EY697364
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY697364 vs. ExPASy Swiss-Prot
Match: RD23A_ARATH (Putative DNA repair protein RAD23-1 OS=Arabidopsis thaliana GN=RAD23-1 PE=2 SV=3) HSP 1 Score: 248.054 bits (632), Expect = 4.299e-65 Identity = 123/146 (84.25%), Postives = 136/146 (93.15%), Query Frame = 2 Query: 35 EMFPQETLSGAPASGLGSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHQAEFLQLINEPVDGS--EGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGDFED 466 ++FPQET++ A + LG+L+FLRNN QFQ LR+MV SNPQILQPMLQELGKQNPQLLRLIQE+QAEFLQL+NEP +GS EGDMFDQPEQ+MPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLEN+GDFED Sbjct: 226 DLFPQETVAAAGSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 371
BLAST of EY697364 vs. ExPASy Swiss-Prot
Match: RD23B_ARATH (Putative DNA repair protein RAD23-2 OS=Arabidopsis thaliana GN=RAD23-2 PE=2 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 1.582e-59 Identity = 111/146 (76.03%), Postives = 131/146 (89.73%), Query Frame = 2 Query: 35 EMFPQETLSGAPASGLGSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHQAEFLQLINEPVDGSEG--DMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGDFED 466 ++FPQE +S A LG+L+FLR N QFQ LRSMV SNPQILQPMLQELGKQNPQLLRLIQE+QAEFLQL+NEP +GS+G D+FDQP+Q+MPH++NVTP EQE+I+RLEAMGFDRA+VIEAFL+CDRNEELAANYLLE++ DFED Sbjct: 223 DLFPQEAVSDAAGGDLGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVIEAFLSCDRNEELAANYLLEHSADFED 368
BLAST of EY697364 vs. ExPASy Swiss-Prot
Match: RD23D_ARATH (Putative DNA repair protein RAD23-4 OS=Arabidopsis thaliana GN=RAD23-4 PE=2 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 3.906e-50 Identity = 97/143 (67.83%), Postives = 121/143 (84.62%), Query Frame = 2 Query: 38 MFPQETLSGAPASGLGSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHQAEFLQLINEPVDGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGDFED 466 +FPQ + +G G+LDFLRN+QQFQALR+MVQ+NPQILQPMLQELGKQNPQL+RLIQEHQA+FL+LINEPV+G E ++ +Q E MP A+ VTP E+EAI+RLE MGFDRA+V+E F AC++NEELAANYLL++ +FED Sbjct: 236 LFPQGMPAADAGAGAGNLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVEGEE-NVMEQLEAAMPQAVTVTPEEREAIERLEGMGFDRAMVLEVFFACNKNEELAANYLLDHMHEFED 377
BLAST of EY697364 vs. ExPASy Swiss-Prot
Match: RD23C_ARATH (Putative DNA repair protein RAD23-3 OS=Arabidopsis thaliana GN=RAD23-3 PE=2 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 2.218e-45 Identity = 93/148 (62.84%), Postives = 118/148 (79.73%), Query Frame = 2 Query: 35 EMFPQETLSGAPASGLGSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHQAEFLQLINEPVD--GSEGDMFDQPEQDM--PHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGDFED 466 ++FPQ + G G+LDFLRN+QQFQALR+MVQ+NPQ+LQPMLQELGKQNP L+RLIQ+HQA+FL+LINEPV+ G G++ Q M P AI VT E+EAI+RLEAMGF+RALV+E F AC++NEELAANYLL++ +FE+ Sbjct: 272 DLFPQGLPNVGGNPGAGTLDFLRNSQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNLLGQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMHEFEE 419
BLAST of EY697364 vs. ExPASy Swiss-Prot
Match: RAD23_ORYSJ (Probable DNA repair protein RAD23 OS=Oryza sativa subsp. japonica GN=RAD23 PE=1 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 2.452e-44 Identity = 90/148 (60.81%), Postives = 116/148 (78.38%), Query Frame = 2 Query: 26 IFPEMFPQETLSGAPASGLGSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHQAEFLQLINEPVDG-SEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGDFED 466 +FP+ P + A+GLG+LD LRNN QF+ L S+VQ+NPQILQP+LQELGKQNPQ+L+LIQE+QAEFL LINEP +G E ++ DQ + MP I VTP E EAI RLEAMGFDRALV++ F AC+++E+LAANYLL++ +F+D Sbjct: 244 LFPQALPN---ASTDAAGLGNLDALRNNAQFRTLLSLVQANPQILQPLLQELGKQNPQILQLIQENQAEFLHLINEPAEGDDEENLLDQFPEAMPQTIAVTPEENEAILRLEAMGFDRALVLDVFFACNKDEQLAANYLLDHMNEFDD 388
BLAST of EY697364 vs. ExPASy Swiss-Prot
Match: RD23B_HUMAN (UV excision repair protein RAD23 homolog B OS=Homo sapiens GN=RAD23B PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.169e-28 Identity = 63/139 (45.32%), Postives = 92/139 (66.19%), Query Frame = 2 Query: 71 ASGLGSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHQAEFLQLINEPVD----------GSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGD 457 +SG L+FLRN QFQ +R ++Q NP +L +LQ++G++NPQLL+ I +HQ F+Q++NEPV G G + + M + I VTP E+EAI+RL+A+GF LVI+A+ AC++NE LAAN+LL+ D Sbjct: 270 SSGGHPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAGGQGGGGGGGSGGIAEAGSGHMNY-IQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFD 407
BLAST of EY697364 vs. ExPASy Swiss-Prot
Match: RD23A_MOUSE (UV excision repair protein RAD23 homolog A OS=Mus musculus GN=Rad23a PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 9.363e-28 Identity = 64/140 (45.71%), Postives = 95/140 (67.86%), Query Frame = 2 Query: 71 ASGLGSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHQAEFLQLINEP---------VDGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGDFE 463 A+G L+FLR+ QFQ +R ++Q NP +L +LQ+LG++NPQLL+ I HQ +F+Q++NEP V+G G + ++ Q + I VTP E+EAI+RL+A+GF +LVI+A+ AC++NE LAAN+LL D E Sbjct: 226 AAGENPLEFLRDQPQFQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGELADISDVEGEVGAIGEEAPQ--MNYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQNFDDE 363
BLAST of EY697364 vs. ExPASy Swiss-Prot
Match: RD23A_HUMAN (UV excision repair protein RAD23 homolog A OS=Homo sapiens GN=RAD23A PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 9.363e-28 Identity = 64/140 (45.71%), Postives = 95/140 (67.86%), Query Frame = 2 Query: 71 ASGLGSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHQAEFLQLINEP---------VDGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGDFE 463 A+G L+FLR+ QFQ +R ++Q NP +L +LQ+LG++NPQLL+ I HQ +F+Q++NEP V+G G + ++ Q + I VTP E+EAI+RL+A+GF +LVI+A+ AC++NE LAAN+LL D E Sbjct: 226 AAGENPLEFLRDQPQFQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGELADISDVEGEVGAIGEEAPQ--MNYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQNFDDE 363
BLAST of EY697364 vs. ExPASy Swiss-Prot
Match: RD23B_BOVIN (UV excision repair protein RAD23 homolog B OS=Bos taurus GN=RAD23B PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.223e-27 Identity = 63/139 (45.32%), Postives = 92/139 (66.19%), Query Frame = 2 Query: 71 ASGLGSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHQAEFLQLINEPVD----------GSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGD 457 +SG L+FLRN QFQ +R ++Q NP +L +LQ++G++NPQLL+ I +HQ F+Q++NEPV G G + + M + I VTP E+EAI+RL+A+GF LVI+A+ AC++NE LAAN+LL+ D Sbjct: 269 SSGGHPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAGGQGGGGGGGSGGIAEAGGGHMNY-IQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFD 406
BLAST of EY697364 vs. ExPASy Swiss-Prot
Match: RD23A_BOVIN (UV excision repair protein RAD23 homolog A OS=Bos taurus GN=RAD23A PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.724e-27 Identity = 63/139 (45.32%), Postives = 94/139 (67.63%), Query Frame = 2 Query: 74 SGLGSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHQAEFLQLINEP---------VDGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGDFE 463 +G L+FLR+ QFQ +R ++Q NP +L +LQ+LG++NPQLL+ I HQ +F+Q++NEP V+G G + ++ Q + I VTP E+EAI+RL+A+GF +LVI+A+ AC++NE LAAN+LL D E Sbjct: 226 AGENPLEFLRDQPQFQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGELVDISDVEGEVGAIGEEAPQ--MNYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQNFDDE 362 The following BLAST results are available for this feature:
BLAST of EY697364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >EY697364 ID=EY697364; Name=EY697364; organism=Citrus sinensis; type=EST; length=793bpback to top |