EY749247

Overview
NameEY749247
Unique NameEY749247
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length931
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY749247 vs. ExPASy Swiss-Prot
Match: UPL3_ARATH (E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana GN=UPL3 PE=1 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 3.325e-70
Identity = 135/205 (65.85%), Postives = 162/205 (79.02%), Query Frame = 3
Query:   18 FRLLGRVMAQALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIVCRKQHLESMTSDNCEEVVDLRFRGAPIEDLCLDFTLPGYPDYILKPRDENVDINNLEEYISLVVDATGRTGIMRQMEAFRAGFDQVFDITSLQIFTPHELDHLALGRKELWEACGALLTYKNSIYGNTAKNPAIVNLLKIMGKISTN 632
            FRLLGRVMA+ALQDGRLLD+P STAFYKL+LG ELDLHDI+ FDAE GK LQEL V+V RK +LE +  DN   + DL  RG  IEDL L+FTLPGYP+YIL+  DE VDI NLEEYISLVVDAT + G+ RQ+EAFR+GF+QVFDITSLQIFTP ELD+L  GR+ELWE    L  +    +G  AK+PAI+NLL+IMG+++ +
Sbjct: 1592 FRLLGRVMAKALQDGRLLDVPLSTAFYKLILGQELDLHDIVLFDAELGKTLQELRVVVARKHYLEGVGGDNSSTISDLCLRGCRIEDLSLEFTLPGYPEYILRSGDEIVDITNLEEYISLVVDATVKRGVTRQIEAFRSGFNQVFDITSLQIFTPSELDYLLCGRRELWEV-ETLAEHIKFDHGYNAKSPAIINLLEIMGELTAD 1795          
BLAST of EY749247 vs. ExPASy Swiss-Prot
Match: UPL4_ARATH (E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana GN=UPL4 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.682e-40
Identity = 95/202 (47.03%), Postives = 127/202 (62.87%), Query Frame = 3
Query:   15 RFRLLGRVMAQALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIVCRKQHLESMTSDNCEEVVDLRFRGAPIEDLCLDFTLPGYPDYILKPRDEN--VDINNLEEYISLVVDATGRTGIMRQMEAFRAGFDQVFDITSLQIFTPHELDHLALGRKELWEACGALLTYKNSIYGNTAKNPAIVNLLKIM 614
            +F LLG V+A+ALQDGR+LDLP S AFYKL+LG EL   DI   D E  K L EL  +V RK+       D+     DL F G  IEDLCL+F LPGY DY L P   N  V+++NLEEYI  +V+AT   GI +Q+EAFR+GF+QVF I  L+IF   EL+ +  G  +L+ +   +L +    +G T+ +P +  LL+I+
Sbjct: 1215 KFVLLGTVVAKALQDGRVLDLPLSKAFYKLILGQELSSFDIHFVDPELCKTLVELQALVRRKKLFAEAHGDSGAAKCDLSFHGTKIEDLCLEFALPGYTDYDLAPYSANDMVNLDNLEEYIKGIVNATVCNGIQKQVEAFRSGFNQVFSIEHLRIFNEEELETMLCGECDLF-SMNEVLDHIKFDHGYTSSSPPVEYLLQIL 1415          
BLAST of EY749247 vs. ExPASy Swiss-Prot
Match: TRIPC_HUMAN (Probable E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens GN=TRIP12 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.719e-29
Identity = 82/210 (39.05%), Postives = 121/210 (57.62%), Query Frame = 3
Query:   12 VRFRLLGRVMAQALQDGRLLDLPFSTAFYKLVLGHELDL--HDIIPFDAEFGKILQELHVIVCRKQHLE---SMTSDNCEEVVD-LRFRGAPIEDLCLDFTLPGYPDYILKP--RDENVDINNLEEYISLVVDATGRTGIMRQMEAFRAGFDQVFDITSLQIFTPHELDHLALGRK-ELWEACGALLTYKNSIYGNTAKNPAIVNLLKIM 614
            ++FR LG++MA+A+ D RL+DLP    FYK +L  E  L  HD+   D    + +  L  IV +K+ LE   S T ++ +  ++ L   G  +EDL LDFTLPG+P+  LK   +D  V I+NLEEY+ LV+      G+ RQ ++FR GF+ VF ++ LQ F P ELD L  G K + W+A   L+      +G T  + A+  L +I+
Sbjct: 1695 MKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLTMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDGFESVFPLSHLQYFYPEELDQLLCGSKADTWDA-KTLMECCRPDHGYTHDSRAVKFLFEIL 1903          
BLAST of EY749247 vs. ExPASy Swiss-Prot
Match: YDE1_SCHPO (Probable ubiquitin fusion degradation protein C12B10.01c OS=Schizosaccharomyces pombe GN=SPAC12B10.01c PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.241e-16
Identity = 61/205 (29.76%), Postives = 104/205 (50.73%), Query Frame = 3
Query:   18 FRLLGRVMAQALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIVCRKQHLESMTSDNCEEVVDLRFRGAPIEDLCLDFTLPGYPDYILKPRDENVDIN--NLEEYISLVVDATGRTGIMRQMEAFRAGFDQVFDITSLQIFTPHELDHLALGRKELWEACGALLTYKNSIYGNTAKNPAIVNLLKIMGKIS 626
            F  LG+ +A+++ D R++ + F+  F+   +   L +  +   D      L+ L  ++  K    + T        D++     +EDL LDFTLPG+P   L P   +  +   N+ +Y++ V+D T   G+ +Q+EAF+ GF  VF  TSLQ+ T HEL  L     E W +   L+    + +G T ++P I  LL +M +++
Sbjct: 1374 FFALGQFVARSIYDSRIISIQFNPLFFARNI--PLTISSVAKVDKGLANSLRYLEKLIPGKNPTNAET--------DIK-----LEDLHLDFTLPGFPSIELIPDGASTPVTTFNVSDYLNYVIDYTVGKGVQQQLEAFQNGFSSVFPYTSLQVLTEHELVTLFGTVDEDW-SYATLMKSIVADHGYTMESPTIQRLLTLMSQMN 1562          
BLAST of EY749247 vs. ExPASy Swiss-Prot
Match: UFD4_YEAST (Ubiquitin fusion degradation protein 4 OS=Saccharomyces cerevisiae GN=UFD4 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.528e-14
Identity = 62/203 (30.54%), Postives = 101/203 (49.75%), Query Frame = 3
Query:   18 FRLLGRVMAQALQDGRLLDLPFSTAFYKLVLGHELDLHDI--IPFDAEFGKILQELHVIVCRKQHLESMTSDNCEEVVDLRFRGAPIEDLCLDFTLPGYPDYILKPRDENVDIN--NLEEYISLVVDATGRTGIMRQMEAFRAGFDQVFDITSLQIFTPHELDHLALGRKELWEACGALLTYKNSIYGNTAKNPAIVNLLKIM 614
            F  LG  +A++L D R+LD  FS  F++L+  H +   ++  +P D E   ++ EL         ++ + + + + +V  +     +E L L FT+PG  D  L P   N  +N  N+EEYI  V+D     GI +Q++AF  GF +VF    + I  P EL  +  GR E   +   L T  N+ +G T  +  I + + I+
Sbjct: 1204 FGYLGTFVARSLLDNRILDFRFSKVFFELL--HRMSTPNVTTVPSDVETCLLMIEL---------VDPLLAKSLKYIVANKDDNMTLESLSLTFTVPGNDDIELIPGGCNKSLNSSNVEEYIHGVIDQILGKGIEKQLKAFIEGFSKVFSYERMLILFPDELVDI-FGRVEEDWSMATLYTNLNAEHGYTMDSSIIHDFISII 1394          
BLAST of EY749247 vs. ExPASy Swiss-Prot
Match: UPL2_ARATH (E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana GN=UPL2 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.677e-13
Identity = 55/170 (32.35%), Postives = 87/170 (51.18%), Query Frame = 3
Query:   18 FRLLGRVMAQALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIVCRKQHLESMTSDNCEEVVDLRFRGAPIEDLCLDFTLPGYPDYILKPRDENVDI--NNLEEYISLVVDATGRTGIMRQMEAFRAGFDQVFDITSLQIFTPHELDHLALGRKEL 521
            F+ +GR++A+AL DG+LLD+ F+ +FYK +LG ++  HDI   D ++ K L+ L         LE+  SD    ++DL F     E+  + +      DY LKP   N+ +      EY+ LV D    + I  Q+ AF  G +++     + IF   EL+ L  G  E+
Sbjct: 3385 FKFVGRMVAKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWL---------LENDVSD----ILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVADHILTSAIRPQINAFLEGLNELIPRELVSIFNDKELELLISGLPEI 3541          
BLAST of EY749247 vs. ExPASy Swiss-Prot
Match: UPL1_ARATH (E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana GN=UPL1 PE=1 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 2.861e-13
Identity = 55/170 (32.35%), Postives = 86/170 (50.59%), Query Frame = 3
Query:   18 FRLLGRVMAQALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIVCRKQHLESMTSDNCEEVVDLRFRGAPIEDLCLDFTLPGYPDYILKPRDENVDI--NNLEEYISLVVDATGRTGIMRQMEAFRAGFDQVFDITSLQIFTPHELDHLALGRKEL 521
            F+ +GR++A+AL DG+LLD+ F+ +FYK +LG ++  HDI   D ++ K L+ L         LE+  SD    ++DL F     E+  + +      DY LKP   N+ +      EY+ LV        I  Q+ AF  GF+++     + IF   EL+ L  G  E+
Sbjct: 3408 FKFVGRMVAKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWL---------LENDVSD----ILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVAGHILTNAIRPQINAFLEGFNELIPRELVSIFNDKELELLISGLPEI 3564          
BLAST of EY749247 vs. ExPASy Swiss-Prot
Match: NEDD4_DROME (E3 ubiquitin-protein ligase Nedd-4 OS=Drosophila melanogaster GN=Nedd4 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.202e-11
Identity = 49/167 (29.34%), Postives = 78/167 (46.71%), Query Frame = 3
Query:   18 FRLLGRVMAQALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIVCRKQHLESMTSDNCEEVVDLRFRGAPIEDLCLDFTLPGY-PDYILKPRDENVDI--NNLEEYISLVVDATGRTGIMRQMEAFRAGFDQVFDITSLQIFTPHELDHLALG 509
            F+ +GR+   A+  G+LLD  F   FYK++L   +DL D+   D E+   L  +               +N   +++L F        CLD  + G    + LKP   N+D+   N +EYI LV++      +  QM +F  GF  +  +  ++IF  HEL+ L  G
Sbjct:  742 FKFIGRIAGMAVYHGKLLDAFFIRPFYKMMLQKPIDLKDMESVDTEYYNSLMWI--------------KENDPRILELTF--------CLDEDVFGQKSQHELKPGGANIDVTNENKDEYIKLVIEWRFVARVKEQMSSFLDGFGSIIPLNLIKIFDEHELELLMCG 886          
BLAST of EY749247 vs. ExPASy Swiss-Prot
Match: HECD1_HUMAN (E3 ubiquitin-protein ligase HECTD1 OS=Homo sapiens GN=HECTD1 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.677e-11
Identity = 57/201 (28.36%), Postives = 97/201 (48.26%), Query Frame = 3
Query:   78 PFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHV----IVCRKQHLESMTSDNCEEVVDLRFRGA----PIEDLCLDFT------LPGYPDYILKP--RDENVDINNLEEYISLVVDATGRTGIMRQMEAFRAGFDQVFDITSLQIFTPHELDHLALGRKELWEACGALLTYKNSIYGNTAKNPAIVNLLKIMGKISTN 632
            P   A++  +L  E D   + P  A F K +++L +    I+  K   E   +   +E+V     G+     IEDL L+F       + G+    LKP   DE + ++N EEY+ L+ D    TGI +QMEAFR GF++VF +  L  F+  E+  +  G +    A   ++ Y     G T  +P  +  ++++  +S++
Sbjct: 2336 PKPPAWFNGILTWE-DFELVNPHRARFLKEIKDLAIKRRQILSNKGLSEDEKNTKLQELVLKNPSGSGPPLSIEDLGLNFQFCPSSRIYGFTAVDLKPSGEDEMITMDNAEEYVDLMFDFCMHTGIQKQMEAFRDGFNKVFPMEKLSSFSHEEVQMILCGNQSPSWAAEDIINYTEPKLGYTRDSPGFLRFVRVLCGMSSD 2535          
The following BLAST results are available for this feature:
BLAST of EY749247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
UPL3_ARATH3.325e-7065.85E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis th... [more]
UPL4_ARATH4.682e-4047.03E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis th... [more]
TRIPC_HUMAN3.719e-2939.05Probable E3 ubiquitin-protein ligase TRIP12 OS=Hom... [more]
YDE1_SCHPO1.241e-1629.76Probable ubiquitin fusion degradation protein C12B... [more]
UFD4_YEAST7.528e-1430.54Ubiquitin fusion degradation protein 4 OS=Saccharo... [more]
UPL2_ARATH1.677e-1332.35E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis th... [more]
UPL1_ARATH2.861e-1332.35E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis th... [more]
NEDD4_DROME1.202e-1129.34E3 ubiquitin-protein ligase Nedd-4 OS=Drosophila m... [more]
HECD1_HUMAN2.677e-1128.36E3 ubiquitin-protein ligase HECTD1 OS=Homo sapiens... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-071-F11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY749247 ID=EY749247; Name=EY749247; organism=Citrus sinensis; type=EST; length=931bp
CCCCTTTTAGCGTCCGCTTCCGACTGCTTGGACGTGTAATGGCCCAAGCT
CTTCAAGATGGGAGGCTTTTAGACCTGCCATTTTCAACAGCATTCTACAA
ACTTGTTCTTGGTCACGAGCTTGATTTGCATGATATTATTCCCTTTGATG
CCGAGTTTGGGAAGATTTTGCAAGAGTTGCATGTCATCGTTTGTCGAAAA
CAACATTTAGAATCAATGACCTCTGATAATTGCGAAGAAGTTGTGGACTT
GCGTTTTCGTGGGGCCCCGATTGAAGATCTTTGCCTGGATTTTACTCTTC
CTGGTTATCCAGACTATATTTTGAAACCAAGAGATGAAAATGTTGACATT
AATAACTTGGAGGAATACATATCCTTGGTAGTTGATGCCACTGGCAGGAC
AGGCATCATGCGGCAAATGGAAGCTTTTAGAGCTGGCTTCGATCAGGTCT
TTGACATCACATCATTACAAATATTTACTCCTCATGAATTGGACCATCTG
GCTTTGGGCCGCAAAGAGTTGTGGGAAGCCTGCGGGGCTTTGCTGACATA
TAAAAACTCCATCTATGGGAACACTGCCAAGAACCCTGCAATTGTTAACT
TACTAAAGATCATGGGAAAAATCTCCACCAATCACCCCGCGCCCTCCGCC
GATTGGTAACCGGGGGGCCCCCCCATCCCCCCCGGGGGGGCGCGCGGGGG
GCGTACTAGACCCCACCCTCACTCCCCGCGACGAACGACCTTGCCCCTCT
CGACCTACACAGCCCCAATCAAAGAGGGAACCGGCCCCTCAATAAATCGC
CCGGAAAAAGTATATTACGACACGGGTCTATTGTTCTTGGGCCCAACTTA
CCCTGCTAGGTTCCTCCCCTTACCCCCCTTCCCCAACAGAACATTAATTC
GCTTACACAAAAAATGCCCTCTCGTTCTTTT
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