EY749273

Overview
NameEY749273
Unique NameEY749273
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length964
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY749273 vs. ExPASy Swiss-Prot
Match: SC24C_ARATH (Protein transport protein Sec24-like CEF OS=Arabidopsis thaliana GN=CEF PE=1 SV=2)

HSP 1 Score: 319.316 bits (817), Expect = 2.051e-86
Identity = 166/238 (69.75%), Postives = 185/238 (77.73%), Query Frame = 3
Query:    6 TRPQVYYYYPFSALSDPAKLYNDLRWNITRPQGFEAVMRVRCSQGIQVQEYHGNFCKRIPTDIDLPAIDCNKAIMVTLKHDDKLQDGSECAFQCALLYTTVYGQRRIRVTTLSLPCTSNLSNLYRSADLDTQFTCFMKQAASEIPSTPLANVREQMMNLCVNALVSYRKFCATVSSSGQLILPEALKLFALCTPLH*LKSTGL--------RN*WQNK*SNLFGKLYVSFCFYSLFAV 695
            T  QVY YYPFSALSDP KLYNDLRWNITRPQGFEAVMRVRCSQGIQVQEY GNFCKRIPTDIDLPAIDC+KAIMVTLKHDDKLQDG+EC FQCALLYTT+ G+RRIRV  LS+PCT+ LSNL+RSADLD+QF C +KQAA+EIPS  L  V+EQ  N C+  L SYRKFCATV+S+GQLILPEALKL  L T L   K  GL        R+ W N  S+L   L +   +  + AV
Sbjct:  719 TGGQVYCYYPFSALSDPPKLYNDLRWNITRPQGFEAVMRVRCSQGIQVQEYSGNFCKRIPTDIDLPAIDCDKAIMVTLKHDDKLQDGAECGFQCALLYTTISGERRIRVLNLSIPCTNMLSNLFRSADLDSQFACMLKQAANEIPSKALPLVKEQATNDCITILHSYRKFCATVTSTGQLILPEALKLLPLYT-LALTKGVGLRMDGRIDDRSFWINHVSSLSTPLAIPLVYPRMIAV 955          
BLAST of EY749273 vs. ExPASy Swiss-Prot
Match: SC24B_ARATH (Protein transport protein Sec24-like At4g32640 OS=Arabidopsis thaliana GN=At4g32640 PE=1 SV=2)

HSP 1 Score: 301.982 bits (772), Expect = 3.389e-81
Identity = 154/204 (75.49%), Postives = 168/204 (82.35%), Query Frame = 3
Query:    6 TRPQVYYYYPFSALSDPAKLYNDLRWNITRPQGFEAVMRVRCSQGIQVQEYHGNFCKRIPTDIDLPAIDCNKAIMVTLKHDDKLQDGSECAFQCALLYTTVYGQRRIRVTTLSLPCTSNLSNLYRSADLDTQFTCFMKQAASEIPSTPLANVREQMMNLCVNALVSYRKFCATVSSSGQLILPEALKLFALCTPLH*LKSTGLR 617
            T  QVY YYPFSALSDP KLYNDL+WNITRPQGFEAVMRVRCSQGIQVQEY GNFCKRIPTDIDLPA            HDDKLQDG+ECAFQCALLYTT+YG+RRIRVTTLSL CT+ LSNL+R+ADLD+QF C +KQAA+EIPS  L  V+EQ  N C+NAL +YRKFCATV+SSGQLILPEALKLF L T L   KS GLR
Sbjct:  715 TGGQVYCYYPFSALSDPPKLYNDLKWNITRPQGFEAVMRVRCSQGIQVQEYSGNFCKRIPTDIDLPA------------HDDKLQDGAECAFQCALLYTTIYGERRIRVTTLSLSCTNMLSNLFRAADLDSQFACMLKQAANEIPSKALPLVKEQATNSCINALYAYRKFCATVTSSGQLILPEALKLFPLYT-LALTKSVGLR 905          
BLAST of EY749273 vs. ExPASy Swiss-Prot
Match: SC24D_HUMAN (Protein transport protein Sec24D OS=Homo sapiens GN=SEC24D PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 3.923e-37
Identity = 77/184 (41.85%), Postives = 113/184 (61.41%), Query Frame = 3
Query:   18 VYYYYPFSALSDPAKLYNDLRWNITRPQGFEAVMRVRCSQGIQVQEYHGNFCKRIPTDIDLPAIDCNKAIMVTLKHDDKLQDGSECAFQCALLYTTVYGQRRIRVTTLSLPCTSNLSNLYRSADLDTQFTCFMKQAASEIPSTPLANVREQMMNLCVNALVSYRKFCATVSSSGQLILPEALKL 569
            +Y Y  F    D  +  NDLR +I +  GF+A+MRVR S G +  ++ G       TD+++ AIDC+KA+ V  KHDDKL + S    QCA+LYTT+ GQRR+R+  L L C+S L++LY+S + D     F K A   +   PL  +RE ++N   + L  YRK CA+ S++ QLILP+++K+
Sbjct:  658 LYKYNNFQMHLDRQQFLNDLRNDIEKKIGFDAIMRVRTSTGFRATDFFGGILMNNTTDVEMAAIDCDKAVTVEFKHDDKLSEDSGALIQCAVLYTTISGQRRLRIHNLGLNCSSQLADLYKSCETDALINFFAKSAFKAVLHQPLKVIREILVNQTAHMLACYRKNCASPSAASQLILPDSMKV 841          
BLAST of EY749273 vs. ExPASy Swiss-Prot
Match: SC24C_HUMAN (Protein transport protein Sec24C OS=Homo sapiens GN=SEC24C PE=1 SV=3)

HSP 1 Score: 152.525 bits (384), Expect = 3.321e-36
Identity = 78/188 (41.49%), Postives = 114/188 (60.64%), Query Frame = 3
Query:    6 TRPQVYYYYPFSALSDPAKLYNDLRWNITRPQGFEAVMRVRCSQGIQVQEYHGNFCKRIPTDIDLPAIDCNKAIMVTLKHDDKLQDGSECAFQCALLYTTVYGQRRIRVTTLSLPCTSNLSNLYRSADLDTQFTCFMKQAASEIPSTPLANVREQMMNLCVNALVSYRKFCATVSSSGQLILPEALKL 569
            T   VY Y  F   +D  +  +DLR ++ +  GF+AVMRVR S GI+  ++ G F     TD++L  +D +K + V  KHDD+L + S    QCALLYT+  GQRR+R+  L+L C + L++LYR+ + DT      K A   + ++P+  VR+ ++  C   L  YRK CA+ SS+GQLILPE +KL
Sbjct:  716 TGGSVYKYASFQVENDQERFLSDLRRDVQKVVGFDAVMRVRTSTGIRAVDFFGAFYMSNTTDVELAGLDGDKTVTVEFKHDDRLNEESGALLQCALLYTSCAGQRRLRIHNLALNCCTQLADLYRNCETDTLINYMAKFAYRGVLNSPVKAVRDTLITQCAQILACYRKNCASPSSAGQLILPECMKL 903          
BLAST of EY749273 vs. ExPASy Swiss-Prot
Match: SC24A_ARATH (Protein transport protein Sec24-like At3g07100 OS=Arabidopsis thaliana GN=At3g07100 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 2.157e-27
Identity = 73/192 (38.02%), Postives = 102/192 (53.12%), Query Frame = 3
Query:    6 TRPQVYYYYPFSALSDPAKLYNDLRWNITRPQGFEAVMRVRCSQGIQVQEYHGNFCKRIPTDIDLPAIDCNKAIMVTLKHDDKLQDGSECAFQCALLYTTVYGQRRIRVTTLSLPCTSNLSNLYRSADLDTQFTCFMKQAASEIPSTPLANVREQMMNLCVNALVSYRKFCATVSSSG-QLILPEALKLFAL 578
            T  QVYYY  F +     KL ++L  ++TR   +EAVMR+RC +GI+   YHGNF  R    + LPA+DC+KA  + L  ++ L       FQ ALLYT   G+RRIRV T   P  ++L  +YR AD  +  + + + A  +  S  L + R  +    V AL  YR   A     G +L+ PE+LK   L
Sbjct:  653 TGGQVYYYPGFQSSVHGDKLRHELARDLTRETAWEAVMRIRCGKGIRFSSYHGNFMLRSTDLLALPAVDCDKAYAMQLSLEETLLTSQTVYFQVALLYTASCGERRIRVHTSVAPVVTDLGEMYRQADTGSIVSLYARLAIEKSLSAKLDDARNAIQQKIVKALKEYRNLHAVQHRLGSRLVYPESLKFLPL 844          
BLAST of EY749273 vs. ExPASy Swiss-Prot
Match: YNB3_SCHPO (Uncharacterized protein C4.03c OS=Schizosaccharomyces pombe GN=SPBC4.03c PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.806e-27
Identity = 70/202 (34.65%), Postives = 112/202 (55.45%), Query Frame = 3
Query:   15 QVYYYYPFSALSDPAKLYNDLRWNITRPQGFEAVMRVRCSQGIQVQEYHGNFCKRIPTDIDLPAIDCNKAIMVTLKHDDKLQDGSECAFQCALLYTTVYGQRRIRVTTLSLPCTSNLSNLYRSADLDTQFTCFMKQAASEIPSTPLANVREQMMNLCVNALVSYRKFCATVSSSGQLILPEALKLFALCTPLH*LKSTGLRN 620
            Q+Y+Y  F A  D ++L  DL  ++TR QG+  +++ RCS G++V +Y GNF +R P DI+  ++D +K++ V   +D KL    +  FQ A+LYTT  G+RR+RV       TS   +    A ++       K A++ I +  L +   +++   V  L SYRK  A   + GQL+LP+ L L  +   L  LKS+ +R+
Sbjct:  502 QIYHYSNFVADRDGSRLKQDLFRSVTREQGYRVMLKTRCSNGLRVSKYLGNFLQRTPQDIEFGSLDADKSVTVLFSYDGKLNGALDAHFQTAVLYTTPSGERRVRVVNYCCAVTSKSYDTISLAIVEPIVAVLAKIASTNIAAGSLKDTSVRLVEGVVKILSSYRKVAANRLTPGQLVLPKNLVLLPILI-LAVLKSSAIRS 702          
BLAST of EY749273 vs. ExPASy Swiss-Prot
Match: SC24B_HUMAN (Protein transport protein Sec24B OS=Homo sapiens GN=SEC24B PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 1.071e-26
Identity = 70/190 (36.84%), Postives = 106/190 (55.79%), Query Frame = 3
Query:   18 VYYYYPFSALSDPA---KLYNDLRWNITRPQGFEAVMRVRCSQGIQVQEYHGNFCKRIPTDIDLPAIDCNKAIMVTLKHDDKLQDGSECAFQCALLYTTVYGQRRIRVTTLSLPCTSNLSNLYRSADLDTQFTCFMKQAASEIPSTPLANVREQMMNLCVNALVSYRKFCATVSSSGQLILPEALKLFAL 578
            +YYY  F    +P+   KL  DL+  +TR  GFEAVMR+RC++G+ +  +HGNF  R    + L  I+ +    V L  ++ L D S   FQ ALLYT+  G+RRIRV TL LP  S+L+++Y   D+          A     S+ L++ R+ ++N  V++L +Y    + +  S  L+ P +LKLF L
Sbjct:  888 IYYYPSFHYTHNPSQAEKLQKDLKRYLTRKIGFEAVMRIRCTKGLSMHTFHGNFFVRSTDLLSLANINPDAGFAVQLSIEESLTDTSLVCFQTALLYTSSKGERRIRVHTLCLPVVSSLADVYAGVDVQAAICLLANMAVDRSVSSSLSDARDALVNAVVDSLSAYGSTVSNLQHSA-LMAPSSLKLFPL 1076          
BLAST of EY749273 vs. ExPASy Swiss-Prot
Match: SC24A_HUMAN (Protein transport protein Sec24A OS=Homo sapiens GN=SEC24A PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.309e-24
Identity = 65/190 (34.21%), Postives = 106/190 (55.79%), Query Frame = 3
Query:   18 VYYYYPFSALSDPA---KLYNDLRWNITRPQGFEAVMRVRCSQGIQVQEYHGNFCKRIPTDIDLPAIDCNKAIMVTLKHDDKLQDGSECAFQCALLYTTVYGQRRIRVTTLSLPCTSNLSNLYRSADLDTQFTCFMKQAASEIPSTPLANVREQMMNLCVNALVSYRKFCATVSSSGQLILPEALKLFAL 578
            VYYY  +    +P    KL  +L+  +TR  GFEAVMR+RC++G+ +  +HGNF  R    + LP ++ +    V +  ++ L D    +FQ ALLYT+  G+RRIRV TL LP  S L++++  AD+          A     +  L++ R+ ++N  +++L +YR    +    G L++P +L+LF L
Sbjct:  713 VYYYPSYHHQHNPVQVQKLQKELQRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGYAVQMSVEESLTDTQLVSFQSALLYTSSKGERRIRVHTLCLPVVSTLNDVFLGADVQAISGLLANMAVDRSMTASLSDARDALVNAVIDSLSAYRSSVLSNQQPG-LMVPFSLRLFPL 901          
BLAST of EY749273 vs. ExPASy Swiss-Prot
Match: SC24A_MOUSE (Protein transport protein Sec24A OS=Mus musculus GN=Sec24a PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.233e-24
Identity = 65/190 (34.21%), Postives = 104/190 (54.74%), Query Frame = 3
Query:   18 VYYYYPFSALSDPA---KLYNDLRWNITRPQGFEAVMRVRCSQGIQVQEYHGNFCKRIPTDIDLPAIDCNKAIMVTLKHDDKLQDGSECAFQCALLYTTVYGQRRIRVTTLSLPCTSNLSNLYRSADLDTQFTCFMKQAASEIPSTPLANVREQMMNLCVNALVSYRKFCATVSSSGQLILPEALKLFAL 578
            VYYY  +    +P    KL  +L   +TR  GFEAVMR+RC++G+ +  +HGNF  R    + LP ++ +    V +  ++ L D    +FQ ALLYT+  G+RRIRV TL LP  S L+ ++  AD+          A     +  L++ R+ ++N  +++L +YR    +    G L++P +L+LF L
Sbjct:  710 VYYYPSYHHQHNPVQVQKLQKELHRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGYAVQMSVEESLTDTQLVSFQSALLYTSSKGERRIRVHTLCLPVVSTLNEVFLGADVQAISGLLANMAVDRSVTASLSDARDALVNAVIDSLSAYRSSVLSGQQPG-LMVPFSLRLFPL 898          
BLAST of EY749273 vs. ExPASy Swiss-Prot
Match: SC24A_BOVIN (Protein transport protein Sec24A OS=Bos taurus GN=SEC24A PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.233e-24
Identity = 65/190 (34.21%), Postives = 105/190 (55.26%), Query Frame = 3
Query:   18 VYYYYPFSALSDPA---KLYNDLRWNITRPQGFEAVMRVRCSQGIQVQEYHGNFCKRIPTDIDLPAIDCNKAIMVTLKHDDKLQDGSECAFQCALLYTTVYGQRRIRVTTLSLPCTSNLSNLYRSADLDTQFTCFMKQAASEIPSTPLANVREQMMNLCVNALVSYRKFCATVSSSGQLILPEALKLFAL 578
            VYYY  +    +P    KL  +L+  +TR  GFEAVMR+RC++G+ +  +HGNF  R    + LP ++ +    V +  ++ L D    +FQ ALLYT+  G+RRIRV TL LP  S L+ ++  AD+          A     +  L++ R+ ++N  +++L +YR    +    G L++P +L+LF L
Sbjct:  719 VYYYPSYHHQHNPIQVQKLEKELQRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGYAVQMSVEESLTDTQLVSFQSALLYTSSKGERRIRVHTLCLPVVSTLNEVFLGADVQAISGLLANMAVDRSVTASLSDARDALVNAVIDSLSAYRSSALSNQQPG-LMVPFSLRLFPL 907          
The following BLAST results are available for this feature:
BLAST of EY749273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
SC24C_ARATH2.051e-8669.75Protein transport protein Sec24-like CEF OS=Arabid... [more]
SC24B_ARATH3.389e-8175.49Protein transport protein Sec24-like At4g32640 OS=... [more]
SC24D_HUMAN3.923e-3741.85Protein transport protein Sec24D OS=Homo sapiens G... [more]
SC24C_HUMAN3.321e-3641.49Protein transport protein Sec24C OS=Homo sapiens G... [more]
SC24A_ARATH2.157e-2738.02Protein transport protein Sec24-like At3g07100 OS=... [more]
YNB3_SCHPO4.806e-2734.65Uncharacterized protein C4.03c OS=Schizosaccharomy... [more]
SC24B_HUMAN1.071e-2636.84Protein transport protein Sec24B OS=Homo sapiens G... [more]
SC24A_HUMAN1.309e-2434.21Protein transport protein Sec24A OS=Homo sapiens G... [more]
SC24A_MOUSE2.233e-2434.21Protein transport protein Sec24A OS=Mus musculus G... [more]
SC24A_BOVIN2.233e-2434.21Protein transport protein Sec24A OS=Bos taurus GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-072-A05-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY749273 ID=EY749273; Name=EY749273; organism=Citrus sinensis; type=EST; length=964bp
CACCCACGCGTCCGCAGGTTTATTATTACTACCCATTTTCAGCGCTTTCT
GATCCTGCAAAATTGTACAATGACCTTAGATGGAACATCACAAGGCCCCA
AGGATTTGAGGCAGTAATGCGCGTCAGATGCAGCCAGGGTATCCAAGTCC
AAGAATACCATGGGAACTTCTGCAAACGGATTCCAACAGACATTGACCTA
CCTGCGATTGACTGTAACAAAGCTATAATGGTAACCTTAAAGCATGATGA
TAAATTGCAGGATGGCTCAGAATGTGCTTTTCAGTGCGCCCTTCTTTATA
CCACTGTTTATGGCCAAAGACGAATTCGAGTTACAACTTTATCTTTGCCA
TGCACCAGTAATTTAAGTAATCTGTACCGTTCAGCTGACTTGGATACTCA
ATTTACATGTTTTATGAAGCAAGCGGCAAGTGAAATTCCTTCAACCCCAC
TAGCAAATGTCCGGGAACAAATGATGAACCTTTGCGTAAATGCTCTGGTT
TCATATCGTAAATTTTGTGCGACAGTATCATCATCTGGGCAGCTTATTCT
TCCAGAGGCTCTGAAGCTTTTTGCCCTTTGTACCCCCTTGCATTAATTAA
AAAGTACAGGATTGCGAAACTGATGGCAAAATAAATGATCCAATCTTTTT
GGAAAACTTTATGTTTCTTTCTGTTTCTATTCCCTTTTTGCGGTCCCTTT
TGGGAACCCCAAGGATGGGGGCTATCCCTGAACTTTGACAAGGGAAAAAA
AAGGGTCCTTTTATTTCCCCCTTTCTTTCCTCTTTCTAATGGAAACCCGG
GAGGGAAGAAAGGGAAACTTATCTTCTCTAAAAAAAGGGGGAGGAATAGT
TTTAAAAAATTATTTTGGGGAGCCCACTGGGGGGAATTCACAGAAAATCC
TTGCCACCTCCACAACGTGCTCGCGCGCAAAATTCCCCCCCGCGGTTATA
AAAAAAAAAAATCC
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