EY719587

Overview
NameEY719587
Unique NameEY719587
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY719587 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 9.830e-23
Identity = 57/77 (74.03%), Postives = 60/77 (77.92%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGQNALEN*CLQYEEHCQGREESAPKLDPADKKK 232
            TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYK+EDEEHKKKVE +NALEN         Q  E+   KL  ADKKK
Sbjct:  500 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIQD-EKIGEKLPAADKKK 575          
BLAST of EY719587 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 4.130e-21
Identity = 54/77 (70.13%), Postives = 59/77 (76.62%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGQNALEN*CLQYEEHCQGREESAPKLDPADKKK 232
            TTGQKNKI ITNDKGRLSK+EIEKMVQEAEKYK+EDEEHKKKVE +NALEN         +  E+   KL  ADKKK
Sbjct:  500 TTGQKNKIRITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVESKNALENYAYNMRNIVKD-EKIGAKLSEADKKK 575          
BLAST of EY719587 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.394e-21
Identity = 54/77 (70.13%), Postives = 59/77 (76.62%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGQNALEN*CLQYEEHCQGREESAPKLDPADKKK 232
            TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYK+EDEEHKKKV+ +NALEN         +  E+   KL   DKKK
Sbjct:  500 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVDAKNALENYAYNMRNTIRD-EKIGEKLAGDDKKK 575          
BLAST of EY719587 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 5.394e-21
Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGQNALEN*CLQYEEHCQGREESAPKLDPADKKK 232
            TTG+KNKITITNDKGRLSK++IEKMVQEAEKYK+EDEEHKKKVE +NALEN         +  E+   KL  ADKKK
Sbjct:  500 TTGKKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIRD-EKIGEKLPAADKKK 575          
BLAST of EY719587 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.202e-20
Identity = 53/77 (68.83%), Postives = 59/77 (76.62%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGQNALEN*CLQYEEHCQGREESAPKLDPADKKK 232
            TTGQKNKITITNDKGRLSK+EIEKMVQEAEKYK+EDEEHKKKVE +NALEN         +  E+ A KL   D+ K
Sbjct:  500 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKD-EKIASKLSADDRTK 575          
BLAST of EY719587 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 4.566e-20
Identity = 53/77 (68.83%), Postives = 59/77 (76.62%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGQNALEN*CLQYEEHCQGREESAPKLDPADKKK 232
            TTGQKNKITITNDKGRLSK+EIEKMVQEAEKYKAEDEE KKKV+ +NALEN         +  ++ A KL   DKKK
Sbjct:  496 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEVKKKVDAKNALENYAYNMRNTIKD-DKIASKLPAEDKKK 571          
BLAST of EY719587 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.964e-20
Identity = 53/77 (68.83%), Postives = 58/77 (75.32%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGQNALEN*CLQYEEHCQGREESAPKLDPADKKK 232
            TTGQKNKITITNDKGRLSK+EIEKMVQEAEKYKAEDEE KKKVE +N+LEN         +  E+   KL   DKKK
Sbjct:  502 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEELKKKVEAKNSLENYAYNMRNTVKD-EKIGSKLSSDDKKK 577          
BLAST of EY719587 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.594e-19
Identity = 50/77 (64.94%), Postives = 59/77 (76.62%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGQNALEN*CLQYEEHCQGREESAPKLDPADKKK 232
            TTGQKNKITITNDKGRLSK+EIE+MVQEAEKYK+EDEE KKKVE +NALEN         +  ++   +L  ADKK+
Sbjct:  500 TTGQKNKITITNDKGRLSKEEIERMVQEAEKYKSEDEELKKKVEAKNALENYAYNMRNTIKD-DKINSQLSAADKKR 575          
BLAST of EY719587 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.918e-18
Identity = 51/78 (65.38%), Postives = 58/78 (74.36%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGQNALEN*CLQYEEHCQGREESAP-KLDPADKKK 232
            T G KNKITITND GRLSKDEIEK+V+EAEKYKAEDEE KKKVE +NALEN    Y      +++  P KLD  DK+K
Sbjct:  502 TAGVKNKITITNDNGRLSKDEIEKLVKEAEKYKAEDEEVKKKVEAKNALEN--YAYNMRNTIKDDKIPGKLDAGDKEK 577          
BLAST of EY719587 vs. ExPASy Swiss-Prot
Match: HSP70_LUPPO (Heat shock 70 kDa protein (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 2.506e-18
Identity = 50/77 (64.94%), Postives = 56/77 (72.73%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEGQNALEN*CLQYEEHCQGREESAPKLDPADKKK 232
            TTGQKNKITITNDKGRLSK++IEKMVQE EKYKAEDEE KKKV+ +NALEN            ++   KL   DKKK
Sbjct:  108 TTGQKNKITITNDKGRLSKEDIEKMVQEVEKYKAEDEEVKKKVDTKNALENYAYSMRNTITD-DKITSKLPTEDKKK 183          
The following BLAST results are available for this feature:
BLAST of EY719587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
HSP71_ARATH9.830e-2374.03Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP7E_SPIOL4.130e-2170.13Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP73_ARATH5.394e-2170.13Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP72_ARATH5.394e-2168.83Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP72_SOLLC1.202e-2068.83Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP70_MAIZE4.566e-2068.83Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP71_SOLLC5.964e-2068.83Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP7C_PETHY6.594e-1964.94Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP70_DAUCA1.918e-1865.38Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]
HSP70_LUPPO2.506e-1864.94Heat shock 70 kDa protein (Fragment) OS=Lupinus po... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-702-104-B08-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY719587 ID=EY719587; Name=EY719587; organism=Citrus sinensis; type=EST; length=544bp
GACAACGGGCCAAAAGAACAAGATCACAATCACCAACGATAAGGGTAGAT
TGTCAAAGGATGAAATTGAGAAGATGGTTCAAGAGGCCGAGAAGTACAAG
GCTGAAGACGAGGAGCACAAGAAAAAGGTCGAGGGCCAGAATGCCTTGGA
AAACTAATGCCTACAATATGAGGAACACTGTCAAGGACGAGAAGAATCGG
CTCCCAAACTTGATCCCGCTGACAAAAAGAAAAATTGAGGATGCCATTGA
TCAAGGCAATTCAATGGGCTTGGAAACCAACCAGCTGGGTTGAAGGCCGA
ATAAATTTTGAAAACAAGAATGAAGGGACCTTTGAGAGCCTCCTGCAATC
CCCCTCCTTGGCCAAAAGGTATCAAGGGGGCTGGTGGGGGATATGGGCGG
GGGGCATGGGATGAATAAACCTCCTCCCAACTGGGGGGGCATGGCCCCGC
CGGGTCCCCAAAAAATTGGAGAAAATTAAAAAAAAAATTTTCAGATTTTT
ATTTTTTTATTAGGGTTTTGGGGAGGGAGACGCCGACACACATT
back to top