EY693193

Overview
NameEY693193
Unique NameEY693193
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY693193 vs. ExPASy Swiss-Prot
Match: F10AL_ARATH (FAM10 family protein At4g22670 OS=Arabidopsis thaliana GN=At4g22670 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.303e-15
Identity = 53/133 (39.85%), Postives = 66/133 (49.62%), Query Frame = 1 
Query:  235 MDAAKVKELKQFIDQCKSNPSVLADPSLSFFRDYLESLHAKVPPDAYKEGK-SEPRA----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQRWETVRQKLLMRTRSGC-GGKAKAMEA 615
            MD+ K+ ELK FIDQCKS+PS+L  PSLSFFRDYLESL AK+P   ++E K ++PR+                                     GD VE DNDPPQ+      ++    R      K KAMEA
Sbjct:    1 MDSTKLSELKVFIDQCKSDPSLLTTPSLSFFRDYLESLGAKIPTGVHEEDKDTKPRSFVVEESDDDMDETEEVKPKVEEEEEEDEIVESDVELEGDTVEPDNDPPQKMGDSSVEVTDENREAAQEAKGKAMEA 133
The following BLAST results are available for this feature:
BLAST of EY693193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
F10AL_ARATH6.303e-1539.85FAM10 family protein At4g22670 OS=Arabidopsis thal... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-008-H11-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693193 ID=EY693193; Name=EY693193; organism=Citrus sinensis; type=EST; length=880bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGAAAAAAAGAAAAAG
AAAAAAGCATGAAAGCTAATGCATATACAGAAGAAGTTACTAGAAGAACC
TAGCCACACTCTCGATTACAGACTCCAGCTCCTAGCCCAGTAGCCTGCGC
AAGTAAAGGCACTCTCAGACACATCACGCCAATTACTCCGTAATCTTCGA
GAAGCTAAGAACCCTTGAACGAAGGGAGACGACGATGGACGCAGCAAAAG
TGAAAGAACTGAAACAGTTCATCGATCAGTGCAAATCCAACCCTTCCGTT
CTCGCCGACCCCTCCCTCTCCTTCTTCCGCGACTATCTCGAAAGTCTCCA
TGCGAAAGTGCCTCCCGATGCGTACAAAGAAGGCAAATCCGAACCGAGGG
CCTCTGTGGTGGAGGAGAGCGAAGAGGAAGAACAAAGGGTAGAAGTAGAA
GAAAAAGAGGAAGAAGAGGATGAAATAGTCGAGTCCGATATTGAGCTTGA
AGGAGATATTGTGGAGGCTGATAATGATCCTCCTCAGAGATGGGAGACAG
TTCGGCAGAAGTTACTGATGAGAACGCGAAGCGGCTGCGGAGGCAAGGCC
AAGGCCATGGAAGCATCTCTGAAGGAAAGTTGACGANGCATTGAGCTTTC
ACTGAGGCTATATGCTGAATCATCAGCCATTATGATGCACTAGAGCAGTG
TATCATCAAATGAAGAGCCTATGCTGCATCCGGATGCACTGCGCTTTAAG
ATAACCCGATCTGCTAGGCCTACAAACCGGGGCTGCACATGCATGCTAGT
CACGGGAAGAGCGGGCATGACTCCTGTGCTCCAAAAAATTTGAGAAAAAA
CTGTGGTCTTAAAGGTGACCCATGCCGAGG
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