EY693194

Overview
NameEY693194
Unique NameEY693194
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693194 vs. ExPASy Swiss-Prot
Match: CUL1_ARATH (Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 2.469e-83
Identity = 170/294 (57.82%), Postives = 205/294 (69.73%), Query Frame = 3
Query:    9 SVLFHYLDRYFIARRSLPPLNEPGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDHKVEDLSRMFRLFSKYLEA*ILFRTSLSSMLLLRGQPW*NWLKMQQAIRRQKKGMGAAYKRQVFVRKGLGCLKK--PYNMEWMFPKHPLFQNLLRR-F*GFCKR--GGCSSRSKSWQFWEKFFKK 875
            S  F+YLDRYFIARRSLPPLNE GLTCFRDLVY EL+ KV+ AVI L+D+EREGEQIDRALLKNVLDI+VEIGMGQM+ YE DFE+ ML+DT++YYSRKAS+WI EDSCPDYMLK+EECLK+E++RV+HYLHSSSEPKL+EKVQHELL V+A+QLLEKEHSGC ALLRD KV+DLSRM+RL+ K L             +   G      ++  +     +    A+ + QV +RK +    K   Y  E  F  H LF   L+  F  FC +   G SS      F +   KK
Sbjct:  109 SRFFYYLDRYFIARRSLPPLNEVGLTCFRDLVYNELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIYVEIGMGQMERYEEDFESFMLQDTSSYYSRKASSWIQEDSCPDYMLKSEECLKKERERVAHYLHSSSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKVDDLSRMYRLYHKILRGLEPVANIFKQHVTAEGNA---LVQQAEDTATNQVANTASVQEQVLIRKVIELHDKYMVYVTE-CFQNHTLFHKALKEAFEIFCNKTVAGSSSAELLATFCDNILKK 398          
BLAST of EY693194 vs. ExPASy Swiss-Prot
Match: CUL3_DICDI (Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.264e-36
Identity = 76/195 (38.97%), Postives = 126/195 (64.62%), Query Frame = 3
Query:   24 YLDRYFIARRSLPPLNEPGLTCFRDLVY--TELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDHKVEDLSRMFRLFSKYLEA*ILFRTSLSS 602
            Y+DR ++ + +L  + + GL  FRD V   + +  ++ + +++++ +EREGE IDR L+KN++ + +++G+   + Y  DFE  +L  T+++Y  ++   I   SCPDYM K E CLK E +RVSHYL SSSEPKL E  + +L+S +   L++ E+SG  ++L+D K+EDL RM+ LFS+  +   L +  +SS
Sbjct:  120 YMDRNYVKQNNLSSVFDLGLYLFRDNVAHCSTIKDRLLNTLLSMVQKEREGEVIDRILIKNIVQMLIDLGVNSKNVYIEDFEKPLLLKTSSHYQAQSQTLIQTCSCPDYMKKVEICLKEELERVSHYLDSSSEPKLKEVCEKQLISNHMRTLIDMENSGLISMLKDDKIEDLKRMYNLFSRVSDGLNLMKDVISS 314          
BLAST of EY693194 vs. ExPASy Swiss-Prot
Match: CUL3_XENTR (Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.683e-23
Identity = 56/181 (30.94%), Postives = 106/181 (58.56%), Query Frame = 3
Query:   24 YLDRYFIARRSLPPLNEPGLTCFRDLV--YTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDHKVEDLSRMFRLFSK 560
            Y+DR ++ + ++  +   GL  FRD V  Y  +   +R  ++ +I +ER+GE +DR  ++N   + + +G+     YE DFE   L+ +A ++  ++  ++ E+S   Y+ K E  +  E +RV H L  S+E  +++ V+ EL+S +   ++E E+SG   +L++ K EDL+ M++LFS+
Sbjct:  125 YMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSR 305          
BLAST of EY693194 vs. ExPASy Swiss-Prot
Match: CUL3_MOUSE (Cullin-3 OS=Mus musculus GN=Cul3 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.683e-23
Identity = 56/181 (30.94%), Postives = 106/181 (58.56%), Query Frame = 3
Query:   24 YLDRYFIARRSLPPLNEPGLTCFRDLV--YTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDHKVEDLSRMFRLFSK 560
            Y+DR ++ + ++  +   GL  FRD V  Y  +   +R  ++ +I +ER+GE +DR  ++N   + + +G+     YE DFE   L+ +A ++  ++  ++ E+S   Y+ K E  +  E +RV H L  S+E  +++ V+ EL+S +   ++E E+SG   +L++ K EDL+ M++LFS+
Sbjct:  125 YMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSR 305          
BLAST of EY693194 vs. ExPASy Swiss-Prot
Match: CUL3B_XENLA (Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.683e-23
Identity = 56/181 (30.94%), Postives = 106/181 (58.56%), Query Frame = 3
Query:   24 YLDRYFIARRSLPPLNEPGLTCFRDLV--YTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDHKVEDLSRMFRLFSK 560
            Y+DR ++ + ++  +   GL  FRD V  Y  +   +R  ++ +I +ER+GE +DR  ++N   + + +G+     YE DFE   L+ +A ++  ++  ++ E+S   Y+ K E  +  E +RV H L  S+E  +++ V+ EL+S +   ++E E+SG   +L++ K EDL+ M++LFS+
Sbjct:  125 YMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSR 305          
BLAST of EY693194 vs. ExPASy Swiss-Prot
Match: CUL3A_XENLA (Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.683e-23
Identity = 56/181 (30.94%), Postives = 106/181 (58.56%), Query Frame = 3
Query:   24 YLDRYFIARRSLPPLNEPGLTCFRDLV--YTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDHKVEDLSRMFRLFSK 560
            Y+DR ++ + ++  +   GL  FRD V  Y  +   +R  ++ +I +ER+GE +DR  ++N   + + +G+     YE DFE   L+ +A ++  ++  ++ E+S   Y+ K E  +  E +RV H L  S+E  +++ V+ EL+S +   ++E E+SG   +L++ K EDL+ M++LFS+
Sbjct:  125 YMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSR 305          
BLAST of EY693194 vs. ExPASy Swiss-Prot
Match: CUL3_HUMAN (Cullin-3 OS=Homo sapiens GN=CUL3 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.198e-23
Identity = 56/181 (30.94%), Postives = 105/181 (58.01%), Query Frame = 3
Query:   24 YLDRYFIARRSLPPLNEPGLTCFRDLV--YTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMDYYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDHKVEDLSRMFRLFSK 560
            Y+DR ++ + ++  +   GL  FRD V  Y  +   +R  ++ +I +ER+GE +DR  ++N   + + +G+     YE DFE   L+ +A ++  ++  ++ E+S   Y+ K E  +  E +RV H L  S+E  +++ V+ EL+S +   ++E E+SG   +L++ K EDL  M++LFS+
Sbjct:  125 YMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLGCMYKLFSR 305          
BLAST of EY693194 vs. ExPASy Swiss-Prot
Match: CUL1_PONAB (Cullin-1 OS=Pongo abelii GN=CUL1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.986e-21
Identity = 62/194 (31.96%), Postives = 106/194 (54.64%), Query Frame = 3
Query:   24 YLDRYFI------ARRSLPPLNEPGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD---------YYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDHKVEDLSRMFRLFSK 560
            YL+R+++       R+ +  +    L  +RD ++  LN +V +AV+ LI++ER GE I+  L+  V+  +VE+G+ + D          Y+  FE+  L DT  +Y+R+++ ++ ++   +YM KAE  L  E+ RV  YLH S++ +L  K +  L+  +    LE  H+    LL   K EDL RM+ L S+
Sbjct:  139 YLNRHWVRRECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRMYNLVSR 328          
BLAST of EY693194 vs. ExPASy Swiss-Prot
Match: CUL1_MOUSE (Cullin-1 OS=Mus musculus GN=Cul1 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.986e-21
Identity = 62/194 (31.96%), Postives = 106/194 (54.64%), Query Frame = 3
Query:   24 YLDRYFI------ARRSLPPLNEPGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD---------YYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDHKVEDLSRMFRLFSK 560
            YL+R+++       R+ +  +    L  +RD ++  LN +V +AV+ LI++ER GE I+  L+  V+  +VE+G+ + D          Y+  FE+  L DT  +Y+R+++ ++ ++   +YM KAE  L  E+ RV  YLH S++ +L  K +  L+  +    LE  H+    LL   K EDL RM+ L S+
Sbjct:  139 YLNRHWVRRECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRMYNLVSR 328          
BLAST of EY693194 vs. ExPASy Swiss-Prot
Match: CUL1_HUMAN (Cullin-1 OS=Homo sapiens GN=CUL1 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 5.986e-21
Identity = 62/194 (31.96%), Postives = 106/194 (54.64%), Query Frame = 3
Query:   24 YLDRYFI------ARRSLPPLNEPGLTCFRDLVYTELNGKVRDAVITLIDQEREGEQIDRALLKNVLDIFVEIGMGQMD---------YYENDFETAMLKDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDHKVEDLSRMFRLFSK 560
            YL+R+++       R+ +  +    L  +RD ++  LN +V +AV+ LI++ER GE I+  L+  V+  +VE+G+ + D          Y+  FE+  L DT  +Y+R+++ ++ ++   +YM KAE  L  E+ RV  YLH S++ +L  K +  L+  +    LE  H+    LL   K EDL RM+ L S+
Sbjct:  139 YLNRHWVRRECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKH----LEIFHTEFQNLLDADKNEDLGRMYNLVSR 328          
The following BLAST results are available for this feature:
BLAST of EY693194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
CUL1_ARATH2.469e-8357.82Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1[more]
CUL3_DICDI2.264e-3638.97Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 ... [more]
CUL3_XENTR1.683e-2330.94Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1[more]
CUL3_MOUSE1.683e-2330.94Cullin-3 OS=Mus musculus GN=Cul3 PE=1 SV=1[more]
CUL3B_XENLA1.683e-2330.94Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1[more]
CUL3A_XENLA1.683e-2330.94Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1[more]
CUL3_HUMAN2.198e-2330.94Cullin-3 OS=Homo sapiens GN=CUL3 PE=1 SV=2[more]
CUL1_PONAB5.986e-2131.96Cullin-1 OS=Pongo abelii GN=CUL1 PE=2 SV=1[more]
CUL1_MOUSE5.986e-2131.96Cullin-1 OS=Mus musculus GN=Cul1 PE=1 SV=1[more]
CUL1_HUMAN5.986e-2131.96Cullin-1 OS=Homo sapiens GN=CUL1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-A01-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693194 ID=EY693194; Name=EY693194; organism=Citrus sinensis; type=EST; length=891bp
CCCACGCGTCCGTTCTCTTTCATTATCTTGATCGGTACTTTATAGCCCGG
AGGTCACTGCCACCCCTTAATGAACCTGGCCTTACCTGTTTCCGTGATCT
GGTGTACACGGAATTAAATGGAAAAGTTAGAGATGCTGTAATTACTTTGA
TTGATCAAGAGCGTGAGGGTGAGCAGATCGATCGGGCGTTGTTGAAGAAT
GTTTTAGATATTTTTGTTGAAATTGGGATGGGGCAAATGGATTACTATGA
AAATGATTTTGAAACTGCCATGCTTAAAGATACTGCTGCATATTATTCAC
GGAAAGCTTCAAACTGGATCTTAGAAGATTCCTGTCCAGACTATATGTTA
AAGGCTGAGGAGTGTCTGAAAAGGGAGAAAGATAGGGTTTCTCATTACTT
GCATTCTAGTAGTGAGCCAAAGTTACTAGAGAAAGTTCAACATGAGTTAT
TGTCAGTATATGCAAATCAACTGCTTGAGAAAGAGCACTCAGGATGCCAT
GCATTGCTCAGAGACCACAAGGTGGAGGATTTGTCAAGAATGTTCAGGCT
CTTTTCTAAATACCTCGAGGCTTAAATCCTGTTTCGAACATCTTTAAGCA
GCATGTTACTGCTGAGGGGACAACCTTGGTGAAACTGGCTGAAGATGCAG
CAAGCAATAAGAAGGCAGAAAAAAGGGATGGGGGCCGCTTACAAGAGACA
GGTTTTTGTCAGGAAAGGATTGGGTTGCCTGAAAAAACCTTACAATATGG
AATGGATGTTTCCGAAACACCCTCTCTTCCAAAATCTCTTAAGGAGGTTT
TGAGGCTTCTGCAAAAGGGGTGGCTGTAGCTCCAGGTCAAAATCCTGGCA
ATTTTGGGAAAAATTCTTTAAAAAGCGGGAGCCGAAACTAT
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