EY714275

Overview
NameEY714275
Unique NameEY714275
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY714275 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.563e-21
Identity = 34/63 (53.97%), Postives = 42/63 (66.67%), Query Frame = 3
Query:  639 FYLDS*LIFQKMNSDTEYVRDELDFEFLGNRNGQPYTVQTNIYADGKSDRVQRVNLWFDPAAD 827
            FYL S       NS+     DE+DFEFLGNR GQPY +QTN++  G  +R QR+NLWFDP+ D
Sbjct:   95 FYLSS------QNSE----HDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKD 147          

HSP 2 Score: 53.5286 bits (127), Expect = 1.563e-21
Identity = 25/37 (67.57%), Postives = 28/37 (75.68%), Query Frame = 1
Query:  430 FLGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYV 540
            + G GF SK  YLFG  SM IK+V GDSAGTVTAFY+
Sbjct:   61 YTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYL 97          
BLAST of EY714275 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.478e-21
Identity = 35/63 (55.56%), Postives = 42/63 (66.67%), Query Frame = 3
Query:  639 FYLDS*LIFQKMNSDTEYVRDELDFEFLGNRNGQPYTVQTNIYADGKSDRVQRVNLWFDPAAD 827
            FYL S       NS+     DE+DFEFLGNR GQPY +QTN+++ GK DR QR+ LWFDP  D
Sbjct:   95 FYLSS------QNSE----HDEIDFEFLGNRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKD 147          

HSP 2 Score: 50.8322 bits (120), Expect = 4.478e-21
Identity = 24/35 (68.57%), Postives = 27/35 (77.14%), Query Frame = 1
Query:  436 GCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYV 540
            G GF ++  YLFG  SM IKLV GDSAGTVTAFY+
Sbjct:   63 GTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYL 97          
BLAST of EY714275 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.341e-20
Identity = 48/66 (72.73%), Postives = 54/66 (81.82%), Query Frame = 3
Query:  672 MNSDTEYVRDELDFEFLGNRNGQPYTVQTNIYADGKSDRVQRVNLWFDPAADI-TFTLSLEHHHIV 866
            MNSDT  VRDELDFEFLGNR+GQPY+VQTNI+A GK DR QRVNLWFDP+ D  T+T+   H HIV
Sbjct:  100 MNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQRVNLWFDPSMDYHTYTILWSHKHIV 165          

HSP 2 Score: 71.2478 bits (173), Expect = 8.760e-12
Identity = 32/35 (91.43%), Postives = 35/35 (100.00%), Query Frame = 1
Query:  436 GCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYV 540
            GCGFASKR+YLFGRVSMKIKL+PGDSAGTVTAFY+
Sbjct:   66 GCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYM 100          
BLAST of EY714275 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.135e-19
Identity = 46/66 (69.70%), Postives = 53/66 (80.30%), Query Frame = 3
Query:  672 MNSDTEYVRDELDFEFLGNRNGQPYTVQTNIYADGKSDRVQRVNLWFDPAADI-TFTLSLEHHHIV 866
            MNSDT+ VRDELDFEFLGNR+GQPYTVQTN++A GK DR QRVNLWFDP+ D   + +S  H  IV
Sbjct:   99 MNSDTDSVRDELDFEFLGNRSGQPYTVQTNVFAHGKGDREQRVNLWFDPSRDFHEYAISWNHLRIV 164          

HSP 2 Score: 72.0182 bits (175), Expect = 5.136e-12
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 1
Query:  415 LKRKAFLGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYV 540
            LK     GCGFASK+QYLFGRVSMKIKL+PGDSAGTVTAFY+
Sbjct:   58 LKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYM 99          
BLAST of EY714275 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.074e-13
Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 3
Query:  696 RDELDFEFLGNRNGQPYTVQTNIYADGKSDRVQRVNLWFDPAADI-TFTLSLEHHHIV 866
            RDE+DFEFLGN NGQPY +QTN+YA+G  +R +R++LWFDPA D  T+++    H IV
Sbjct:  109 RDEIDFEFLGNVNGQPYILQTNVYAEGLDNREERIHLWFDPAKDFHTYSILWNIHQIV 166          
BLAST of EY714275 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 6.033e-13
Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 3
Query:  699 DELDFEFLGNRNGQPYTVQTNIYADGKSDRVQRVNLWFDPAADI-TFTLSLEHHHIV 866
            DE+DFEFLGN  G PYT+ TN+Y  GK DR Q+ +LWFDP AD  T+++    HHIV
Sbjct:  103 DEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNPHHIV 159          
BLAST of EY714275 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.107e-12
Identity = 31/58 (53.45%), Postives = 42/58 (72.41%), Query Frame = 3
Query:  696 RDELDFEFLGNRNGQPYTVQTNIYADGKSDRVQRVNLWFDPAADI-TFTLSLEHHHIV 866
            RDE+DFEFLGNR GQPY +QTN+Y +G  +R  R +LWFDP  D  T+++   +H +V
Sbjct:  100 RDEIDFEFLGNRTGQPYIIQTNVYKNGTGNREMRHSLWFDPTKDYHTYSILWNNHQLV 157          
BLAST of EY714275 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.712e-12
Identity = 30/47 (63.83%), Postives = 35/47 (74.47%), Query Frame = 3
Query:  678 SDTEYVRDELDFEFLGNRNGQPYTVQTNIYADGKSDRVQRVNLWFDP 818
            S T    DE+DFEFLGNR GQPY +QTN++  GK DR QR+ LWFDP
Sbjct:   97 SSTNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDP 143          
BLAST of EY714275 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.535e-11
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 3
Query:  699 DELDFEFLGNRNGQPYTVQTNIYADGKSDRVQRVNLWFDPAAD 827
            DE+DFEFLGNR GQPY +QTN++  GK DR QR+ LWFDP  +
Sbjct:  106 DEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKE 148          
BLAST of EY714275 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 2.755e-11
Identity = 29/65 (44.62%), Postives = 41/65 (63.08%), Query Frame = 3
Query:  639 FYLDS*LIFQKMNSDTEYVRDELDFEFLGNRNGQPYTVQTNIYADGKS--DRVQRVNLWFDPAAD 827
            FYL +  +++K +       DE+DFEFLGN  G+ + +QTNIY +G +   R +R NLWFDP  D
Sbjct:   94 FYLSNGDLYEKNH-------DEIDFEFLGNIRGREWRIQTNIYGNGSTHLGREERYNLWFDPTED 151          

HSP 2 Score: 32.3426 bits (72), Expect = 2.755e-11
Identity = 18/35 (51.43%), Postives = 19/35 (54.29%), Query Frame = 1
Query:  436 GCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYV 540
            G GF S   YL G  S  IKL    SAG V AFY+
Sbjct:   62 GSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFYL 96          
The following BLAST results are available for this feature:
BLAST of EY714275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
XTH5_ARATH1.563e-2153.97Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT4.478e-2155.56Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH6_ARATH1.341e-2072.73Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH1.135e-1969.70Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH10_ARATH2.074e-1358.62Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH25_ARATH6.033e-1357.89Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ARATH5.107e-1253.45Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN8.712e-1263.83Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_SOYBN2.535e-1165.12Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH28_ARATH2.755e-1144.62Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-040-E07-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY714275 ID=EY714275; Name=EY714275; organism=Citrus sinensis; type=EST; length=895bp
CCACGCGTCCGACAACATATAATTAAAGTTCTCTTTCTAATTAGTAACAG
ATAATATTTTATTGTACGGCTTGTTTTACAGCTATGGCTATCCTAAGAAA
TGCAATAGCATTATTTGTGTTGCTTTACTGTCTTGTATCCTGCTCTTGCG
TTTTAGGGCGACCGGCTACTTTTCTTGAGGATTTTAAAGTCACATGGTCC
GATGCCCATCTCAGGCAAATCGAGGGAGGGAGGGCCATCCAGCTAGTTCT
AGACCAAAATTCAGGTGGGGTTCCAATTATGTTTTATATCTCAAGTAAAT
TTTAATATGGGCTTTCTAGCAACTTTATTTCTTTTGTTCATCGTGCACAT
GATTGATCAACGAATATAATTACTATGTTCCAATTATGCATATGATTGAT
CATCGTGCTACATACTAAAAAGAAAAGCATTTTTAGGATGTGGGTTTGCT
TCCAAAAGGCAGTACTTGTTCGGGCGTGTAAGCATGAAGATCAAGCTCGT
TCCTGGAGACTCTGCTGGAACTGTCACTGCATTTTATGTGTGTTAGTTAA
CTGTGTATAGTTAGCGTTTAATTTATTGTGCAATTCTCTGTATTCAAAGT
TGAAATTTTGGCACATGAAAGATACTAACTTTTAATTATTTTATTTGGAT
TCTTAATTAATTTTTCAAAAGATGAATTCCGACACCGAATATGTGAGAGA
CGAGCTTGATTTTGAGTTCCTGGGAAACCGAAACGGTCAGCCTTACACGG
TCCAGACCAATATCTATGCAGATGGAAAAAGCGATAGAGTACAGAGAGTG
AACCTCTGGTTTGACCCTGCTGCAGATATCACCTTTACACTATCTCTGGA
ACATCACCATATTGTGGAAGCTGGTATCATTGACTCCTCTCTCTC
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