EY749745

Overview
NameEY749745
Unique NameEY749745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1010
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY749745 vs. ExPASy Swiss-Prot
Match: TIF3B_ARATH (Protein TIFY 3B OS=Arabidopsis thaliana GN=TIFY3B PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.254e-22
Identity = 57/112 (50.89%), Postives = 77/112 (68.75%), Query Frame = 3 
Query:   15 FDAIPADKVLEIMLIAASSATVTNTSDMKTDNTNCPASSPVLTRSPSLQSTASALASPRAQSYPVQRNLLCKLQAELPMARRHSLQRFFEKRRDRLVSKNPYPVQSEAKASD 350
            FD +P++KV EI+ IAA +    N++ +       P SSP L R+PS  ST++ +ASP AQ +P+Q    C+  A+LP+ARRHSLQRF EKRRDRLV+KNPYP  S+ K +D
Sbjct:   69 FDGLPSEKVQEILRIAAKAMETKNSTSIS------PVSSPALNRAPSFSSTSN-VASPAAQPFPIQPISFCRSTADLPIARRHSLQRFLEKRRDRLVNKNPYPT-SDFKKTD 172
The following BLAST results are available for this feature:
BLAST of EY749745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TIF3B_ARATH2.254e-2250.89Protein TIFY 3B OS=Arabidopsis thaliana GN=TIFY3B ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-079-D09-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY749745 ID=EY749745; Name=EY749745; organism=Citrus sinensis; type=EST; length=1010bp
CTTTACACGTCCGATTTGATGCAATTCCGGCAGACAAGGTCCTTGAAATT
ATGCTTATTGCTGCCTCTTCTGCCACTGTTACTAACACAAGTGACATGAA
GACGGACAATACCAACTGTCCTGCCTCTTCACCAGTTCTAACAAGGTCTC
CTTCACTGCAAAGCACTGCAAGTGCTTTGGCATCACCTCGGGCACAATCA
TATCCTGTTCAAAGGAATCTCCTCTGTAAATTGCAAGCTGAACTACCAAT
GGCAAGGAGGCATTCCCTTCAGCGATTTTTCGAGAAGCGACGTGACAGGC
TGGTGAGCAAGAATCCATATCCTGTTCAATCAGAGGCAAAAGCTTCTGAC
ACCAAAGCTCAGACTCCTGCAGAGGCAGGTTGCTTTGAAAAAACTTCCGT
GCCTCAGGAAGAATTGCAACCCTAGGCTGCAGCCAATGTTGCCATAAATT
ATCTATCTTTGCTTAAAAGTTTGTAATAAATAAATCCAAAACTATCTACT
TAAAATAACTAGACATTGCTGTATTGTTTGTGTGAAAAAACCCCAGCGCA
CAGGGGGGTGATGATGTTTCAAATTGGTTTAGAAAATTTGTAAGAAATGC
CATGTGTAAAAACTTCTCATTGGCGGGGAACAAAAAAAAAAGAAAAAAAT
TTCTTGATGGTAGGGGCTTTCCCCCCTGGGATTGGATCCTTTTTATTAGC
CCAAAAAAAATTAATTTCACATTTTTTTATTTCTCACACTCACAAAAAAA
TATTGAAAAAGTGCGGTTCTAAAATGGGGCACAATAGATTTTATGTGAAT
TTAAAAATTTTAGGGGAAAAAAAAAAACACCCCCAACAAAAAAACAACAA
CATAATTCTGGTATCTTTTTACAAAAAAAAAAAAAAAAAAAAAAAAATGG
GGGCGCGCCCCGTCCCAATATAGAAAGTAACAATCAAAAATACAATCACA
AAAGACCACGTGCTGAACAATTGTTGGTCGACCTGAGAAGAAAAAATAAC
AACATTTTCT
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