EY719583
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY719583 vs. ExPASy Swiss-Prot
Match: RDGC_PSEFS (Recombination-associated protein rdgC OS=Pseudomonas fluorescens (strain SBW25) GN=rdgC PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 6.266e-49 Identity = 103/126 (81.75%), Postives = 103/126 (81.75%), Query Frame = -2 Query: 23 MWFKNLLIYRLTQDLPVDXXXXXXXXXXXXARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDXXXXXXXXXXXEQMRKVYKKERDQIKDEIIQAFLPRAFIRRSST 400 MWFKNLLIYRLTQDLPVD ARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRD EQMRKVYKKERDQIKDEIIQAFLPRAFIRRSST Sbjct: 1 MWFKNLLIYRLTQDLPVDAEALEAAMATKLARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDALKEKVEEIEAEQMRKVYKKERDQIKDEIIQAFLPRAFIRRSST 126
BLAST of EY719583 vs. ExPASy Swiss-Prot
Match: RDGC_PSEPF (Recombination-associated protein rdgC OS=Pseudomonas fluorescens (strain Pf0-1) GN=rdgC PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.396e-48 Identity = 102/126 (80.95%), Postives = 103/126 (81.75%), Query Frame = -2 Query: 23 MWFKNLLIYRLTQDLPVDXXXXXXXXXXXXARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDXXXXXXXXXXXEQMRKVYKKERDQIKDEIIQAFLPRAFIRRSST 400 MWFKNLLIYRLTQDLPVD ARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLI+ARKEERILPGSVVRD EQMRKVYKKERDQIKDEIIQAFLPRAFIRRSST Sbjct: 1 MWFKNLLIYRLTQDLPVDAEALETALATKLARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLISARKEERILPGSVVRDAVKEKVEEIEAEQMRKVYKKERDQIKDEIIQAFLPRAFIRRSST 126
BLAST of EY719583 vs. ExPASy Swiss-Prot
Match: RDGC_PSEF5 (Recombination-associated protein rdgC OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rdgC PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 4.490e-47 Identity = 99/126 (78.57%), Postives = 101/126 (80.16%), Query Frame = -2 Query: 23 MWFKNLLIYRLTQDLPVDXXXXXXXXXXXXARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDXXXXXXXXXXXEQMRKVYKKERDQIKDEIIQAFLPRAFIRRSST 400 MWFKNLLIYRLTQDLP D ARPCASQELTTYGFVAPFGKGEDAPLVHVS DF+L+AARKEERILPGSVVRD EQMRKVYKKERDQIKDEIIQAFLPRAFIRRSST Sbjct: 1 MWFKNLLIYRLTQDLPFDAEALETALATKLARPCASQELTTYGFVAPFGKGEDAPLVHVSQDFMLVAARKEERILPGSVVRDAVKEKVEEIEAEQMRKVYKKERDQIKDEIIQAFLPRAFIRRSST 126
BLAST of EY719583 vs. ExPASy Swiss-Prot
Match: RDGC_PSESM (Recombination-associated protein rdgC OS=Pseudomonas syringae pv. tomato GN=rdgC PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.597e-44 Identity = 94/126 (74.60%), Postives = 99/126 (78.57%), Query Frame = -2 Query: 23 MWFKNLLIYRLTQDLPVDXXXXXXXXXXXXARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDXXXXXXXXXXXEQMRKVYKKERDQIKDEIIQAFLPRAFIRRSST 400 MWFKNLLIYRLTQD+P D AR CASQE+ TYGFVAPFGKGEDAPLVH+S DFLLIAARKEERILPGSVVRD EQMRKVYKKERDQ+KDEIIQAFLPRAFIRRS+T Sbjct: 1 MWFKNLLIYRLTQDVPFDAEALETALATKPARACASQEVATYGFVAPFGKGEDAPLVHISQDFLLIAARKEERILPGSVVRDALKEKVDEIEAEQMRKVYKKERDQLKDEIIQAFLPRAFIRRSAT 126
BLAST of EY719583 vs. ExPASy Swiss-Prot
Match: RDGC_PSE14 (Recombination-associated protein rdgC OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rdgC PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 2.086e-44 Identity = 93/126 (73.81%), Postives = 99/126 (78.57%), Query Frame = -2 Query: 23 MWFKNLLIYRLTQDLPVDXXXXXXXXXXXXARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDXXXXXXXXXXXEQMRKVYKKERDQIKDEIIQAFLPRAFIRRSST 400 MWFKNLL+YRLTQD+P D AR CASQE+ TYGFVAPFGKGEDAPLVH+S DFLLIAARKEERILPGSVVRD EQMRKVYKKERDQ+KDEIIQAFLPRAFIRRS+T Sbjct: 1 MWFKNLLVYRLTQDVPFDAEALETALATKPARACASQEVATYGFVAPFGKGEDAPLVHISQDFLLIAARKEERILPGSVVRDALKEKVDEIEAEQMRKVYKKERDQLKDEIIQAFLPRAFIRRSAT 126
BLAST of EY719583 vs. ExPASy Swiss-Prot
Match: RDGC_PSEU2 (Recombination-associated protein rdgC OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rdgC PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 3.558e-44 Identity = 92/126 (73.02%), Postives = 99/126 (78.57%), Query Frame = -2 Query: 23 MWFKNLLIYRLTQDLPVDXXXXXXXXXXXXARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDXXXXXXXXXXXEQMRKVYKKERDQIKDEIIQAFLPRAFIRRSST 400 MWFKNLL+YRLTQD+P D AR CASQE+ TYGFVAPFGKGEDAPLVH+S DF+LIAARKEERILPGSVVRD EQMRKVYKKERDQ+KDEIIQAFLPRAFIRRS+T Sbjct: 1 MWFKNLLVYRLTQDVPFDAEALETALATKPARACASQEVATYGFVAPFGKGEDAPLVHISQDFMLIAARKEERILPGSVVRDALKEKVDEIEAEQMRKVYKKERDQLKDEIIQAFLPRAFIRRSAT 126
BLAST of EY719583 vs. ExPASy Swiss-Prot
Match: RDGC_PSEE4 (Recombination-associated protein rdgC OS=Pseudomonas entomophila (strain L48) GN=rdgC PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.766e-43 Identity = 93/124 (75.00%), Postives = 96/124 (77.42%), Query Frame = -2 Query: 29 MWFKNLLIYRLTQDLPVDXXXXXXXXXXXXARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDXXXXXXXXXXXEQMRKVYKKERDQIKDEIIQAFLPRAFIRRS 400 MWFKNLL YRLTQD+P + ARPCASQELTTYGFVAPFGKG DAPLVHVSG+FLLIAARKEERILP SVV D EQMRKVYKKERDQIKDEIIQAFLPRAFIRRS Sbjct: 1 MWFKNLLTYRLTQDVPFEPEALEAALASKPARPCASQELTTYGFVAPFGKGADAPLVHVSGEFLLIAARKEERILPSSVVNDAVKEKVEEIETEQMRKVYKKERDQIKDEIIQAFLPRAFIRRS 124
BLAST of EY719583 vs. ExPASy Swiss-Prot
Match: RDGC_PSEPK (Recombination-associated protein rdgC OS=Pseudomonas putida (strain KT2440) GN=rdgC PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 2.306e-43 Identity = 92/124 (74.19%), Postives = 97/124 (78.23%), Query Frame = -2 Query: 29 MWFKNLLIYRLTQDLPVDXXXXXXXXXXXXARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDXXXXXXXXXXXEQMRKVYKKERDQIKDEIIQAFLPRAFIRRS 400 MWFKNLL YRLTQ++P + ARPCASQELTTYGFVAPFGKGEDAPLVHVSG++LLIAARKEERILP SVV D EQMRKVYKKERDQIKDEIIQAFLPRAFIRRS Sbjct: 1 MWFKNLLTYRLTQEVPFEPEALEAALASKPARPCASQELTTYGFVAPFGKGEDAPLVHVSGEYLLIAARKEERILPSSVVNDAVKEKVEEIETEQMRKVYKKERDQIKDEIIQAFLPRAFIRRS 124
BLAST of EY719583 vs. ExPASy Swiss-Prot
Match: RDGC_PSEPG (Recombination-associated protein rdgC OS=Pseudomonas putida (strain GB-1) GN=rdgC PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 2.306e-43 Identity = 92/124 (74.19%), Postives = 97/124 (78.23%), Query Frame = -2 Query: 29 MWFKNLLIYRLTQDLPVDXXXXXXXXXXXXARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDXXXXXXXXXXXEQMRKVYKKERDQIKDEIIQAFLPRAFIRRS 400 MWFKNLL YRLTQ++P + ARPCASQELTTYGFVAPFGKGEDAPLVHVSG++LLIAARKEERILP SVV D EQMRKVYKKERDQIKDEIIQAFLPRAFIRRS Sbjct: 1 MWFKNLLTYRLTQEVPFEPEALEAALASKPARPCASQELTTYGFVAPFGKGEDAPLVHVSGEYLLIAARKEERILPSSVVNDAVKEKVEEIETEQMRKVYKKERDQIKDEIIQAFLPRAFIRRS 124
BLAST of EY719583 vs. ExPASy Swiss-Prot
Match: RDGC_PSEAE (Recombination-associated protein rdgC OS=Pseudomonas aeruginosa GN=rdgC PE=1 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 8.763e-43 Identity = 89/126 (70.63%), Postives = 96/126 (76.19%), Query Frame = -2 Query: 23 MWFKNLLIYRLTQDLPVDXXXXXXXXXXXXARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLIAARKEERILPGSVVRDXXXXXXXXXXXEQMRKVYKKERDQIKDEIIQAFLPRAFIRRSST 400 MWF+NLL+YRLTQDL +D ARPCASQELTTYGF APFGKG DAPLVHVS DF LI+ARKEERILPGSVVRD +QMRKVYKKERDQ+KDEI+Q LPRAFIRRSST Sbjct: 1 MWFRNLLVYRLTQDLQLDADSLEKALGEKSARPCASQELTTYGFTAPFGKGPDAPLVHVSQDFFLISARKEERILPGSVVRDALKEKVDEIEAQQMRKVYKKERDQLKDEIVQTLLPRAFIRRSST 126 The following BLAST results are available for this feature:
BLAST of EY719583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >EY719583 ID=EY719583; Name=EY719583; organism=Citrus sinensis; type=EST; length=1007bpback to top |