EY693221

Overview
NameEY693221
Unique NameEY693221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_NOSP7 (Translation initiation factor IF-3 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=infC PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.089e-28
Identity = 67/157 (42.68%), Postives = 97/157 (61.78%), Query Frame = 1
Query:  307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDV---GELASEENKNFRDRNIFI 768
            IR   +R+ID     +GI+P  EA+Q+AE+ ELDLV++S  ADPPV R+MDY KY++E              +  D+KE+KM Y I++HDY+VR+K A +FLKDGDKVK  V  +GR  +  ++A +L++R   D+   GEL     K  R+  + I
Sbjct:   19 IRFPKIRVIDTDGAQLGIMPPQEALQLAEEKELDLVLISDKADPPVCRIMDYGKYKFE--QEKKAREARKKQHTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAEDLLKRMATDLEPFGELQQAPKKEGRNMMMLI 173          
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_ANAVT (Translation initiation factor IF-3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=infC PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.793e-27
Identity = 65/157 (41.40%), Postives = 97/157 (61.78%), Query Frame = 1
Query:  307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDV---GELASEENKNFRDRNIFI 768
            IR   +R+ID   + +GI+   EA+Q+AE+ ELDLV++S  ADPPV R+MDY KY++E              +  D+KE+KM Y I++HDY+VR+K A +FLKDGDKVK  V  +GR  +  ++A +L++R   D+   GE+     K  R+  + I
Sbjct:   19 IRFPKIRVIDTDGSQLGILTPQEALQLAEEKELDLVLLSDKADPPVCRIMDYGKYKFE--QEKKAREARKKQHTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAEDLLKRMATDLEPFGEVQQAPKKEGRNMMMLI 173          
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_ANASP (Translation initiation factor IF-3 OS=Anabaena sp. (strain PCC 7120) GN=infC PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.793e-27
Identity = 65/157 (41.40%), Postives = 97/157 (61.78%), Query Frame = 1
Query:  307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDV---GELASEENKNFRDRNIFI 768
            IR   +R+ID   + +GI+   EA+Q+AE+ ELDLV++S  ADPPV R+MDY KY++E              +  D+KE+KM Y I++HDY+VR+K A +FLKDGDKVK  V  +GR  +  ++A +L++R   D+   GE+     K  R+  + I
Sbjct:   19 IRFPKIRVIDTDGSQLGILTPQEALQLAEEKELDLVLLSDKADPPVCRIMDYGKYKFE--QEKKAREARKKQHTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAEDLLKRMATDLEPFGEVQQAPKKEGRNMMMLI 173          
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_SYNSC (Translation initiation factor IF-3 OS=Synechococcus sp. (strain CC9605) GN=infC PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.959e-26
Identity = 68/178 (38.20%), Postives = 102/178 (57.30%), Query Frame = 1
Query:  301 DGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF*VQKGPPTEGSEHRRGKKNK 831
            D I    +R++D+    +G++ + EA+ +A D ELDLV+VS  ADPPV R+MDY K+++E           S  ++ ++KE+KM Y IDQHDY VR+  A++FLK GDKVK  V  +GR  +   +A  L+RR   D+ E A  +    R+ RN+ +F   +  P    E +    NK
Sbjct:   21 DRINYPQLRVVDSDGAQLGVISREEALDVARDRELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAETLLRRMAKDLEEKAEIQQAPKREGRNMIMFLTPRKTPLVKKEEKEQAANK 196          
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_MICAN (Translation initiation factor IF-3 OS=Microcystis aeruginosa (strain NIES-843) GN=infC PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.558e-26
Identity = 63/158 (39.87%), Postives = 99/158 (62.66%), Query Frame = 1
Query:  253 RRQKEKDLEEEQAFDIDGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELA 726
            +R+  +DL +      + IR   +R+ID+  + +GI+  +EA+++AE+ ELDLV+VS  A PPV R+MDY KY++E              +  D+KE+KM Y ID+HDY+VR+  A++FLK GDKVK  +  +GR  +  N+A EL+ R   D+ ++A
Sbjct:    4 KRRTTRDLPQIN----ERIRFPEIRVIDSDGSQLGIITPAEALRVAEEKELDLVLVSETASPPVCRIMDYGKYKFEQEKKAREAKKKQ--HTADIKEVKMRYKIDEHDYNVRVNQAQRFLKAGDKVKATITFRGREIQHSNLAEELLARMAKDLQDVA 155          
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_CYAP8 (Translation initiation factor IF-3 OS=Cyanothece sp. (strain PCC 8801) GN=infC PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.558e-26
Identity = 67/174 (38.51%), Postives = 104/174 (59.77%), Query Frame = 1
Query:  253 RRQKEKDLEEEQAFDIDGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF 771
            +R+ ++DL +      + IR   +R+ID+  + VG++   EA+ +A++ ELDLV+VS  A PPV R+MDY KY++E              +  D+KE+KM Y I + DY+VR+  A++FLK GDKVK  V  +GR  +  N+A EL+ R   D+ ELA  +    R+ RN+ +F
Sbjct:    4 KRRPQRDLPKIN----ERIRFPEIRVIDSDGSQVGVITPKEALSLAQEKELDLVLVSETAKPPVCRIMDYGKYKFEQEKKAREAKKKQ--HTADVKEVKMRYKIGESDYNVRVNQAKRFLKSGDKVKATVTFRGREIQHANLAQELLERMAKDLEELAEIQQAPKREGRNMMMF 171          
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_SYNY3 (Translation initiation factor IF-3 OS=Synechocystis sp. (strain PCC 6803) GN=infC PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.341e-26
Identity = 67/174 (38.51%), Postives = 105/174 (60.34%), Query Frame = 1
Query:  253 RRQKEKDLEEEQAFDIDGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF 771
            +R+ ++DL +      + IR   +R+ID+    +GI+  +EA+++A++  LDLV+VS  ADPPV R+MDY KY++E              +  D+KE+KM Y ID+HDY VR+  A++FLK GDKVK  VN +GR  +  ++A EL+ R   D+   A  +    R+ RN+ +F
Sbjct:    4 KRRPQRDLPQIN----ERIRFPEIRVIDSDGAQLGIITPNEAMEIADERGLDLVLVSETADPPVCRIMDYGKYKFEQEKKAREAKKKQ--HTADVKEVKMRYKIDEHDYQVRINQAKRFLKAGDKVKATVNFRGREIQHAHLAKELLDRMATDLATEADIQQAPKREGRNMMMF 171          
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_AQUAE (Translation initiation factor IF-3 OS=Aquifex aeolicus GN=infC PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.722e-26
Identity = 58/155 (37.42%), Postives = 95/155 (61.29%), Query Frame = 1
Query:  307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIF 771
            IR+   RLID     +GIVP  EA+++AE+  LDLV ++P A PPV ++MDY K++YE              +++++K+++M   ID+HD  V+LK  R+FL++GDKVKV +  +GR N +  +  +L  R  N++ ++A  E +  ++ N  IF
Sbjct:   13 IRAKECRLIDENGQQIGIVPIEEALKIAEEKGLDLVEIAPQAKPPVCKIMDYGKFKYELKKKEREARKKQREHQIEVKDIRMKVRIDEHDLQVKLKHMREFLEEGDKVKVWLRFRGRENIYPELGKKLAERIINELSDIAEVEVQPKKEGNFMIF 167          
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_SYNPX (Translation initiation factor IF-3 OS=Synechococcus sp. (strain WH8102) GN=infC PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.270e-25
Identity = 66/178 (37.08%), Postives = 103/178 (57.87%), Query Frame = 1
Query:  301 DGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF*VQKGPPTEGSEHRRGKKNK 831
            D I    +R++D+  + +G++ + EA+++A++ ELDLV+VS  ADPPV R+MDY K+++E           S  ++ ++KE+KM Y IDQHDY VR+  A +FLK GDKVK  V  +GR  +   +A  L+RR   D+ E A  +    R+ RN+ +F   +  P    E +     K
Sbjct:   21 DRISYPQLRVVDSDGSQLGVISREEALEVAKERELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYDVRIGQAVRFLKAGDKVKCTVIFRGREIQHTALAETLLRRMAKDLEEKAEIQQAPKREGRNMIMFLTPRKTPLVKKEEKEAAPTK 196          
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_PROMM (Translation initiation factor IF-3 OS=Prochlorococcus marinus (strain MIT 9313) GN=infC PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.270e-25
Identity = 66/165 (40.00%), Postives = 99/165 (60.00%), Query Frame = 1
Query:  301 DGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF*VQKGPP 792
            D I    +R++DA    +G++ + EA+ +A+D ELDLV+VS  ADPPV R+MDY K+++E           S  ++ ++KE+KM Y IDQHDY+VR+  A +FLK GDKVK  V  +GR  +   +A  L+RR   D+ E A  +    R+ RN+ +F   +  P
Sbjct:   21 DRINYPKLRVVDADGTQLGVINREEALDVAKDRELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYNVRIGQAVRFLKAGDKVKCTVIFRGREIQHTALAETLLRRMAKDLEEQAEIQQAPKREGRNMIMFLTPRKTP 183          
The following BLAST results are available for this feature:
BLAST of EY693221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 297
Match NameE-valueIdentityDescription
IF3_NOSP76.089e-2842.68Translation initiation factor IF-3 OS=Nostoc punct... [more]
IF3_ANAVT8.793e-2741.40Translation initiation factor IF-3 OS=Anabaena var... [more]
IF3_ANASP8.793e-2741.40Translation initiation factor IF-3 OS=Anabaena sp.... [more]
IF3_SYNSC1.959e-2638.20Translation initiation factor IF-3 OS=Synechococcu... [more]
IF3_MICAN2.558e-2639.87Translation initiation factor IF-3 OS=Microcystis ... [more]
IF3_CYAP82.558e-2638.51Translation initiation factor IF-3 OS=Cyanothece s... [more]
IF3_SYNY33.341e-2638.51Translation initiation factor IF-3 OS=Synechocysti... [more]
IF3_AQUAE9.722e-2637.42Translation initiation factor IF-3 OS=Aquifex aeol... [more]
IF3_SYNPX1.270e-2537.08Translation initiation factor IF-3 OS=Synechococcu... [more]
IF3_PROMM1.270e-2540.00Translation initiation factor IF-3 OS=Prochlorococ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-C05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693221 ID=EY693221; Name=EY693221; organism=Citrus sinensis; type=EST; length=848bp
CCACGCGTCCGCCAACTCCCTTCTCCCTTGAAAACACCACTATGGCTGGT
CTCGCCAGCGCCTTTCACTTTTCTAAAACGACACCGTCGCTCTCTTCAAT
CGAGTCCAAGTTCTTCGGCCTCCATTTGTGTAACCTCAACCATTTCTTCC
TCATTTCTTTCTCGCCTTCTTCCCATCACCACAACGTTTCCATCACCGCC
AGATACGGCGNGCGGTGGCGGGCCCCGCTTCGCAGGCTCCGACTACTCCC
GCCGCCGCCAAAAGGAAAAAGATTTGGAAGAAGAGCAAGCCTTTGATATC
GATGGCATCAGGTCGAACACTGTGAGGCTTATTGATGCTCAGCAAAACAT
GGTTGGTATAGTTCCTAAGAGTGAAGCTATTCAAATGGCCGAGGATGCTG
AACTAGACCTGGTGATAGTTTCCCCAGATGCAGATCCTCCAGTTGTCAGA
GTAATGGATTACAATAAATATAGATATGAACAGCAAAAGAAGAAGAAAGG
GCAGCAGAAGAAAAGTGCAGCCAATCGGATGGATTTGAAGGAGCTTAAAA
TGGGTTATAATATTGACCAGCATGATTATTCTGTGCGTCTAAAAGCTGCA
AGGAAGTTTCTGAAAGACGGAGACAAGGTTAAGGTCATAGTGAACCCTCA
AGGGCGGGGAAATGAATTCAGAAATATTGCTATTGAGCTAATACGACGNT
TCCAGAATGATGTTGGGGAGCTTGCTAGTGAGGAGAACAAAAATTTCAGA
GATAGGAATATATTTATATTTTAGGTTCAAAAAGGCCCTCCTACAGAGGG
CTCAGAACACCGNAGAGGAAAGAAAAACAAGTGTAGAGGAAGCTCACT
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