EY693222

Overview
NameEY693222
Unique NameEY693222
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length947
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693222 vs. ExPASy Swiss-Prot
Match: PNO1_NEMVE (RNA-binding protein pno1 OS=Nematostella vectensis GN=pno1 PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.761e-66
Identity = 119/196 (60.71%), Postives = 159/196 (81.12%), Query Frame = 1
Query:  136 KPLFEPLKAHEMSDGRVQFRKVNVPPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILXSPAGKVYSKLKAVTARLAERF 723
            +P F P+KA +++ G+ + RK+ VP HRY+PLK+ WM+I+TP+ E +K+ IR NL +R VE++   +T DI  +QK ADFV AF+LGF+V DA+AL+RLD+L++ESFEI DVK L+G+HLSRAIGR++GKGGKTKF IEN TKTRIV+A++KIHILGSF NIKIAR ++C+LIL SP  KVY  ++AV +R AERF
Sbjct:   43 RPSFPPVKAQKLAGGKSETRKIPVPSHRYTPLKENWMKIFTPVVEHLKLQIRFNLGSRHVEIRASKETSDIGAVQKAADFVQAFILGFEVEDALALIRLDDLFLESFEIADVKPLKGDHLSRAIGRVAGKGGKTKFTIENVTKTRIVLAETKIHILGSFQNIKIARTAICNLILGSPPSKVYGNMRAVASRSAERF 238          
BLAST of EY693222 vs. ExPASy Swiss-Prot
Match: PNO1_DROME (RNA-binding protein pno1 OS=Drosophila melanogaster GN=l(1)G0004 PE=1 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.761e-66
Identity = 121/180 (67.22%), Postives = 154/180 (85.56%), Query Frame = 1
Query:  181 RVQFRKVNVPPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILXSPAGKVYSKLKAVTARLAER 720
            R + RKV+VPPHRYS LK+ WM+I+TP+ E MK+ IR N+KAR+VEL+   +TPDI+NLQ+ ADFV AF+ GF+V DA+ALLRL++L++ESFEIKDVKTLRG+H SRAIGRL+GKGG+TKF IEN TKTRIV+ADSKIHILGS+ NI++AR ++C+LIL SP  KVY  L+AV +RL+ER
Sbjct:   60 RSELRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMKARQVELRVGPETPDIANLQRGADFVRAFLCGFEVDDALALLRLEDLFVESFEIKDVKTLRGDHQSRAIGRLAGKGGRTKFTIENVTKTRIVLADSKIHILGSYQNIQLARRAVCNLILGSPPSKVYGNLRAVASRLSER 239          
BLAST of EY693222 vs. ExPASy Swiss-Prot
Match: PNO1_CHICK (RNA-binding protein PNO1 OS=Gallus gallus GN=PNO1 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 6.691e-66
Identity = 124/203 (61.08%), Postives = 160/203 (78.82%), Query Frame = 1
Query:  118 SGSLPPK-PLFEPLKAHEMSDGRVQFRKVNVPPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILXSPAGKVYSKLKAVTARLAERF 723
            +G  P K P F PL A  +  G+ + RKV VP +RY+PLK+ WM+I+TPI E +++ IR NLK R VE+KT ++T D+S L K ADFV AF+LGF V DA+AL+RLD+L++ESFE+ DVK L+G+HLSRAIGR++GKGGKTKF IEN T+TRIV+ADSKIHILGSF NIK+AR ++C+LIL SP  KVY  ++AV +R AERF
Sbjct:   40 AGPQPSKRPAFPPLPAAALGVGKGEVRKVPVPANRYTPLKENWMKIFTPIVEHLQLQIRFNLKTRNVEIKTCSETKDLSALTKAADFVKAFILGFQVEDALALIRLDDLFLESFEVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIVLADSKIHILGSFQNIKMARTAICNLILGSPPSKVYGNIRAVASRAAERF 242          
BLAST of EY693222 vs. ExPASy Swiss-Prot
Match: PNO1_DROPS (RNA-binding protein pno1 OS=Drosophila pseudoobscura pseudoobscura GN=l(1)G0004 PE=3 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 8.739e-66
Identity = 119/178 (66.85%), Postives = 153/178 (85.96%), Query Frame = 1
Query:  187 QFRKVNVPPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILXSPAGKVYSKLKAVTARLAER 720
            + RKV+VPPHRYS LK+ WM+I+TP+ E MK+ IR N+KAR+VEL+   +TPDI+NLQK ADFV AF+ GF+V DA+ALLRL++L++E+FEIKDVKTLRG+H SRAIGRL+GKGG+TKF IEN TKTRIV+ADSKIHILGS+ NI++AR ++C+LIL SP  KVY  L++V +RL+ER
Sbjct:   60 ELRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMKARQVELRVGPETPDIANLQKGADFVKAFLCGFEVDDALALLRLEDLFVETFEIKDVKTLRGDHQSRAIGRLAGKGGRTKFTIENVTKTRIVLADSKIHILGSYQNIQLARRAICNLILGSPPSKVYGNLRSVASRLSER 237          
BLAST of EY693222 vs. ExPASy Swiss-Prot
Match: PNO1_DANRE (RNA-binding protein PNO1 OS=Danio rerio GN=pno1 PE=2 SV=2)

HSP 1 Score: 248.054 bits (632), Expect = 5.665e-65
Identity = 122/209 (58.37%), Postives = 159/209 (76.08%), Query Frame = 1
Query:  100 SQLQNESGSLPPK-PLFEPLKAHEMSDGRVQFRKVNVPPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILXSPAGKVYSKLKAVTARLAERF 723
            +Q +  S S P K P F  L   ++  G  + RKV VP HRY+PLK+ W++I+TPI E +++ +R NLK R+VE+KT  +T DI  L + ADFV AF+LGF V DA+AL+RLDEL++E+F++ DVK L+G+HLSRAIGR++GKGGKTKF IEN TKTRIV+AD+KIHILGSF NIK+AR ++C+LIL SP  KVY  L+AV  R AERF
Sbjct:   44 TQTEESSSSAPVKRPHFPALSGDQLGGGVDEMRKVPVPSHRYTPLKENWLKIFTPIVENLQLQVRFNLKTRQVEIKTCKETQDIGALTRAADFVKAFVLGFQVEDALALIRLDELFLETFDVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTKTRIVLADTKIHILGSFQNIKMARTAICNLILGSPPSKVYGNLRAVATRSAERF 252          
BLAST of EY693222 vs. ExPASy Swiss-Prot
Match: PNO1_XENLA (RNA-binding protein PNO1 OS=Xenopus laevis GN=pno1 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 9.662e-65
Identity = 118/204 (57.84%), Postives = 158/204 (77.45%), Query Frame = 1
Query:  115 ESGSLPPK-PLFEPLKAHEMSDGRVQFRKVNVPPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILXSPAGKVYSKLKAVTARLAERF 723
            + G  P K P F P+   ++   + + RK+ VP HRY+PLK+ WM+I+TPI E +++ +R NLK+R VE+KT  +T D+  L K ADFV AF+LGF V DA+AL+RLD+L++ESFE+ DVK L+G+HLSRAIGR++GKGGKTKF IEN TKTRIV+ADSKIHI+GSF NIK+AR ++C+LIL SP  KVY  ++AV +R A+RF
Sbjct:   33 DMGEQPSKRPDFPPISGDKLMGDKDEMRKIPVPSHRYTPLKENWMKIFTPIVEHLQLQVRFNLKSRNVEIKTCKETTDVGALTKAADFVRAFILGFQVEDALALVRLDDLFLESFEVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTKTRIVLADSKIHIMGSFQNIKMARTAICNLILGSPPSKVYGNIRAVASRAADRF 236          
BLAST of EY693222 vs. ExPASy Swiss-Prot
Match: PNO1_RAT (RNA-binding protein PNO1 OS=Rattus norvegicus GN=Pno1 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.648e-64
Identity = 117/207 (56.52%), Postives = 159/207 (76.81%), Query Frame = 1
Query:  103 QLQNESGSLPPKPLFEPLKAHEMSDGRVQFRKVNVPPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILXSPAGKVYSKLKAVTARLAERF 723
            ++  E      +P+F PL   ++  G+ + RK+ VP +RY+PLK+ WM+I+TPI E + + IR NLK+R VE++T  DT D+S L K ADFV AF+LGF V DA+AL+RLD+L++ESFEI DVK L+G+HLSRAIGR++GKGGKTKF IEN T+TRIV+AD K+HILGSF NIK+AR ++C+LIL +P  KVY  ++AV +R A+RF
Sbjct:   42 RMDTEEARPAKRPVFPPLSGDQLLTGKEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKDTKDVSALTKAADFVKAFVLGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRSADRF 248          
BLAST of EY693222 vs. ExPASy Swiss-Prot
Match: PNO1_XENTR (RNA-binding protein PNO1 OS=Xenopus tropicalis GN=pno1 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 2.153e-64
Identity = 118/204 (57.84%), Postives = 157/204 (76.96%), Query Frame = 1
Query:  115 ESGSLPPK-PLFEPLKAHEMSDGRVQFRKVNVPPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILXSPAGKVYSKLKAVTARLAERF 723
            ++G  P K P F P+   ++   + + RKV VP HRY+PLK+ WM+I+TPI E +++ +R NLK R VE+KT  +T D+  L K  DFV AF+LGF V DA+AL+RLD+L++ESFE+ DVK L+G+HLSRAIGR++GKGGKTKF IEN T+TRIV+ADSKIHILGSF NIK+AR ++C+LIL SP  KVY  ++AV +R A+RF
Sbjct:   33 DTGEQPSKRPDFPPISGDKLMGDKDEMRKVPVPSHRYTPLKENWMKIFTPIVEHLQLQVRFNLKTRNVEIKTCKETTDVGALTKATDFVRAFILGFQVEDALALVRLDDLFLESFEVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIVLADSKIHILGSFQNIKMARTAICNLILGSPPSKVYGNIRAVASRAADRF 236          
BLAST of EY693222 vs. ExPASy Swiss-Prot
Match: PNO1_CANAL (Pre-rRNA-processing protein PNO1 OS=Candida albicans GN=PNO1 PE=3 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.811e-64
Identity = 129/212 (60.85%), Postives = 160/212 (75.47%), Query Frame = 1
Query:   88 ETVPSQLQNESGSLPPKPLFEPLKAHEMSDGRVQFRKVNVPPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILXSPAGKVYSKLKAVTARLAERF 723
            ET   QL +ESG    KP F       M   +++ RKV VPPHR +PLK +W +IY P+ E +K+ +RMNLK + VEL+T   T D+  LQK ADFV AF LGFDV DAIALLRLD+LYIE+FEIKDVKTL G+HLSRAIGR++GK GKTKFAIENAT+TRIV+ADSKIHILG F +I++AR+++ SLIL SP GKVY  L+ V +R+ ER+
Sbjct:   71 ETTELQL-DESG----KPKFSAASKSNMKV-KLESRKVAVPPHRMTPLKNVWSKIYPPLVEHLKLQVRMNLKTKTVELRTNKYTTDVGALQKGADFVKAFTLGFDVDDAIALLRLDDLYIETFEIKDVKTLTGDHLSRAIGRIAGKDGKTKFAIENATRTRIVLADSKIHILGGFTHIRMAREAVVSLILGSPPGKVYGNLRTVASRMKERY 276          
BLAST of EY693222 vs. ExPASy Swiss-Prot
Match: PNO1_ORYLA (RNA-binding protein PNO1 OS=Oryzias latipes GN=pno1 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.795e-64
Identity = 118/196 (60.20%), Postives = 156/196 (79.59%), Query Frame = 1
Query:  136 KPLFEPLKAHEMSDGRVQFRKVNVPPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILXSPAGKVYSKLKAVTARLAERF 723
            +P F P+ A ++  G  + RKV VP HRY+PLK+ W++I+TPI E +++ +R NLK R VE+KT  +T DI+ L K ADF+ AF+LGF V DA+AL+RLDEL++ESF++ DVK L+G+HLSRAIGR++GKGGKTKF IEN TKTRIV+AD+KIHILGSF NIK+AR ++C+LIL SP  KVY  ++AV +R AERF
Sbjct:   49 RPHFPPISADKLR-GPDEMRKVAVPAHRYTPLKENWLKIFTPIVENLQLQVRFNLKTRNVEIKTCKETQDIAALTKAADFIKAFVLGFQVDDAMALIRLDELFLESFDVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTKTRIVLADTKIHILGSFQNIKMARTAICNLILGSPPSKVYGNIRAVASRTAERF 243          
The following BLAST results are available for this feature:
BLAST of EY693222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
PNO1_NEMVE1.761e-6660.71RNA-binding protein pno1 OS=Nematostella vectensis... [more]
PNO1_DROME1.761e-6667.22RNA-binding protein pno1 OS=Drosophila melanogaste... [more]
PNO1_CHICK6.691e-6661.08RNA-binding protein PNO1 OS=Gallus gallus GN=PNO1 ... [more]
PNO1_DROPS8.739e-6666.85RNA-binding protein pno1 OS=Drosophila pseudoobscu... [more]
PNO1_DANRE5.665e-6558.37RNA-binding protein PNO1 OS=Danio rerio GN=pno1 PE... [more]
PNO1_XENLA9.662e-6557.84RNA-binding protein PNO1 OS=Xenopus laevis GN=pno1... [more]
PNO1_RAT1.648e-6456.52RNA-binding protein PNO1 OS=Rattus norvegicus GN=P... [more]
PNO1_XENTR2.153e-6457.84RNA-binding protein PNO1 OS=Xenopus tropicalis GN=... [more]
PNO1_CANAL2.811e-6460.85Pre-rRNA-processing protein PNO1 OS=Candida albica... [more]
PNO1_ORYLA4.795e-6460.20RNA-binding protein PNO1 OS=Oryzias latipes GN=pno... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-C06-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693222 ID=EY693222; Name=EY693222; organism=Citrus sinensis; type=EST; length=947bp
CCACGCGTCCGGACATAGACATCACGGAGAGAAGACAGCTCGTATCTGAT
CTTGTGGTTGTTCACAATGCAGTCTTCCATGGACGTTGAAACAGTTCCAT
CTCAACTGCAAAATGAATCCGGGTCTCTGCCACCAAAGCCCCTGTTTGAG
CCATTGAAGGCTCATGAAATGTCTGATGGTCGAGTTCAGTTTCGGAAGGT
CAATGTTCCACCTCATCGGTACTCGCCTCTCAAGAAAATATGGATGGAAA
TCTACACTCCAATTTATGAACAGATGAAGATTGACATCCGTATGAACCTC
AAGGCTCGTAGGGTTGAATTGAAGACTAGAGCAGACACACCAGACATAAG
TAATTTACAGAAGTGTGCGGATTTTGTTCATGCATTCATGCTTGGTTTTG
ATGTTATCGATGCCATTGCACTTTTGCGTTTGGATGAGCTGTATATAGAA
TCTTTTGAGATCAAGGATGTTAAGACACTAAGAGGTGAGCATTTGTCACG
TGCCATAGGAAGACTATCTGGTAAAGGTGGCAAAACAAAGTTTGCTATCG
AGAATGCCACAAAAACAAGGATTGTGATTGCAGATTCGAAAATTCACATA
CTAGGATCTTTTGCCAATATTAAAATTGCAAGGGATTCCCTTTGTAGTCT
CATCTTANGATCTCCTGCTGGAAAGGTGTATTCGAAACTTAAAGCAGTGA
CTGCCAGATTGGCAGAAAGGTTTTGATCATTCTTATTTTTTTGTATGCAT
GCAAGGTTTCTCTATGGTGAGTATATCTAGGAGAGTGTAACCTGGTAGNT
AGGGATTTTGTCGTCCGAGTATCAACCAGGTACATTAAAAATAGTAGGAT
TATCATTATAAGTTTTTATAAATTTGNATGGTNGAAATTGGTTCGGAATC
AATACTTTTCGGGCTGGGGGATCACTTTTTCCATGTCAACACTCTTT
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