EY693224

Overview
NameEY693224
Unique NameEY693224
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length562
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: SSUB2_BURS3 (Aliphatic sulfonates import ATP-binding protein ssuB 2 OS=Burkholderia sp. (strain 383) GN=ssuB2 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.906e-18
Identity = 43/83 (51.81%), Postives = 56/83 (67.47%), Query Frame = -2
Query:   55 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAF 303
            YG  ++L    LQ+  GE+V ++GPSG GKS+LLR++AGL     GS+ L G  L+GP PR  V FQ+P LLPWLS+  NV F
Sbjct:   27 YGDRTILADVPLQVARGEIVCVVGPSGCGKSTLLRIVAGLDTDFRGSVKLGGIALDGPSPRAGVIFQEPRLLPWLSIADNVGF 109          
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: TAUB_ECO57 (Taurine import ATP-binding protein tauB OS=Escherichia coli O157:H7 GN=tauB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.004e-17
Identity = 43/88 (48.86%), Postives = 58/88 (65.91%), Query Frame = -2
Query:   40 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFA 303
            YGG  VLE  +L L+ GE++ +LGPSG GK++LL ++AG    Q GSI L G+ + GP     V FQ+  LLPW +++ NVAFGL  A
Sbjct:   11 YGGKPVLEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA 98          
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: SSUB2_BURCH (Aliphatic sulfonates import ATP-binding protein ssuB 2 OS=Burkholderia cenocepacia (strain HI2424) GN=ssuB2 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.004e-17
Identity = 43/83 (51.81%), Postives = 55/83 (66.27%), Query Frame = -2
Query:   55 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAF 303
            YG  ++L    LQ+  GE+V ++GPSG GKS+LLR++AGL     GS+ L G  L GP  RV V FQ+P LLPWLS+  NV F
Sbjct:   27 YGDRTILSDIALQVARGEIVCVVGPSGCGKSTLLRIVAGLDPDFRGSVTLDGSALAGPSARVGVIFQEPRLLPWLSIADNVGF 109          
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: SSUB2_BURCA (Aliphatic sulfonates import ATP-binding protein ssuB 2 OS=Burkholderia cenocepacia (strain AU 1054) GN=ssuB2 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.004e-17
Identity = 43/83 (51.81%), Postives = 55/83 (66.27%), Query Frame = -2
Query:   55 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAF 303
            YG  ++L    LQ+  GE+V ++GPSG GKS+LLR++AGL     GS+ L G  L GP  RV V FQ+P LLPWLS+  NV F
Sbjct:   27 YGDRTILSDIALQVARGEIVCVVGPSGCGKSTLLRIVAGLDPDFRGSVTLDGSALAGPSARVGVIFQEPRLLPWLSIADNVGF 109          
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: SSUB_RALSO (Aliphatic sulfonates import ATP-binding protein ssuB OS=Ralstonia solanacearum GN=ssuB PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.924e-17
Identity = 51/111 (45.95%), Postives = 64/111 (57.66%), Query Frame = -2
Query:   49 AVAHRVEPSGQSMSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL 381
            A   RV P G ++   + HA      YG   VL G DL++ PGE V+I+G SG GKS+LLR++AGL+   GGS+H  G    G H    V FQD  LLPW  +  NVA GL
Sbjct:    9 AALERVAPRGTALR--IAHA---VKRYGEREVLYGIDLEIAPGEFVAIVGRSGCGKSTLLRLIAGLEGIDGGSLHRDGAAGGGLHDDARVMFQDARLLPWKRVLDNVALGL 114          
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: TAUB_PSEE4 (Taurine import ATP-binding protein tauB OS=Pseudomonas entomophila (strain L48) GN=tauB PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.125e-17
Identity = 50/111 (45.05%), Postives = 64/111 (57.66%), Query Frame = -2
Query:   10 AVLHAQGICLGYGGNS--VLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARQPHLSPEER 336
            A+L  + I   Y G S  VL   +L L P +++  LGPSG GK+SLL ++AG  AP GG I L G P+ GP     V FQD +LLPW  +  NVAFGL+ A  P    E +
Sbjct:    2 ALLELERISAQYPGASTPVLADINLSLGPRQLLVALGPSGSGKTSLLNLIAGFVAPSGGRITLDGAPVQGPGAERGVVFQDDALLPWQDVLANVAFGLELAGVPRAQREAK 112          
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: SSUB1_XANAC (Aliphatic sulfonates import ATP-binding protein ssuB 1 OS=Xanthomonas axonopodis pv. citri GN=ssuB1 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.125e-17
Identity = 51/114 (44.74%), Postives = 65/114 (57.02%), Query Frame = -2
Query:    7 SMSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARQPHLSPEERR 348
            S S   LH  G    +G   VL   DLQL PGE+VS++G SG GKS+LLR+LAGL+    G + L G  + G   ++   FQ+P LLPWL +  NVA    FA +  LSP   R
Sbjct:    2 SSSGLQLHIAG--KRFGTRQVLRDIDLQLAPGEIVSLIGASGCGKSTLLRILAGLERDYAGEVALDGARVRGVDRQIGFIFQEPRLLPWLDVAANVA----FADEADLSPAAAR 109          
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: TAUB_PSEPK (Taurine import ATP-binding protein tauB OS=Pseudomonas putida (strain KT2440) GN=tauB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.693e-17
Identity = 50/111 (45.05%), Postives = 65/111 (58.56%), Query Frame = -2
Query:   10 AVLHAQGICLGYGGNS--VLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARQPHLSPEER 336
            A+L  + I   Y G S  VL   +L L P +++  LGPSG GK+SLL ++AG  AP GG I L G P+ GP     V FQD +LLPW ++  NVAFGL+ A  P    E +
Sbjct:    2 ALLELERISAQYPGASTPVLADINLSLGPRQLLVALGPSGSGKTSLLNLIAGFVAPSGGHITLDGVPVQGPGAERGVVFQDDALLPWQNVLGNVAFGLELAGVPRAQREAK 112          
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: TAUB_SHISS (Taurine import ATP-binding protein tauB OS=Shigella sonnei (strain Ss046) GN=tauB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.741e-17
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = -2
Query:   40 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFA 303
            YGG   LE  +L L+ GE++ +LGPSG GK++LL ++AG    Q GSI L G+ + GP     V FQ+  LLPW +++ NVAFGL  A
Sbjct:   11 YGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA 98          
BLAST of EY693224 vs. ExPASy Swiss-Prot
Match: TAUB_SHIFL (Taurine import ATP-binding protein tauB OS=Shigella flexneri GN=tauB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.741e-17
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = -2
Query:   40 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKSSLLRVLAGLQAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFA 303
            YGG   LE  +L L+ GE++ +LGPSG GK++LL ++AG    Q GSI L G+ + GP     V FQ+  LLPW +++ NVAFGL  A
Sbjct:   11 YGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA 98          
The following BLAST results are available for this feature:
BLAST of EY693224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 303
Match NameE-valueIdentityDescription
SSUB2_BURS37.906e-1851.81Aliphatic sulfonates import ATP-binding protein ss... [more]
TAUB_ECO573.004e-1748.86Taurine import ATP-binding protein tauB OS=Escheri... [more]
SSUB2_BURCH3.004e-1751.81Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB2_BURCA3.004e-1751.81Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB_RALSO3.924e-1745.95Aliphatic sulfonates import ATP-binding protein ss... [more]
TAUB_PSEE45.125e-1745.05Taurine import ATP-binding protein tauB OS=Pseudom... [more]
SSUB1_XANAC5.125e-1744.74Aliphatic sulfonates import ATP-binding protein ss... [more]
TAUB_PSEPK6.693e-1745.05Taurine import ATP-binding protein tauB OS=Pseudom... [more]
TAUB_SHISS8.741e-1747.73Taurine import ATP-binding protein tauB OS=Shigell... [more]
TAUB_SHIFL8.741e-1747.73Taurine import ATP-binding protein tauB OS=Shigell... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-C08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693224 ID=EY693224; Name=EY693224; organism=Citrus sinensis; type=EST; length=562bp
CCGGTTGCGTCGTTCTTCAGGACTGAGGTGCGGTTGGCGGGCAAAGTCCA
GGCCGAAGGCGACGTTCTTTTCCAGGCTCAACCACGGCAACAGGCTGGGG
TCCTGGAACGCCACCGCCACCCGCGGATGCGGGCCATTCAACGGCTCGCC
CAGCAGGTGAATGCTGCCGCCCTGGGGCGCCTGCAAACCGGCAAGCACCC
GCAGCAGGCTGGACTTGCCAACGCCGCTGGGGCCGAGGATCGACACCACT
TCGCCGGGCTGCAATTGCAGGTCGAACCCTTCCAGCACCGAGTTGCCCCC
ATAGCCCAGGCAAATTCCCTGGGCATGCAGTACCGCCTGGCTCATAGATT
GGCCTGACGGTTCAACTCGGTGCGCAACTGCACCAAGCTCGGGGTCACGA
TCGGCACAAACGCCGACTCGCGCCAACGCCGGGCGAAACCGCTGCCGTGG
GCAGTCAGGTAGGCCTTGCCACCGCTGGCTTGCAGCTCCAGTTGGACGGC
GCTGGCGGCAATTTCCGCGAGAGCAATGCGCAGGCGGAACAACGGTACCG
GCTCGGTCCCGA
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