  V+PPT+IFYAEYQN G  ++ S RVKWAGY+PT+T   A +FTV +FIQG EWL  A VQ+  +L
Sbjct:  497 MQSDIGALLNPVGWMSWVPNVEPPTTIFYAEYQNSGPGADVSQRVKWAGYKPTITDRNAEEFTVQSFIQGPEWLPNAAVQFDSTL 581          
BLAST of EY719599 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.801e-15
Identity = 38/84 (45.24%), Postives = 51/84 (60.71%), Query Frame = 1
Query:    1 MLSTIGPFLNTLCWKEWVIGVDPPTSIFYAEYQNVGLASNTSGRVKWAGYRPTLTIDQAAKFTVGNFIQGSEWLAEANVQYQES 252
            M + IG  +    W  WV GVDPP SI Y EY+N G  S+ + RVKWAGY+P ++  +AAKFTV   + G++W+    V  Q S
Sbjct:  503 METVIGAVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLHGADWIPATGVINQLS 586          
BLAST of EY719599 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.093e-12
Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 1
Query:    1 MLSTIGPFLNTLCWKEWVIGVDPPT-SIFYAEYQNVGLASNTSGRVKWAGYRPTLTIDQAAKFTVGNFIQGSE-WLAEA 231
            M S IG F+N   W  W    DPP  +IFY EY+N G  S+ S RVKWAGY+P  + D+AA+FTV  F++G + W+ +A
Sbjct:  883 MQSVIGSFVNPAGWIAWNSTYDPPPRTIFYREYKNSGPGSDLSKRVKWAGYKPISSDDEAARFTVKYFLRGDDNWIPKA 961          
BLAST of EY719599 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.423e-12
Identity = 37/85 (43.53%), Postives = 48/85 (56.47%), Query Frame = 1
Query:    1 MLSTIGPFLNTLCWKEWVIGVDPPTSIFYAEYQNVGLASNTSGRVKWAGYRPTLTIDQAAKFTVGNFIQGSEWLAEANVQYQESL 255
            M S IG  ++   W  W  G     S+FY EY N G  S+ SGRVKW+G  P+LT+ +A KFTV +FI G+ WL    V +   L
Sbjct:  433 MQSFIGGSIHPSGWSPWSGGFGLK-SLFYGEYGNSGPGSSVSGRVKWSGCHPSLTVTEAEKFTVASFIDGNIWLPSTGVSFDPGL 516          
BLAST of EY719599 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.250e-12
Identity = 34/79 (43.04%), Postives = 47/79 (59.49%), Query Frame = 1
Query:    1 MLSTIGPFLNTLCWKEWVIGVDPPTSIFYAEYQNVGLASNTSGRVKWAGYRPTLTIDQAAKFTVGNFIQGSEWLAEANV 237
            +LS +   ++   W EW  G    T+++Y EY+N G  SNT+ RV W GY  T    +  +FTVGNFIQGS+WL   N+
Sbjct:  237 LLSQMESLIDPAGWLEWS-GDFALTTLYYREYKNTGPGSNTTARVTWPGYAVTTNETEVIQFTVGNFIQGSQWLTSYNI 314          
BLAST of EY719599 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.691e-11
Identity = 33/77 (42.86%), Postives = 44/77 (57.14%), Query Frame = 1
Query:   25 LNTLCWKEWVIGVDPPTSIFYAEYQNVGLASNTSGRVKWAGYRPTLTIDQAAKFTVGNFIQGSEWLAEANVQYQESL 255
            +N   W EW  G     +++YAEY N G  S+T+ RVKW GY    +  Q ++FTVGNFI G+ WL   NV +   L
Sbjct:  435 INPAGWMEWS-GDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 510          
The following BLAST results are available for this feature:
BLAST of EY719599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
PME3_PHAVU4.893e-2156.47Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME1_ARATH1.801e-1545.24Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME26_ARATH1.093e-1248.10Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME16_ARATH5.423e-1243.53Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME_ACTDE9.250e-1243.04Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME2_CITSI2.691e-1142.86Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-104-C10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY719599 ID=EY719599; Name=EY719599; organism=Citrus sinensis; type=EST; length=932bp
ATGCTATCCACAATTGGGCCATTCTTGAACACATTATGCTGGAAAGAATG
GGTCATCGGCGTAGACCCACCCACATCCATATTCTATGCTGAGTACCAAA
ACGTTGGACTGGCATCCAACACTTCTGGACGGGTTAAATGGGCTGGTTAT
AGGCCCACTCTCACAATAGACCAGGCTGCGAAATTTACGGTGGGGAATTT
TATACAAGGCAGTGAATGGTTGGCGGAGGCTAACGTGCAATATCAAGAAT
CCCTGTGATCTTACAGTGGGTTCAGTAATGGTAGATACTTCAAGTCCGAA
AAATCAAATACTGGTTTAATGGTTTCTTTTTTTTTCACACTAAACTTGTT
TCTAGCAAAGTTTGTTATACTGTGTGGGTTTATGTATGAGTATGTCTGCT
TGTTCTATTAATCCTTAATTAACAGTAATTTTGTAACATTTTTCAAAATA
GTGATTGGATTGAACACATAAAAATAAGACAATTTAACACATTGAAAATT
AGATAACCCACACTAATAAAATGACTCGGGGTCGCCACTCTAAAAGGATA
CAAAGCTTACAACCCCGTGCATGGCAATTCATAACTCTTTCCAATAGGGC
AACCAACATTCAAATTCCCTGGCACGGCTTTTTTATCACAACCAATTAGT
AAAAGACAAGAGGGCCATCCACCTAACACCCCCGTTGCACCATATTCCCA
CCTTTCACCTACATATTGAAAATATAAAAGAGATTGAGCACATTTTTGTC
GATATACAAAATTATGTCAAGTCCTATAAAATATAAATATAATACCACTC
CGATTTGTTACGCAATACTACCACCAATAACACCTCAAAACACACACCCC
AACGCTCTCACATACCCCGCCCCCAAGTATCCACACCCAATCACCACTGC
ACCATTATTTCCCCCAGATGCATAAACAATCC
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