EY693216

Overview
NameEY693216
Unique NameEY693216
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length752
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693216 vs. ExPASy Swiss-Prot
Match: EI24_DICDI (Protein EI24 homolog OS=Dictyostelium discoideum GN=DDB_G0284253 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.902e-17
Identity = 43/148 (29.05%), Postives = 83/148 (56.08%), Query Frame = 3
Query:   69 GVMIVTGEQVYSMLLLSFFFVEVNAIGFLPYIGKGFNFLLLSWMYAYYCFEYKWNF-SEVGLDKRLDFFESNWAFFAGFGSPCVLAYFFFSPLVAYGVMAILYPLFVLTATASGAEEVISSKRRSWKGAGFGRLPIFYVADALSMKVL 509
            G++    +++Y  LL     V    I F+PY     NF++++W+Y+++CF+YKW    +  L +R+ +FE++WA+  G+G       FFF  L+   + +ILYPLF++ + ++   ++++       G    ++PIFYV + +   +L
Sbjct:  139 GILSSFVDEIYRNLLFGVILVMSAIIAFIPYTNF-INFVIITWLYSFWCFDYKWILRGKWNLLQRIQYFETHWAYMFGYGLIFTTCSFFFPMLIGNAIFSILYPLFIILSISAKPTKMVNQ-----DGILPKQIPIFYVPEIIVNVIL 280          
BLAST of EY693216 vs. ExPASy Swiss-Prot
Match: EI24_RAT (Etoposide-induced protein 2.4 homolog OS=Rattus norvegicus GN=Ei24 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11
Identity = 36/123 (29.27%), Postives = 65/123 (52.85%), Query Frame = 3
Query:   39 EQKGRLPG-LGGVMIVTGEQVYSMLLLSFFFVEVNAIGFLPY--IGKGFNFLLLSWMYAYYCFEYKWNFSEVGLDKRLDFFESNWAFFAGFGSPCVLAYFFFSPLVAYG-VMAILYPLFVLTA 395
            E  GR P     V  +  + ++++LL + F ++   +   P   +G+  + L +S +Y+ YCFEY+W    + + +RL   E NW ++ GFG P        S  +  G + +IL+PLF+++A
Sbjct:  155 EVSGRKPHPFPSVSKIIADMLFNLLLQALFLIQGMFVSLFPIHLVGQLVSLLHMSLLYSLYCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPLFIISA 277          
BLAST of EY693216 vs. ExPASy Swiss-Prot
Match: EI24_MOUSE (Etoposide-induced protein 2.4 OS=Mus musculus GN=Ei24 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11
Identity = 36/123 (29.27%), Postives = 65/123 (52.85%), Query Frame = 3
Query:   39 EQKGRLPG-LGGVMIVTGEQVYSMLLLSFFFVEVNAIGFLPY--IGKGFNFLLLSWMYAYYCFEYKWNFSEVGLDKRLDFFESNWAFFAGFGSPCVLAYFFFSPLVAYG-VMAILYPLFVLTA 395
            E  GR P     V  +  + ++++LL + F ++   +   P   +G+  + L +S +Y+ YCFEY+W    + + +RL   E NW ++ GFG P        S  +  G + +IL+PLF+++A
Sbjct:  155 EVSGRKPHPFPSVSKIIADMLFNLLLQALFLIQGMFVSLFPIHLVGQLVSLLHMSLLYSLYCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPLFIISA 277          
BLAST of EY693216 vs. ExPASy Swiss-Prot
Match: EI24_HUMAN (Etoposide-induced protein 2.4 homolog OS=Homo sapiens GN=EI24 PE=1 SV=4)

HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11
Identity = 36/123 (29.27%), Postives = 65/123 (52.85%), Query Frame = 3
Query:   39 EQKGRLPG-LGGVMIVTGEQVYSMLLLSFFFVEVNAIGFLPY--IGKGFNFLLLSWMYAYYCFEYKWNFSEVGLDKRLDFFESNWAFFAGFGSPCVLAYFFFSPLVAYG-VMAILYPLFVLTA 395
            E  GR P     V  +  + ++++LL + F ++   +   P   +G+  + L +S +Y+ YCFEY+W    + + +RL   E NW ++ GFG P        S  +  G + +IL+PLF+++A
Sbjct:  155 EVSGRKPHPFPSVSKIIADMLFNLLLQALFLIQGMFVSLFPIHLVGQLVSLLHMSLLYSLYCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPLFIISA 277          
The following BLAST results are available for this feature:
BLAST of EY693216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
EI24_DICDI8.902e-1729.05Protein EI24 homolog OS=Dictyostelium discoideum G... [more]
EI24_RAT9.533e-1129.27Etoposide-induced protein 2.4 homolog OS=Rattus no... [more]
EI24_MOUSE9.533e-1129.27Etoposide-induced protein 2.4 OS=Mus musculus GN=E... [more]
EI24_HUMAN9.533e-1129.27Etoposide-induced protein 2.4 homolog OS=Homo sapi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-B12-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693216 ID=EY693216; Name=EY693216; organism=Citrus sinensis; type=EST; length=752bp
CCACGCGTCCGAGACAAGATGATACCTTACAAAATACAGAACAGAAGGGA
AGGCTCCCTGGCCTAGGAGGGGTCATGATTGTAACAGGAGAGCAAGTGTA
CTCAATGCTTCTTTTGAGCTTCTTCTTTGTTGAGGTTAATGCTATCGGAT
TTCTACCCTACATTGGGAAGGGATTTAATTTCCTTCTTCTTTCCTGGATG
TATGCCTATTACTGTTTCGAGTACAAATGGAATTTTTCAGAAGTGGGTCT
GGACAAGAGGCTGGACTTCTTTGAATCTAACTGGGCCTTTTTTGCTGGTT
TTGGGAGCCCTTGTGTCTTGGCTTATTTCTTCTTCTCACCTCTGGTAGCC
TATGGGGTCATGGCCATACTCTATCCATTGTTTGTTCTTACTGCAACGGC
ATCAGGGGCGGAAGAAGTTATTTCTTCAAAAAGAAGATCATGGAAAGGTG
CTGGATTTGGGAGACTTCCGATATTTTATGTAGCAGACGCTCTATCGATG
AAGGTCTTGTCTTTCTTCTCCTTCGACTCTCAACAACAGATACAAGACGA
TAAGGCGCTCTAACAACTTCTGGCTTGAAGCTACACGATTTATTATCTGT
AAGTCAAGTACATATCAGGTTTAAATCAAATGCTGCAGAAATTCGTCGCA
TAAAATTTCATGCTGTTATCACTTATGCGATACAGATACATTGCAAGCTG
ATGCCATGAGAATTTCTGTAAAAATGAGAAAAAAAAATAAAAAAAAAACA
AA
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