FC922812

Overview
NameFC922812
Unique NameFC922812
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length447
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC922812 vs. ExPASy Swiss-Prot
Match: GLR28_ARATH (Glutamate receptor 2.8 OS=Arabidopsis thaliana GN=GLR2.8 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.071e-11
Identity = 34/66 (51.52%), Postives = 42/66 (63.64%), Query Frame = 1 
Query:  250 CNLFLISHADFLLFGDLQVFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFNKHSSCPDASTVLSS 447
            C+ + I    F   G    FP +SPL  DVSKAILNVT+GD+M+ IE+ WF K + CPD  T LSS
Sbjct:  744 CSKYAIVEPTFKTAGFGFAFPRNSPLTGDVSKAILNVTQGDEMQHIENKWFMKQNDCPDPKTALSS 809
The following BLAST results are available for this feature:
BLAST of FC922812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GLR28_ARATH1.071e-1151.52Glutamate receptor 2.8 OS=Arabidopsis thaliana GN=... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM3AB05RM1 SLH Citrus sinensis cDNA clone KN0AAM3AB05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922812 ID=FC922812; Name=FC922812; organism=Citrus sinensis; type=EST; length=447bp
GGACAACATTGCTCCAAATATACCATGATTGAACCAAAATTTAAAACAGC
TGGGTTTGGTTTTGTAAGTTCTCGAACTTTCTTCTTGCGTCATGGTTTTT
AAGTTTAGTCCATAGCTATTTGTAATCAAATGTCTAACTACCAAGAATGG
ATGGATGGGTGGTTGATAAACATCAACTGCCAGTAAAAGAGGGCATTCGT
CAAACACTTAAGCTGTCGTGCTTTCTCAATTAAGCAAAAGCACATCAATT
GCAATCTTTTCTTAATTTCTCATGCTGATTTTCTTTTGTTTGGTGATTTG
CAGGTCTTCCCATTACATTCCCCTCTAGTACATGATGTTTCAAAGGCAAT
CTTAAATGTGACTGAAGGGGATAAAATGAAAGAAATTGAAGATGCATGGT
TCAATAAACATTCTAGCTGCCCAGATGCAAGTACCGTTCTGTCTTCT
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