FC922945

Overview
NameFC922945
Unique NameFC922945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length547
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922945 vs. ExPASy Swiss-Prot
Match: ARA1_ARATH (Ras-related protein ARA-1 OS=Arabidopsis thaliana GN=ARA-1 PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.272e-59
Identity = 112/133 (84.21%), Postives = 123/133 (92.48%), Query Frame = 1
Query:  148 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRSAVGTLIVYDITKRTTFDSISRWLDELKTHSDTTVPRMLVGNKCDLESIPNVSTEKSKSL 546
            YLFKIV+IGDSAVGKSNLLSRYARNEF+ +SKATIGVEFQTQSMEI+GKEVKAQIWDTAGQERFRAVTSAYYR AVG L+VYDIT+RTTF+S+ RWLDELK HSDTTV RMLVGNKCDLE+I  VS E+ K+L
Sbjct:   11 YLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEEGKAL 143          
BLAST of FC922945 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 5.061e-59
Identity = 111/133 (83.46%), Postives = 122/133 (91.73%), Query Frame = 1
Query:  148 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRSAVGTLIVYDITKRTTFDSISRWLDELKTHSDTTVPRMLVGNKCDLESIPNVSTEKSKSL 546
            YLFKIVIIGDSAVGKSNLL+RYARNEFNP+SKATIGVEFQTQSM IDGKEVKAQIWDTAGQERFRAVTSAYYR AVG L+VYDIT+ +TF+++ RWLDEL THSDTTV +ML+GNKCDLESI  VS E+ KSL
Sbjct:   11 YLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSL 143          
BLAST of FC922945 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 9.899e-47
Identity = 87/132 (65.91%), Postives = 108/132 (81.82%), Query Frame = 1
Query:  148 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRSAVGTLIVYDITKRTTFDSISRWLDELKTHSDTTVPRMLVGNKCDLESIPNVSTEKSKS 543
            YLFK+V+IGDS VGKSNLLSR+ +NEFN  SK+TIGVEF T+++++DGK VKAQIWDTAGQER+RA+TSAYYR AVG L+VYD+T+R TF+++ RWL ELK H+D  +  MLVGNK DL  +  V TE  KS
Sbjct:   12 YLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKS 143          
BLAST of FC922945 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.293e-46
Identity = 87/132 (65.91%), Postives = 107/132 (81.06%), Query Frame = 1
Query:  148 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRSAVGTLIVYDITKRTTFDSISRWLDELKTHSDTTVPRMLVGNKCDLESIPNVSTEKSKS 543
            YLFK+V+IGDS VGKSNLLSR+ RNEFN  SK+TIGVEF T+S+ IDGK +KAQIWDTAGQER+RA+TSAYYR AVG L+VYD+T+ TTF++  RWL EL+ H+D  +  ML+GNK DL  +  VSTE  K+
Sbjct:   12 YLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVSTEDGKA 143          
BLAST of FC922945 vs. ExPASy Swiss-Prot
Match: YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 2.880e-46
Identity = 85/132 (64.39%), Postives = 111/132 (84.09%), Query Frame = 1
Query:  148 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRSAVGTLIVYDITKRTTFDSISRWLDELKTHSDTTVPRMLVGNKCDLESIPNVSTEKSKS 543
            YLFK+V+IGDS VGKSNLLSR+ RNEF+  SK+TIGVEF T+S+++DGK +KAQIWDTAGQER+RA+TSAYYR AVG L+VYDITK  TF+++ RWL EL+ H+D+ +  MLVGNK DL+ + +V TE +++
Sbjct:   11 YLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDLKHLRDVQTEVAQA 142          
BLAST of FC922945 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 4.913e-46
Identity = 87/131 (66.41%), Postives = 110/131 (83.97%), Query Frame = 1
Query:  148 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRSAVGTLIVYDITKRTTFDSISRWLDELKTHSDTTVPRMLVGNKCDLESIPNVSTEKSK 540
            Y+FK+V+IGDSAVGKS LL+R+ARNEFN  SKATIGVEFQT+++ ID + VKAQIWDTAGQER+RAVTSAYYR AVG ++VYDITKR +FD ++RWL+EL+ H+D  +  ML+GNK DL ++  V TE +K
Sbjct:   17 YVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAK 147          
BLAST of FC922945 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 4.913e-46
Identity = 87/132 (65.91%), Postives = 108/132 (81.82%), Query Frame = 1
Query:  148 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRSAVGTLIVYDITKRTTFDSISRWLDELKTHSDTTVPRMLVGNKCDLESIPNVSTEKSKS 543
            YLFK+V+IGDS VGKSNLLSR++RNEFN  SK+TIGVEF T+S+ +D K VKAQIWDTAGQER+RA+TSAYYR AVG L+VYDIT+  TF+++ RWL EL+ H+D  +  MLVGNK DL  +  VSTE +K+
Sbjct:   13 YLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKA 144          
BLAST of FC922945 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 6.416e-46
Identity = 87/131 (66.41%), Postives = 110/131 (83.97%), Query Frame = 1
Query:  148 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRSAVGTLIVYDITKRTTFDSISRWLDELKTHSDTTVPRMLVGNKCDLESIPNVSTEKSK 540
            Y+FK+V+IGDSAVGKS +L+R+ARNEF+  SK+TIGVEFQT+++ ID K VKAQIWDTAGQER+RAVTSAYYR AVG ++VYDITKR TFD I RWL+EL+ H+D  +  +L+GNKCDL +  +V TE +K
Sbjct:   16 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAK 146          
BLAST of FC922945 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 8.380e-46
Identity = 84/132 (63.64%), Postives = 109/132 (82.58%), Query Frame = 1
Query:  148 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRSAVGTLIVYDITKRTTFDSISRWLDELKTHSDTTVPRMLVGNKCDLESIPNVSTEKSKS 543
            YLFK+V+IGDS VGKSNLLSR+ RNEF+  SK+TIGVEF T+S+++DGK VKAQIWDTAGQER+RA+TSAYYR AVG L+VYD+T+ +TF+++ RWL EL+ H+D  +  MLVGNK DL  +  V T++ K+
Sbjct:   13 YLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKA 144          
BLAST of FC922945 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.867e-45
Identity = 83/133 (62.41%), Postives = 109/133 (81.95%), Query Frame = 1
Query:  148 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRSAVGTLIVYDITKRTTFDSISRWLDELKTHSDTTVPRMLVGNKCDLESIPNVSTEKSKSL 546
            YLFK+V+IGDS VGKSNLLSR+ +NEFN  SK+TIGVEF T+S+ ID K +KAQIWDTAGQER+RA+TSAYYR AVG L+VYD+T+  T+++++RWL EL+ H+D  +  ML+GNK DL  +  VST+++K L
Sbjct:   12 YLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTDEAKGL 144          
The following BLAST results are available for this feature:
BLAST of FC922945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARA1_ARATH2.272e-5984.21Ras-related protein ARA-1 OS=Arabidopsis thaliana ... [more]
ARA4_ARATH5.061e-5983.46Ras-related protein ARA-4 OS=Arabidopsis thaliana ... [more]
RAA1B_ARATH9.899e-4765.91Ras-related protein RABA1b OS=Arabidopsis thaliana... [more]
RB11E_LOTJA1.293e-4665.91Ras-related protein Rab11E OS=Lotus japonicus GN=R... [more]
YPTC6_CHLRE2.880e-4664.39Ras-related protein YPTC6 OS=Chlamydomonas reinhar... [more]
RGP1_ORYSJ4.913e-4666.41Ras-related protein RGP1 OS=Oryza sativa subsp. ja... [more]
RB11B_TOBAC4.913e-4665.91Ras-related protein Rab11B OS=Nicotiana tabacum GN... [more]
RB11A_LOTJA6.416e-4666.41Ras-related protein Rab11A OS=Lotus japonicus GN=R... [more]
RIC2_ORYSJ8.380e-4663.64Ras-related protein RIC2 OS=Oryza sativa subsp. ja... [more]
YPT3_NICPL1.867e-4562.41Ras-related protein YPT3 OS=Nicotiana plumbaginifo... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1CC06RM1 SLH Citrus sinensis cDNA clone KN0AAM1CC06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922945 ID=FC922945; Name=FC922945; organism=Citrus sinensis; type=EST; length=547bp
TGACACCAGTCGCAGCACCACCACCATTATTGTTATTTATTTATTTTTTT
TATTTTTTTTCCTTTTAGCTTCCACTTTCCATTCAAGGGAATTCAATTCA
AAACGATGTCGTCGTCGGATGAAGAAGGAGGAGGAGGAGGGGAGGAGTAC
TTGTTCAAGATCGTGATAATCGGCGACTCGGCGGTGGGGAAATCGAACCT
ACTGTCTCGTTACGCTCGGAACGAGTTCAATCCTCACTCGAAGGCGACAA
TTGGAGTCGAGTTTCAAACGCAGAGCATGGAGATCGACGGCAAGGAAGTC
AAGGCTCAGATTTGGGACACCGCCGGCCAGGAGCGCTTCCGCGCCGTCAC
TTCTGCTTACTACAGAAGCGCCGTCGGTACTCTCATTGTTTACGACATTA
CCAAGCGTACCACTTTTGACAGCATCTCTCGCTGGCTCGATGAGCTCAAG
ACTCATTCTGATACCACTGTGCCAAGGATGCTGGTCGGGAACAAATGTGA
TTTGGAGAGTATCCCGAATGTGAGCACTGAAAAAAGCAAAAGCCTTG
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