EY693191
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693191 vs. ExPASy Swiss-Prot
Match: CB4A_ARATH (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 2.131e-90 Identity = 165/225 (73.33%), Postives = 185/225 (82.22%), Query Frame = 3 Query: 129 IGTRL-PDIYSNSGRIQARFGFGKRKTAPKKSKQSSGSSDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDYDSLDQNLAKNPAGDIIGTRIEASDMQSTPLQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIXGLVIGYIEFQRTQSLTPRKTL-PREKSF*SSGLGR*PGKKXTLQ 797 +GTR+ P I+ SGR A FGFGK+K APKKS + + ++DRPLWYPGA +P+WLDGSLVGDYGFDPFGLGKPAEYLQ+D DSLDQNLAKN AGD+IGTR EA+D +STP QPY+EVFG+QRFRECELIHGRWAMLATLGAL+VEWLTG+TWQDAGKVELV+GSSYLGQPLPFSI+TLIWI LVIGYIEFQR L K L P K F GL P K LQ Sbjct: 15 MGTRVAPGIHPGSGRFTAVFGFGKKKAAPKKSAKKTVTTDRPLWYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQ 239
BLAST of EY693191 vs. ExPASy Swiss-Prot
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 3.403e-88 Identity = 166/225 (73.78%), Postives = 184/225 (81.78%), Query Frame = 3 Query: 129 IGTRL-PDIYSNSGRIQARFGFGKRKTAPKKSKQSSGSSDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDYDSLDQNLAKNPAGDIIGTRIEASDMQSTPLQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIXGLVIGYIEFQRTQSLTPRKTL-PREKSF*SSGLGR*PGKKXTLQ 797 +GTR+ DI SNS R ARFGFG +K +PKK+K + SDRPLW+PGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+D DSLDQNLAKN G++IGTR EA D +STP QPY+EVFGLQRFRECELIHGRWAMLATLGA+TVEWLTG+TWQDAGKVELV+GSSYLGQPLPFSI+TLIWI LVIGYIEFQR L K L P K F GL P KK LQ Sbjct: 14 MGTRVVSDISSNSSRFTARFGFGTKKASPKKAK--TVISDRPLWFPGAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQ 236
BLAST of EY693191 vs. ExPASy Swiss-Prot
Match: CB4C_ARATH (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 3.644e-82 Identity = 153/226 (67.70%), Postives = 173/226 (76.55%), Query Frame = 3 Query: 132 GTRLPDIYSNSGRIQARFGF--GKRKTAP--KKSKQSSGSSDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDYDSLDQNLAKNPAGDIIGTRIEASDMQSTPLQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIXGLVIGYIEFQRTQSLTPRKTLPREKSF*SSGLGR*PGKKXTLQ 797 G R+ D +GR+QARFGF GK+K AP KKS+Q DR +W+PGA PEWLDGS++GD GFDPFGLGKPAEYLQYD+D LDQNLAKN AGDIIG E+S+++ TP QPYTEVFG+QRFRECELIHGRWAML TLGA+ VE LTGI WQDAGKVELVEGSSYLGQPLPFS+TTLIWI LV+GYIEFQR L P K + F GL P K TL+ Sbjct: 14 GIRIQDPRPGTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGDRLVWFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGGYFDPLGLAADPEKLDTLK 239
BLAST of EY693191 vs. ExPASy Swiss-Prot
Match: CB29_CHLRE (Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3) HSP 1 Score: 176.022 bits (445), Expect = 2.520e-43 Identity = 95/183 (51.91%), Postives = 111/183 (60.66%), Query Frame = 3 Query: 198 RKTAPKKSKQSSGSSDRP-----LWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDYDSLDQNLAKNPAGDIIGTRIEASDMQSTP--LQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIXGLVIGYIEFQRTQSLTPRK 725 +K A +S G R LW P PEWLDGSL GD GFDP GL KP+E++ D DQN AKN G + D S+ L PY+EVFGL RFRECELIHGRWAMLA LGAL E TG++W +AGKVEL +G+SY G LPFSIT LIWI +++G EF R P K Sbjct: 29 KKVATSTGTRSGGVGYRKYQGDALWLPNTTRPEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSENRLAPYSEVFGLARFRECELIHGRWAMLACLGALVAEATTGVSWVEAGKVEL-DGASYAGLSLPFSITQLIWIEVILVGGAEFYRNSETNPEK 210 HSP 2 Score: 21.557 bits (44), Expect = 2.520e-43 Identity = 9/17 (52.94%), Postives = 11/17 (64.71%), Query Frame = 2 Query: 698 KNSELDPEKDSTPGEKF 748 +NSE +PEK PG F Sbjct: 202 RNSETNPEKRCYPGGVF 218
BLAST of EY693191 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.404e-17 Identity = 57/183 (31.15%), Postives = 80/183 (43.72%), Query Frame = 3 Query: 171 IQARFGFGKRKTAPKKSKQSSGSSDRPLWYPGAKA------PEWLDGSLVGDYGFDPFGLGKPAEYLQYDYDSLDQNLAKNPAGDIIGTRIEASDMQSTPLQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIXGLVIGYIEFQR 701 + ++ G G T+ K ++ ++ + W P K PEWLDGSL GD+GFDP GLGK +L++ +RE ELIHGRWAMLA LG + TGI W +AG + G PFS TL+ L++G++E +R Sbjct: 32 VNSKVGAGVSTTSRKLVVVAAAAAPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKW-------------------------------------------YREAELIHGRWAMLAVLGIFVGQAWTGIPWFEAG--------ADPGAVAPFSFGTLLGTQLLLMGWVESKR 163 HSP 2 Score: 23.8682 bits (50), Expect = 4.404e-17 Identity = 13/34 (38.24%), Postives = 16/34 (47.06%), Query Frame = 1 Query: 721 ERLYPGRKVFDPLGWAADPERXAPSNGRDQHARL 822 E+ YPG K FDPL A + D+ RL Sbjct: 194 EQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERL 227
BLAST of EY693191 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.085e-14 Identity = 57/180 (31.67%), Postives = 74/180 (41.11%), Query Frame = 3 Query: 180 RFGFGKRKTAPKKSKQSSGSSDRPLWYPGAKA------PEWLDGSLVGDYGFDPFGLGKPAEYLQYDYDSLDQNLAKNPAGDIIGTRIEASDMQSTPLQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIXGLVIGYIEFQR 701 RF APKKS W P K+ PEWLDGSL GD+GFDP GLGK +L++ +RE ELIHGRWAM A LG + +GI W +AG + G PFS +L+ L++G++E +R Sbjct: 41 RFVVAAAAVAPKKS-----------WIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKW-------------------------------------------YREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAG--------ADPGAIAPFSFGSLLGTQLLLMGWVESKR 158 HSP 2 Score: 23.483 bits (49), Expect = 1.085e-14 Identity = 10/16 (62.50%), Postives = 11/16 (68.75%), Query Frame = 1 Query: 721 ERLYPGRKVFDPLGWA 768 E+ YPG K FDPL A Sbjct: 189 EQGYPGGKFFDPLALA 204
BLAST of EY693191 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.017e-14 Identity = 50/155 (32.26%), Postives = 66/155 (42.58%), Query Frame = 3 Query: 255 WYPGAKA------PEWLDGSLVGDYGFDPFGLGKPAEYLQYDYDSLDQNLAKNPAGDIIGTRIEASDMQSTPLQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIXGLVIGYIEFQR 701 W P + PEWLDGSL GDYGFDP GLGK +L++ +RE ELIHGRWAM A LG + +GI W +AG + G PFS TL+ +++G++E +R Sbjct: 55 WIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKW-------------------------------------------YREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAG--------ADPGAIAPFSFGTLLGTQLILMGWVESKR 158 HSP 2 Score: 23.483 bits (49), Expect = 4.017e-14 Identity = 10/16 (62.50%), Postives = 11/16 (68.75%), Query Frame = 1 Query: 721 ERLYPGRKVFDPLGWA 768 E+ YPG K FDPL A Sbjct: 189 EQGYPGGKFFDPLALA 204
BLAST of EY693191 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.331e-12 Identity = 55/179 (30.73%), Postives = 77/179 (43.02%), Query Frame = 3 Query: 255 WYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDYDSLDQNLAKNPAGDIIGTRIEASDMQSTPLQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEG--SSYLGQPLPF-SITTLIWIXGLVIGYIEFQRTQSLTPRKTLPREKSF*SSGLGR*PGK 782 W PG P +LDGS GD+GFD GLG+ PA L+R++E ELIH RWAMLA G + E L W A + + G ++YLGQP+P+ ++ T++ I L I ++E QR+ K +F G + P K Sbjct: 49 WMPGQPRPSYLDGSAPGDFGFDSLGLGEV------------------PAN-------------------------LERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPAK 184 The following BLAST results are available for this feature:
BLAST of EY693191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY693191 ID=EY693191; Name=EY693191; organism=Citrus sinensis; type=EST; length=904bpback to top |