EY693212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693212 vs. ExPASy Swiss-Prot
Match: CSTF1_RAT (Cleavage stimulation factor 50 kDa subunit OS=Rattus norvegicus GN=Cstf1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.728e-24 Identity = 51/128 (39.84%), Postives = 77/128 (60.16%), Query Frame = 3 Query: 15 DTKGSSKSFPKLETRHLSEHKNIARCARFSPDGRFIATGSADTSIKLFEVAKIK-------QMMLPDSTDGPVR--PVIRTFYDHIQPINDLDFHPQNTVLISGGKDHTIKFFDFSKATAKRAFRVIQ 371 D + S + ET +++ HK R A +S DG+ IATGSAD SIK+ + ++ ++M+ ++ + PVIRT YDH+ + L FHP +L SG +D+T+K FD+SK +AKRAF+ IQ Sbjct: 88 DVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQ 215 HSP 2 Score: 34.6538 bits (78), Expect = 2.728e-24 Identity = 13/22 (59.09%), Postives = 18/22 (81.82%), Query Frame = 1 Query: 475 QDTHNVRSVSFHPSGDFLLAGS 540 Q+ +RS+SFHPSGDF+L G+ Sbjct: 215 QEAEMLRSISFHPSGDFILVGT 236
BLAST of EY693212 vs. ExPASy Swiss-Prot
Match: CSTF1_PONAB (Cleavage stimulation factor 50 kDa subunit OS=Pongo abelii GN=CSTF1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.728e-24 Identity = 51/128 (39.84%), Postives = 77/128 (60.16%), Query Frame = 3 Query: 15 DTKGSSKSFPKLETRHLSEHKNIARCARFSPDGRFIATGSADTSIKLFEVAKIK-------QMMLPDSTDGPVR--PVIRTFYDHIQPINDLDFHPQNTVLISGGKDHTIKFFDFSKATAKRAFRVIQ 371 D + S + ET +++ HK R A +S DG+ IATGSAD SIK+ + ++ ++M+ ++ + PVIRT YDH+ + L FHP +L SG +D+T+K FD+SK +AKRAF+ IQ Sbjct: 88 DVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQ 215 HSP 2 Score: 34.6538 bits (78), Expect = 2.728e-24 Identity = 13/22 (59.09%), Postives = 18/22 (81.82%), Query Frame = 1 Query: 475 QDTHNVRSVSFHPSGDFLLAGS 540 Q+ +RS+SFHPSGDF+L G+ Sbjct: 215 QEAEMLRSISFHPSGDFILVGT 236
BLAST of EY693212 vs. ExPASy Swiss-Prot
Match: CSTF1_MOUSE (Cleavage stimulation factor 50 kDa subunit OS=Mus musculus GN=Cstf1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.728e-24 Identity = 51/128 (39.84%), Postives = 77/128 (60.16%), Query Frame = 3 Query: 15 DTKGSSKSFPKLETRHLSEHKNIARCARFSPDGRFIATGSADTSIKLFEVAKIK-------QMMLPDSTDGPVR--PVIRTFYDHIQPINDLDFHPQNTVLISGGKDHTIKFFDFSKATAKRAFRVIQ 371 D + S + ET +++ HK R A +S DG+ IATGSAD SIK+ + ++ ++M+ ++ + PVIRT YDH+ + L FHP +L SG +D+T+K FD+SK +AKRAF+ IQ Sbjct: 88 DVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQ 215 HSP 2 Score: 34.6538 bits (78), Expect = 2.728e-24 Identity = 13/22 (59.09%), Postives = 18/22 (81.82%), Query Frame = 1 Query: 475 QDTHNVRSVSFHPSGDFLLAGS 540 Q+ +RS+SFHPSGDF+L G+ Sbjct: 215 QEAEMLRSISFHPSGDFILVGT 236
BLAST of EY693212 vs. ExPASy Swiss-Prot
Match: CSTF1_HUMAN (Cleavage stimulation factor 50 kDa subunit OS=Homo sapiens GN=CSTF1 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.728e-24 Identity = 51/128 (39.84%), Postives = 77/128 (60.16%), Query Frame = 3 Query: 15 DTKGSSKSFPKLETRHLSEHKNIARCARFSPDGRFIATGSADTSIKLFEVAKIK-------QMMLPDSTDGPVR--PVIRTFYDHIQPINDLDFHPQNTVLISGGKDHTIKFFDFSKATAKRAFRVIQ 371 D + S + ET +++ HK R A +S DG+ IATGSAD SIK+ + ++ ++M+ ++ + PVIRT YDH+ + L FHP +L SG +D+T+K FD+SK +AKRAF+ IQ Sbjct: 88 DVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQ 215 HSP 2 Score: 34.6538 bits (78), Expect = 2.728e-24 Identity = 13/22 (59.09%), Postives = 18/22 (81.82%), Query Frame = 1 Query: 475 QDTHNVRSVSFHPSGDFLLAGS 540 Q+ +RS+SFHPSGDF+L G+ Sbjct: 215 QEAEMLRSISFHPSGDFILVGT 236 The following BLAST results are available for this feature:
BLAST of EY693212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY693212 ID=EY693212; Name=EY693212; organism=Citrus sinensis; type=EST; length=881bpback to top |