EY695789

Overview
NameEY695789
Unique NameEY695789
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY695789 vs. ExPASy Swiss-Prot
Match: PAP8_ARATH (Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana GN=PAP8 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 7.440e-75
Identity = 146/237 (61.60%), Postives = 178/237 (75.11%), Query Frame = 3 
Query:   15 AFSLTLSSPVSKPHTFCTSYYSKPINASFSASLPCK----RSPRTALKIVRAVSISSPDLRTGPDDLVASILSKVNQSDGGVSLXXXXXXXXXXXXXXLQKYCVEAPVKCPLIFGEWDVVYCSVPTSPGGGYRSAFGRLFFKTKEMIQAVEAPDTVRNKVSFTALGFLDGEVSLKGKLNALDEKWIQVVFEPPELKVGGLEFRYGGQSEVKLQITYIDEKIRLGLXSRGSLFVFQRR 713
            A SLT++S  S+P T   S  S+ +N     S+P K    RS R  L +V +VS  + +LRTGPDDL++++LSKV  SDGGV+L              LQKYCV+ PVK PLIFG+W+VVYCS PTSPGGGYRS  GRLFFKTKEMIQA++APD VRNKVS  A GFLDG+VSL GKL ALD +W+QV+FEPPE+KVG LEF+YG +SEVKL+ITY+DEK+RLGL S+GSLFVF+RR
Sbjct:    5 ASSLTIASSFSEPRTQIHS--SRRLNLPLQYSIPYKVLRSRSRRLGL-VVSSVSAPNVELRTGPDDLISTLLSKVANSDGGVTLSPEQHKEVAQVAGELQKYCVKEPVKNPLIFGDWEVVYCSRPTSPGGGYRSVIGRLFFKTKEMIQAIDAPDIVRNKVSINAFGFLDGDVSLTGKLKALDSEWVQVIFEPPEIKVGSLEFKYGFESEVKLRITYVDEKLRLGLGSKGSLFVFRRR 238
The following BLAST results are available for this feature:
BLAST of EY695789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PAP8_ARATH7.440e-7561.60Probable plastid-lipid-associated protein 8, chlor... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-040-C09-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY695789 ID=EY695789; Name=EY695789; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGGCTGCTTTTTCTCTTACACTCTCATCCCCTGTTTCTAAA
CCCCACACATTCTGCACAAGTTATTATTCAAAACCCATAAACGCAAGTTT
TTCAGCTTCACTTCCTTGCAAAAGAAGTCCTCGCACCGCACTGAAAATCG
TCAGGGCTGTTTCCATCTCCAGCCCAGATCTGCGAACCGGTCCCGACGAT
TTGGTTGCTTCTATCCTCTCCAAGGTGAACCAATCGGATGGAGGAGTTTC
ACTAGCCAAAGAAGAACACAAAGAGGTCGCTGAAGTTGCTCAAGAGTTGC
AAAAATATTGTGTTGAAGCACCAGTAAAATGCCCTTTAATCTTTGGAGAA
TGGGATGTCGTGTACTGTTCAGTGCCAACTTCACCTGGGGGTGGCTACAG
AAGTGCATTTGGCCGTCTTTTCTTCAAAACAAAGGAAATGATTCAGGCTG
TTGAAGCTCCTGACACTGTTAGAAACAAGGTTTCCTTCACCGCTCTGGGT
TTTCTTGACGGAGAGGTCTCTTTGAAAGGAAAGCTTAATGCTCTGGATGA
GAAATGGATTCAAGTTGTATTTGAACCACCTGAACTGAAAGTTGGAGGAT
TGGAGTTCCGATATGGCGGTCAGAGTGAGGTTAAGTTGCAGATTACATAC
ATAGATGAAAAGATCAGGCTTGGGTTANGATCGAGAGGGTCACTATTTGT
TTTCCAGAGACGCACACAAGCAGCATAGCTGGACAGAGNTAAAGTTTGTG
CTTTGTGTCTGTAAATCTGAATGCNNTCTTGTATGCNAGCTATGCCCGTG
ATAGCAAATTANGGCAGAACTGATGCTCAGCGCCATACGTATCATCGTAA
CTGTATCACACTCACTGGTNATGATAGAACATGCATCTGAATATGCNTAT
CTCGTCAG
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