EY718855

Overview
NameEY718855
Unique NameEY718855
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY718855 vs. ExPASy Swiss-Prot
Match: PLSP1_ARATH (Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1 PE=2 SV=2)

HSP 1 Score: 323.939 bits (829), Expect = 7.581e-88
Identity = 152/187 (81.28%), Postives = 165/187 (88.24%), Query Frame = 1
Query:   37 PGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIXRSVFRYWPPQRIGSTVPEGGCAVDSQ 597
            P WL+ TSDDA+TV  A+ +SLAFR F+AEPRYIPSLSMYPTFDVGDR+VAEKV+YYFRKPC+NDIVIFKSPPVLQEVGYTD DVFIKR+VAKEGD+VEV  GKL+VNGV RNE +ILE P Y MTPI VPENSVFVMGDNRNNSYDSHVWGPLP KNII RSVFRYWPP R+  TV EGGCAVD Q
Sbjct:  105 PEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILEPPGYEMTPIRVPENSVFVMGDNRNNSYDSHVWGPLPLKNIIGRSVFRYWPPNRVSGTVLEGGCAVDKQ 291          
BLAST of EY718855 vs. ExPASy Swiss-Prot
Match: TPP1_ARATH (Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana GN=TPP1 PE=2 SV=2)

HSP 1 Score: 231.106 bits (588), Expect = 6.687e-60
Identity = 108/183 (59.02%), Postives = 140/183 (76.50%), Query Frame = 1
Query:   40 GWLN----ITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVL---QEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIXRSVFRYWPPQRIGSTV 567
            GW+N    + S+DAK    A+ +S+ FRS +AEP+ IPS SMYPT D GDR++AEKV+Y+FRKP  +DIVIFK+PP+L    E GY+ +DVFIKR+VA EGD VEVR+GKL VN +V+ ED++LE  SY M P+ VP+  VFV+GDNRN S+DSH WGPLP +NI+ RSVFRYWPP ++  T+
Sbjct:  144 GWVNKLLSVCSEDAKAAFTAVTVSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAPPILLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEEDFVLEPMSYEMEPMFVPKGYVFVLGDNRNKSFDSHNWGPLPIENIVGRSVFRYWPPSKVSDTI 326          
BLAST of EY718855 vs. ExPASy Swiss-Prot
Match: TPP2_ARATH (Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thaliana GN=TPP2 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 1.141e-59
Identity = 111/180 (61.67%), Postives = 136/180 (75.56%), Query Frame = 1
Query:   40 GW----LNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIXRSVFRYWPPQRIGSTV 567
            GW    LNI S+DAK    A+ +SL FRS +AEP+ IPS SM PT DVGDR++AEKV+Y+FRKP  +DIVIFK+PP+L E GY+  DVFIKR+VA EGD VEV +GKL+VN  V+ ED++LE   Y M P+ VPE  VFV+GDNRN S+DSH WGPLP KNII RSVFRYWPP ++   +
Sbjct:  174 GWVNKLLNICSEDAKAAFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDRVIAEKVSYFFRKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDFVLEPIDYEMEPMFVPEGYVFVLGDNRNKSFDSHNWGPLPIKNIIGRSVFRYWPPSKVSDII 353          
BLAST of EY718855 vs. ExPASy Swiss-Prot
Match: LEP1_SYNY3 (Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803) GN=lepB1 PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.553e-43
Identity = 87/180 (48.33%), Postives = 116/180 (64.44%), Query Frame = 1
Query:   19 VRSGALPGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIXRSVFRYWPPQRIG 558
            +++  +P       ++   ++ ALV++L  R FVAEPRYIPS SM PT + GDR+V EKV+Y+F  P   DI++F  P +LQ  GY     FIKRV+A  G  VEV  G +  +G    E+YILE P YN+  + VP+  VFVMGDNRNNS DSHVWG LP +NII  ++FR++P  R G
Sbjct:    1 MQNSPIPSPWQFIKENIPLLMVALVLALLLRFFVAEPRYIPSDSMLPTLEQGDRLVVEKVSYHFHPPQVGDIIVFHPPELLQVQGYDLGQAFIKRVIALPGQTVEVNNGIVYRDGQPLQEEYILEPPQYNLPAVRVPDGQVFVMGDNRNNSNDSHVWGFLPQQNIIGHALFRFFPASRWG 180          
BLAST of EY718855 vs. ExPASy Swiss-Prot
Match: LEP_PHOLA (Signal peptidase I OS=Phormidium laminosum GN=lepB PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.450e-40
Identity = 79/190 (41.58%), Postives = 118/190 (62.11%), Query Frame = 1
Query:    1 PRVRPRVRSGALPGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIXRSVFRYWPPQRIGSTVP 570
            P+  P   + + P   +   +  KT+  ++V++L  R+FVAE RYIPS SM PT +V DR++ EK++Y+F  P   DI++F     L++   + ++ FIKRV+   G+ V+V  G++++NG    E+YI   P Y   P  VP +S  V+GDNRNNSYDSH WG +P +NII R+V R+WP  R+G   P
Sbjct:   10 PQTPPAQPAASQPKADSPLMEGIKTIGLSVVLALGIRTFVAEARYIPSESMLPTLEVNDRLIVEKISYHFNPPRRGDIIVFHPTEALKQQNPSLNEAFIKRVIGLPGETVQVTGGRVLINGQPLEENYIQSPPDYQWGPEKVPADSFLVLGDNRNNSYDSHFWGYVPRQNIIGRAVVRFWPVNRLGELGP 199          
BLAST of EY718855 vs. ExPASy Swiss-Prot
Match: LEP2_SYNY3 (Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803) GN=lepB2 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.227e-37
Identity = 76/195 (38.97%), Postives = 116/195 (59.49%), Query Frame = 1
Query:   43 WLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIXRSVFRYWPPQRIGSTVPEG---GCAVDSQLKTSPAL 618
            WL +     KT++ A+++++  R+FVAE RYIPS SM PT  + DR++ EK++Y  R P   +IV+F     L+   +   D FIKR++   GD V V +G + VNG + +E+YI   P+Y   P+ VP++   V+GDNRNNSYDSH WG +P + ++ R+  R+WP  R+G    +       +  Q   SPA+
Sbjct:   21 WLEL----GKTMVTAVILAIGIRTFVAEARYIPSSSMEPTLQINDRLIIEKISYRLRDPERGEIVVFNPTDALKAKNF--HDAFIKRIIGLPGDEVRVSQGNVYVNGKMLDENYIAAPPAYEYGPVKVPDDQYLVLGDNRNNSYDSHYWGFVPREKLLGRAFVRFWPVPRVGLLTDDAEREAVEISPQAWESPAI 209          
BLAST of EY718855 vs. ExPASy Swiss-Prot
Match: LEP_MYCTU (Probable signal peptidase I OS=Mycobacterium tuberculosis GN=lepB PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.080e-17
Identity = 69/215 (32.09%), Postives = 97/215 (45.12%), Query Frame = 1
Query:   67 AKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFD-----VGDRIVAEKVTYYFRKPCSNDIVIFKSPP---------------------VLQEVGYT--DDDVFIKRVVAKEGDVVEVR-EGKLIVNGVVRNEDYI-----LEAPSY------NMTPITVPENSVFVMGDNRNNSYDSHVWGPL-----------PAKNIIXRSVFRYWPPQRIG 558
            A   + A+V+     +FVA P  IPS SM PT       VGDRI+ +K++Y F  P   D+++F+ PP                      L  +G+   D++  +KRV+A  G  V+ R +  L VNG    E Y+     +  PS          P+TVP   V+VMGDNR +S DS    PL           P  N+I ++    WPP R G
Sbjct:   69 AVLAVIAVVLYYVMLTFVARPYLIPSESMEPTLHGCSTCVGDRIMVDKLSYRFGSPQPGDVIVFRGPPSWNVGYKSIRSHNVAVRWVQNALSFIGFVPPDENDLVKRVIAVGGQTVQCRSDTGLTVNGRPLKEPYLDPATMMADPSIYPCLGSEFGPVTVPPGRVWVMGDNRTHSADSRAHCPLLCTDDPLPGTVPVANVIGKARLIVWPPSRWG 283          
BLAST of EY718855 vs. ExPASy Swiss-Prot
Match: LEP_MYCLE (Probable signal peptidase I OS=Mycobacterium leprae GN=lepB PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.104e-17
Identity = 69/221 (31.22%), Postives = 96/221 (43.44%), Query Frame = 1
Query:   76 VLAALVISLAF--RSFVAEPRYIPSLSMYPTFD-----VGDRIVAEKVTYYFRKPCSNDIVIFKSPP---------------------VLQEVGYT--DDDVFIKRVVAKEGDVVEVR-EGKLIVNGVVRNEDYILEAP-----------SYNMTPITVPENSVFVMGDNRNNSYDSHVW------------------GPLPAKNIIXRSVFRYWPPQRIG 558
            +LA + I L +   +FVA P  IPS SM PT       VGDRI+ +K+TY F  P   D+++FK PP                      L  VG+   D++  +KRV+A  G  V+ R +  L VNG    E Y+                    P+TVP+  ++VMGDNR +S DS                     G +P  N+I ++    WPP R G
Sbjct:   58 ILAVIAIGLYYVMLTFVARPYLIPSESMEPTLHGCSGCVGDRIMVDKITYRFSSPQPGDVIVFKGPPSWNTMYKSIRSNNIVLRSVQNALSFVGFVPPDENDLVKRVIAVGGQTVQCRSDTGLTVNGKPLKEPYLRPVTMNADLSFSPCLGSEFGPVTVPQGRLWVMGDNRIHSADSRYHCNSTDVVNGLSCTGDPNSGTVPVSNVIGKARVVVWPPSRWG 278          
BLAST of EY718855 vs. ExPASy Swiss-Prot
Match: LEPS_BACSU (Signal peptidase I S OS=Bacillus subtilis GN=sipS PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.017e-15
Identity = 52/171 (30.41%), Postives = 82/171 (47.95%), Query Frame = 1
Query:   67 AKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYI-----------LEAPSYNMTPITVPENSVFVMGDNRNNSYDS-HVWGPLPAKNIIXRSVFRYWP 543
            AK ++ A+V++L  R+F+  P  +   SMYPT    +R+       Y  +    DIV+             DD  ++KR++   GD VE++  +L +NG   +E Y+            +  + +  P+ VP+N  FVMGDNR NS DS +  G    K I   S F ++P
Sbjct:   16 AKAIVIAVVLALLIRNFIFAPYVVDGDSMYPTLHNRERVFVNMTVKYIGEFDRGDIVVLNG----------DDVHYVKRIIGLPGDTVEMKNDQLYINGKKVDEPYLAANKKRAKQDGFDHLTDDFGPVKVPDNKYFVMGDNRRNSMDSRNGLGLFTKKQIAGTSKFVFYP 176          
BLAST of EY718855 vs. ExPASy Swiss-Prot
Match: LEP2_BACAM (Signal peptidase I OS=Bacillus amyloliquefaciens GN=sipS2 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.558e-15
Identity = 56/169 (33.14%), Postives = 83/169 (49.11%), Query Frame = 1
Query:   70 KTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYI------LEAPSYNMT----PITVPENSVFVMGDNRNNSYDSHVWGPLPAKN-IIXRSVFRYWP 543
            K ++ A+ ++L  R F+ EP  +   SMYPT   G+R+   K   Y  +    DIVI          G T    ++KR++ K G+ VE++   L +NG    E Y+       +    N+T    P+ VP+   FVMGDNR NS DS     L A+N I+  S F ++P
Sbjct:   25 KAIIIAVALALLIRHFLFEPYLVEGSSMYPTLHDGERLFVNKSVNYIGEIERGDIVIIN--------GDTSKVHYVKRLIGKPGETVEMKNDTLYINGKKIAEPYLASNKKEAKKLGVNLTGDFGPVKVPKGKYFVMGDNRLNSMDSRNGLGLIAENRIVGTSKFVFFP 185          
The following BLAST results are available for this feature:
BLAST of EY718855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
PLSP1_ARATH7.581e-8881.28Chloroplast processing peptidase OS=Arabidopsis th... [more]
TPP1_ARATH6.687e-6059.02Thylakoidal processing peptidase 1, chloroplastic ... [more]
TPP2_ARATH1.141e-5961.67Probable thylakoidal processing peptidase 2, chlor... [more]
LEP1_SYNY32.553e-4348.33Probable signal peptidase I-1 OS=Synechocystis sp.... [more]
LEP_PHOLA3.450e-4041.58Signal peptidase I OS=Phormidium laminosum GN=lepB... [more]
LEP2_SYNY31.227e-3738.97Probable signal peptidase I-2 OS=Synechocystis sp.... [more]
LEP_MYCTU1.080e-1732.09Probable signal peptidase I OS=Mycobacterium tuber... [more]
LEP_MYCLE4.104e-1731.22Probable signal peptidase I OS=Mycobacterium lepra... [more]
LEPS_BACSU5.017e-1530.41Signal peptidase I S OS=Bacillus subtilis GN=sipS ... [more]
LEP2_BACAM8.558e-1533.14Signal peptidase I OS=Bacillus amyloliquefaciens G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-095-A12-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY718855 ID=EY718855; Name=EY718855; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGCCCACGCGTCCGAAGTGGGGCATTGCCAGGATGGTTGAA
TATCACTTCTGATGATGCAAAAACAGTTTTGGCGGCGCTGGTTATTTCAC
TTGCTTTTCGGTCGTTTGTGGCCGAGCCAAGGTACATTCCTTCGTTGTCG
ATGTATCCTACGTTTGATGTTGGAGATCGAATTGTTGCAGAAAAGGTTAC
CTACTATTTCAGAAAGCCATGCTCAAATGATATAGTAATTTTCAAAAGTC
CACCGGTTCTTCAGGAAGTAGGATACACTGATGATGATGTCTTTATTAAA
CGAGTTGTTGCCAAGGAAGGCGATGTTGTAGAGGTTCGTGAAGGGAAACT
TATAGTTAATGGAGTTGTAAGAAATGAAGACTATATCTTGGAGGCCCCTT
CTTATAACATGACACCAATTACTGTACCGGAGAACTCGGTCTTTGTTATG
GGTGATAATCGAAATAACAGTTATGATTCGCATGTATGGGGGCCCCTCCC
TGCCAAGAATATCATANGAAGATCAGTATTTCGCTATTGGCCTCCGCAAA
GGATTGGTAGTACAGTTCCTGAAGGTGGCTGTGCTGTTGACAGCCAGTTA
AAGACCAGTCCTGCACTTCCAAACTGAGTGTAGTGGTAACCTTAATTTTT
TGCTCCTCCAGAAATTCTATTGCTCAGCTACAATCCATTCTTCAAGGGAT
GCCCTTTCCTTTTTTTGACGGGATCCCCACACTTGGAATCTAAATTAACT
GGTAAATCGACCCGCACATTCCCAGAATCCAACAGAAATTGGGAAAGGTG
CGCTTCCCTGGTCCGATTGGTTATGAAATGCAACACTTTTTGCAACACAC
CCCACACAACGGAGANAAGAGAGGAGCAAGCGGGCGCGGGCCGGGAAAGA
C
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