EY750497

Overview
NameEY750497
Unique NameEY750497
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length984
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY750497 vs. ExPASy Swiss-Prot
Match: SYH_ORYSJ (Histidyl-tRNA synthetase OS=Oryza sativa subsp. japonica GN=Os05g0150900 PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.714e-40
Identity = 76/87 (87.36%), Postives = 82/87 (94.25%), Query Frame = 2
Query:   26 DTNESRRLPKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVP 286
            +TNE RRLPK+PKGTRDF KEQMA+RE AFSIIT VFK HGA++LDTPVFE+RETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVP
Sbjct:  345 ETNEVRRLPKIPKGTRDFGKEQMAIREHAFSIITGVFKMHGAVSLDTPVFELRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVP 431          

HSP 2 Score: 28.8758 bits (63), Expect = 1.714e-40
Identity = 14/25 (56.00%), Postives = 17/25 (68.00%), Query Frame = 3
Query:  264 YDMT*LFPFARYVDMNGLTSFKTQQ 338
            YD+T   PFARYV MN ++S K  Q
Sbjct:  426 YDLT--VPFARYVAMNNISSLKRYQ 448          
BLAST of EY750497 vs. ExPASy Swiss-Prot
Match: SYHC_PONAB (Histidyl-tRNA synthetase, cytoplasmic OS=Pongo abelii GN=HARS PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.816e-31
Identity = 61/87 (70.11%), Postives = 71/87 (81.61%), Query Frame = 2
Query:   26 DTNESRRLPKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVP 286
            D ++ + + K PKGTRD++  QMAVREK F +I   FKRHGA  +DTPVFE++ETLMGKYGEDSKLIYDL DQGGEL SLRYDLTVP
Sbjct:   48 DESKQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQGGELLSLRYDLTVP 134          

HSP 2 Score: 26.9498 bits (58), Expect = 5.816e-31
Identity = 13/22 (59.09%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  264 YDMT*LFPFARYVDMNGLTSFK 329
            YD+T   PFARY+ MN LT+ K
Sbjct:  129 YDLT--VPFARYLAMNKLTNIK 148          
BLAST of EY750497 vs. ExPASy Swiss-Prot
Match: SYHC_HUMAN (Histidyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=HARS PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 5.816e-31
Identity = 61/87 (70.11%), Postives = 71/87 (81.61%), Query Frame = 2
Query:   26 DTNESRRLPKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVP 286
            D ++ + + K PKGTRD++  QMAVREK F +I   FKRHGA  +DTPVFE++ETLMGKYGEDSKLIYDL DQGGEL SLRYDLTVP
Sbjct:   48 DESKQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQGGELLSLRYDLTVP 134          

HSP 2 Score: 26.9498 bits (58), Expect = 5.816e-31
Identity = 13/22 (59.09%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  264 YDMT*LFPFARYVDMNGLTSFK 329
            YD+T   PFARY+ MN LT+ K
Sbjct:  129 YDLT--VPFARYLAMNKLTNIK 148          
BLAST of EY750497 vs. ExPASy Swiss-Prot
Match: SYHC_MOUSE (Histidyl-tRNA synthetase, cytoplasmic OS=Mus musculus GN=Hars PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.691e-30
Identity = 60/87 (68.97%), Postives = 69/87 (79.31%), Query Frame = 2
Query:   26 DTNESRRLPKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVP 286
            D  + + + K PKGTRD++  QMAVREK F +I   FKRHGA  +DTPVFE++ETL GKYGEDSKLIYDL DQGGEL SLRYDLTVP
Sbjct:   48 DEGKQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLTGKYGEDSKLIYDLKDQGGELLSLRYDLTVP 134          

HSP 2 Score: 26.9498 bits (58), Expect = 3.691e-30
Identity = 13/22 (59.09%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  264 YDMT*LFPFARYVDMNGLTSFK 329
            YD+T   PFARY+ MN LT+ K
Sbjct:  129 YDLT--VPFARYLAMNKLTNIK 148          
BLAST of EY750497 vs. ExPASy Swiss-Prot
Match: SYHC_BOVIN (Histidyl-tRNA synthetase, cytoplasmic OS=Bos taurus GN=HARS PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 4.806e-30
Identity = 60/87 (68.97%), Postives = 69/87 (79.31%), Query Frame = 2
Query:   26 DTNESRRLPKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVP 286
            D  + + + K PKGTRD++  QMAVREK F +I   FKRHGA  +DTPVFE++ETL GKYGEDSKLIYDL DQGGEL SLRYDLTVP
Sbjct:   48 DEGKPKFVLKTPKGTRDYSPRQMAVREKVFDVIISCFKRHGAEVIDTPVFELKETLTGKYGEDSKLIYDLKDQGGELLSLRYDLTVP 134          

HSP 2 Score: 26.9498 bits (58), Expect = 4.806e-30
Identity = 13/22 (59.09%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  264 YDMT*LFPFARYVDMNGLTSFK 329
            YD+T   PFARY+ MN LT+ K
Sbjct:  129 YDLT--VPFARYLAMNKLTNIK 148          
BLAST of EY750497 vs. ExPASy Swiss-Prot
Match: SYHC_MESAU (Histidyl-tRNA synthetase, cytoplasmic OS=Mesocricetus auratus GN=HARS PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.342e-29
Identity = 59/87 (67.82%), Postives = 70/87 (80.46%), Query Frame = 2
Query:   26 DTNESRRLPKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVP 286
            D ++ + + K PKGTRD++  QMAVREK F +I   FKRHGA  +DTPVFE++ETLMGKYG+D KLIYDL DQGGEL SLRYDLTVP
Sbjct:   48 DESKQKFVLKTPKGTRDYSPRQMAVREKVFDVIICCFKRHGAEVIDTPVFELKETLMGKYGQDCKLIYDLKDQGGELLSLRYDLTVP 134          

HSP 2 Score: 26.1794 bits (56), Expect = 2.342e-29
Identity = 12/22 (54.55%), Postives = 15/22 (68.18%), Query Frame = 3
Query:  264 YDMT*LFPFARYVDMNGLTSFK 329
            YD+T   PF RY+ MN LT+ K
Sbjct:  129 YDLT--VPFGRYLAMNNLTNIK 148          
BLAST of EY750497 vs. ExPASy Swiss-Prot
Match: SYHC_DICDI (Histidyl-tRNA synthetase, cytoplasmic OS=Dictyostelium discoideum GN=hisS PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.172e-29
Identity = 55/78 (70.51%), Postives = 66/78 (84.62%), Query Frame = 2
Query:   53 KLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVP 286
            K PKGT+D+   QM +RE+ F  I +VFKRHGA+ ++TPVFE++ETL GKYGEDSKLIYDL DQGGE+CSLRYDLTVP
Sbjct:   40 KTPKGTQDYNPRQMTIREQVFDGIKQVFKRHGAVTIETPVFELKETLTGKYGEDSKLIYDLQDQGGEICSLRYDLTVP 117          

HSP 2 Score: 27.7202 bits (60), Expect = 5.172e-29
Identity = 13/22 (59.09%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  264 YDMT*LFPFARYVDMNGLTSFK 329
            YD+T   PFARYV MNG+ + K
Sbjct:  112 YDLT--VPFARYVAMNGVLNIK 131          
BLAST of EY750497 vs. ExPASy Swiss-Prot
Match: SYHC_TAKRU (Histidyl-tRNA synthetase, cytoplasmic OS=Takifugu rubripes GN=hars PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 6.726e-29
Identity = 59/88 (67.05%), Postives = 69/88 (78.41%), Query Frame = 2
Query:   23 GDTNESRRLPKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVP 286
            GD  + + + K  KGTRD+  +QMA+REK F+ I   FKRHGA  +DTPVFE++ETL GKYGEDSKLIYDL DQGGEL SLRYDLTVP
Sbjct:   52 GDDGKHQFVLKTAKGTRDYNPKQMAIREKVFNTIVSCFKRHGAETIDTPVFELKETLTGKYGEDSKLIYDLKDQGGELLSLRYDLTVP 139          

HSP 2 Score: 26.1794 bits (56), Expect = 6.726e-29
Identity = 12/22 (54.55%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  264 YDMT*LFPFARYVDMNGLTSFK 329
            YD+T   PFARY+ MN +T+ K
Sbjct:  134 YDLT--VPFARYLAMNKITNIK 153          
BLAST of EY750497 vs. ExPASy Swiss-Prot
Match: SYH_YEAST (Histidyl-tRNA synthetase, mitochondrial OS=Saccharomyces cerevisiae GN=HTS1 PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 2.073e-27
Identity = 53/78 (67.95%), Postives = 64/78 (82.05%), Query Frame = 2
Query:   53 KLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVP 286
            K PKGT+D+A   M +RE  FS ++ +FK+HG + +DTPVFE+RE L GKYGEDSKLIY+L DQGGELCSLRYDLTVP
Sbjct:   56 KTPKGTKDWADSDMVIREAIFSTLSGLFKKHGGVTIDTPVFELREILAGKYGEDSKLIYNLEDQGGELCSLRYDLTVP 133          

HSP 2 Score: 26.9498 bits (58), Expect = 2.073e-27
Identity = 13/22 (59.09%), Postives = 15/22 (68.18%), Query Frame = 3
Query:  264 YDMT*LFPFARYVDMNGLTSFK 329
            YD+T   PFARYV MN + S K
Sbjct:  128 YDLT--VPFARYVAMNNIQSIK 147          
BLAST of EY750497 vs. ExPASy Swiss-Prot
Match: SYH_SCHPO (Histidyl-tRNA synthetase OS=Schizosaccharomyces pombe GN=hts1 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.972e-27
Identity = 55/78 (70.51%), Postives = 65/78 (83.33%), Query Frame = 2
Query:   53 KLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVP 286
            K PKGT+D+  + + +RE  FS +TE+FKRHG + LDTPVFE++E L GKYGEDSKLIYDL DQGGELCSLRYDLTVP
Sbjct:   64 KTPKGTKDWCDKDVVLREHIFSTVTEIFKRHGGVTLDTPVFELKEILSGKYGEDSKLIYDLKDQGGELCSLRYDLTVP 141          
The following BLAST results are available for this feature:
BLAST of EY750497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
SYH_ORYSJ1.714e-4087.36Histidyl-tRNA synthetase OS=Oryza sativa subsp. ja... [more]
SYHC_PONAB5.816e-3170.11Histidyl-tRNA synthetase, cytoplasmic OS=Pongo abe... [more]
SYHC_HUMAN5.816e-3170.11Histidyl-tRNA synthetase, cytoplasmic OS=Homo sapi... [more]
SYHC_MOUSE3.691e-3068.97Histidyl-tRNA synthetase, cytoplasmic OS=Mus muscu... [more]
SYHC_BOVIN4.806e-3068.97Histidyl-tRNA synthetase, cytoplasmic OS=Bos tauru... [more]
SYHC_MESAU2.342e-2967.82Histidyl-tRNA synthetase, cytoplasmic OS=Mesocrice... [more]
SYHC_DICDI5.172e-2970.51Histidyl-tRNA synthetase, cytoplasmic OS=Dictyoste... [more]
SYHC_TAKRU6.726e-2967.05Histidyl-tRNA synthetase, cytoplasmic OS=Takifugu ... [more]
SYH_YEAST2.073e-2767.95Histidyl-tRNA synthetase, mitochondrial OS=Sacchar... [more]
SYH_SCHPO4.972e-2770.51Histidyl-tRNA synthetase OS=Schizosaccharomyces po... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-095-G10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY750497 ID=EY750497; Name=EY750497; organism=Citrus sinensis; type=EST; length=984bp
CCACGCGTCCGCGGACGCGTGGGGGGACACTAATGAAAGTAGAAGGCTTC
CTAAGCTGCCTAAGGGTACTCGTGATTTTGCAAAAGAACAAATGGCAGTA
AGAGAAAAAGCATTCTCGATTATAACTGAGGTTTTCAAGAGGCATGGTGC
CATGGCCCTAGATACTCCTGTATTCGAAATGAGAGAGACCTTAATGGGAA
AATATGGAGAAGACTCAAAGTTGATTTATGATCTCGCTGACCAGGGCGGA
GAGCTTTGTTCTCTACGATATGACTTAACTGTTCCCATTTGCTCGGTATG
TGGATATGAATGGCCTTACATCATTTAAAACACAACAAAAAACTAACGAG
CACACAACCAGACATCCCACCCACCGCAACACTCGGAAAACCTGTAGGTG
GGCCCGCCACTTAGCTGCGGCATGATCGACCGCAGCACACAACCTCCCCA
CCCCCGCCAATCACACAGCACGCGGCCACGCCGGCGCCGCAGCCACAGAC
CGACGACGACCAGACCAAGCAGCGGCCAGGCCAGAAATAAGCGGAACGAG
CGAAAAGAGCCGCAACAGACAAGAGCCAAGTGAGCAGCGACCCCAGCAAC
AACCACCCAGCCCTCGCCAACTCACCACCCTCGCGCCCGAAGCAGAAACG
CGAGAACCCCCCACCGCCCGACCAGGGCGACGCCCACGAAGAACACCCAG
ACCAAGCAACCCCGCCGAGTCCAACCGCGAACAACCCCCGCGCGGCGAAC
ACCCAAAACAACAAGGACAAAACGCACACACCAAAACAACCACAGACAAA
CCGCACCCCAGCCAACCCCAACCCGAACACCGCCGAACAGAACACCAAGC
AACCACCCACCACCGAGACCAGCGCACACACGGCACGCACGAGAGACCCC
ACTAAAGACGCCCCAGAGAACGCGCGAACAACCACACCAGCACAAAGGAG
ACGGGAAACGAAACGACGGCACCGCAAAAAAACG
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