EY719588

Overview
NameEY719588
Unique NameEY719588
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length945
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY719588 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.175e-62
Identity = 110/142 (77.46%), Postives = 127/142 (89.44%), Query Frame = 3
Query:    6 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSFPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG---RNVCGVDSMVSSVAAIHTT 422
            EKDYPYTG+DG  CKFDKSKI A+V NFSV+S DE Q++ANL+KHGPLA+GINA +MQTYIGGVS PYICG++LDHGVL+VGYG+SGFAPIR K+KPYWIIKNSWGENWGENGYYKIC G   RN CGVDSMVS+V+A+H +
Sbjct:  229 EKDYPYTGSDG-KCKFDKSKIVASVQNFSVVSVDEAQISANLIKHGPLAIGINAAYMQTYIGGVSCPYICGRHLDHGVLLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMVSTVSAVHAS 369          
BLAST of EY719588 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 236.884 bits (603), Expect = 1.299e-61
Identity = 109/141 (77.30%), Postives = 127/141 (90.07%), Query Frame = 3
Query:    3 REKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSFPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 425
            REKDYPYTGTDGGSCK D+SKI A+VSNFSV+S +EDQ+AANL+K+GPLAV INA +MQTYIGGVS PYIC + L+HGVL+VGYGS+GF+  R KEKPYWIIKNSWGE+WGENG+YKIC GRN+CGVDS+VS+VAA  TTS
Sbjct:  223 REKDYPYTGTDGGSCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINAAYMQTYIGGVSCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSLVSTVAA--TTS 361          
BLAST of EY719588 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 8.422e-61
Identity = 107/142 (75.35%), Postives = 127/142 (89.44%), Query Frame = 3
Query:    3 REKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSFPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTSS 428
            +E+DYPYTG DG +CK DKSKI A+VSNFSVIS DE+Q+AANLVK+GPLAV INA +MQTYIGGVS PYIC + L+HGVL+VGYG++G+AP RFKEKPYWIIKNSWGE WGENG+YKIC GRN+CGVDSMVS+VAA  +T++
Sbjct:  226 KEEDYPYTGKDGKTCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINAGYMQTYIGGVSCPYICTRRLNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSMVSTVAATVSTTA 367          
BLAST of EY719588 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.995e-58
Identity = 105/137 (76.64%), Postives = 119/137 (86.86%), Query Frame = 3
Query:    3 REKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSFPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAA 410
            +EKDY YTG DG SCKFDKSK+ A+VSNFSV++ DEDQ+AANLVK+GPLAV INA WMQTY+ GVS PY+C K  LDHGVL+VG+G   +APIR KEKPYWIIKNSWG+NWGE GYYKIC GRNVCGVDSMVS+VAA
Sbjct:  223 QEKDYAYTGRDG-SCKFDKSKVVASVSNFSVVTLDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSCPYVCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVDSMVSTVAA 358          
BLAST of EY719588 vs. ExPASy Swiss-Prot
Match: PAPA5_CARPA (Cysteine proteinase (Fragment) OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 3.215e-44
Identity = 78/95 (82.11%), Postives = 88/95 (92.63%), Query Frame = 3
Query:  141 GPLAVGINAVWMQTYIGGVSFPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 425
            GPLAV INA +MQTYIGGVS PYIC + L+HGVL+VGYGS+G+APIR KEKPYW+IKNSWGENWGENGYYKIC GRN+CGVDSMVS+VAA+HTTS
Sbjct:    1 GPLAVAINAAYMQTYIGGVSCPYICSRRLNHGVLLVGYGSAGYAPIRLKEKPYWVIKNSWGENWGENGYYKICRGRNICGVDSMVSTVAAVHTTS 95          
BLAST of EY719588 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 3.230e-28
Identity = 64/133 (48.12%), Postives = 81/133 (60.90%), Query Frame = 3
Query:    6 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSFPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 401
            E  YPYT   G  C F+ + I A +SNF++I  +E  MA  +V  GPLA+  +AV  Q YIGGV F   C    LDHG+LIVGY +     I  K  PYWI+KNSWG +WGE GY  +  G+N CGV + VS+
Sbjct:  211 ESSYPYTAETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGV-FDIPCNPNSLDHGILIVGYSAKN--TIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVST 340          
BLAST of EY719588 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 4.366e-25
Identity = 62/136 (45.59%), Postives = 82/136 (60.29%), Query Frame = 3
Query:    6 EKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSFPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 401
            E +YPY       C F+++     V+ F  +   +E  M   L+ +GP+++GINA  MQ Y GGVS P+  +C K  LDHGVL+VGYG S + P   K  PYWI+KNSWG  WGE GYY++  G N CGV  M +S
Sbjct:  477 EAEYPYKAKKN-QCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLANGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDY-PNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATS 610          
BLAST of EY719588 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.553e-22
Identity = 58/135 (42.96%), Postives = 78/135 (57.78%), Query Frame = 3
Query:    6 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSFPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 401
            E DY Y G    SC F   K    +++   +S +E ++AA L K GP++V INA  MQ Y  G+S P   +C  +L DH VL+VGYG+         + P+W IKNSWG +WGE GYY +  G   CGV++M SS
Sbjct:  354 EDDYSYQG-HMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRS-------DVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASS 480          
BLAST of EY719588 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.314e-21
Identity = 52/135 (38.52%), Postives = 82/135 (60.74%), Query Frame = 3
Query:    6 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSFPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 401
            E +YPY   +   C      +A  +++   ++ DE ++AA L  +  ++VG+NA+ +Q Y  G+S P+   C KYL DH VL+VGYG S       K +P+WI+KNSWG  WGENGY+++  G   CG++++ +S
Sbjct:  188 EDNYPYDAKNE-KCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSE------KNEPFWIVKNSWGVEWGENGYFRMYRGDGSCGINTVATS 315          
BLAST of EY719588 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.928e-21
Identity = 54/135 (40.00%), Postives = 78/135 (57.78%), Query Frame = 3
Query:    6 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSFPY--ICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 401
            E DY Y G    +C F        +++   +S +E+++AA L + GP++V INA  MQ Y  G++ P+  +C   ++DH VL+VGYG+           PYW IKNSWG +WGE GYY +  G   CGV++M SS
Sbjct:  332 EDDYGYQG-HVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNRS-------NIPYWAIKNSWGSDWGEEGYYYLYRGSGACGVNTMASS 458          
The following BLAST results are available for this feature:
BLAST of EY719588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
CYSP1_MAIZE1.175e-6277.46Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
A494_ARATH1.299e-6177.30Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
RD19A_ARATH8.422e-6175.35Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
CYSP_PEA2.995e-5876.64Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
PAPA5_CARPA3.215e-4482.11Cysteine proteinase (Fragment) OS=Carica papaya PE... [more]
CYSP1_DICDI3.230e-2848.12Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CPR1_DROME4.366e-2545.59Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATF_HUMAN1.553e-2242.96Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CATL_SCHMA1.314e-2138.52Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CATF_MOUSE2.928e-2140.00Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-104-B09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY719588 ID=EY719588; Name=EY719588; organism=Citrus sinensis; type=EST; length=945bp
AGCGAGAGAAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAA
TTTGACAAAAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTC
CTCTGATGAAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGG
CAGTGGGTATCAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCA
TTCCCATACATTTGCGGGAAGTATTTGGATCATGGAGTGCTTATCGTGGG
CTATGGATCCTCAGGTTTCGCCCCGATCAGATTCAAGGAGAAGCCTTACT
GGATCATAAAGAACTCCTGGGGAGAGAACTGGGGAGAGAATGGATATTAT
AAGATCTGCATGGGTCGCAATGTCTGTGGGGTCGACTCCATGGTCTCATC
TGTAGCTGCTATCCATACAACCTCAAGCTAAACATTATGGAGGTTGTGCT
AGGCAAGTGGAGCTTCTGTACCTAAATATTATAGGATATCCTTTTAAATA
ATCCGTCTGCAATTATAACGATGCCTACATGCCCTGGGCTGAGGCATGAA
CTTTCTATGCTCTTTGTAATATTTAAGCATATGGTCATGTCAGAATGTAA
TATTTATCTATTTTAATATTAACCATGCTACAGAATTGTTATTGAAGAAT
GGATTAATATTTACTTTTTTAATGGGGCAAGGTTGTAAAAAAAATAAAAA
TGGTAATTTTTCCTTTTTATGTAACCCGAATAAGAAAAACTTCCTTGTAT
GCTTTTTAAAAAAAAAAAAAAAACAAAAGGGGGGGCCCCCCTTTTTTTTT
TTTTTTTTTTTTTATTTTAATTCCTCAAAAAAATAAATAAATAATATCTA
AAAAACAAATACAAAATTCAAATTAATAACGATTACAAACAGATTGATGT
ATTGGATAGTCACACACACACGGAAACTCTAAGGAAACTAAAATC
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