EY693188

Overview
NameEY693188
Unique NameEY693188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length948
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693188 vs. ExPASy Swiss-Prot
Match: CSK2E_ARATH (Putative casein kinase II subunit beta-4 OS=Arabidopsis thaliana GN=At2g44680 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 4.488e-62
Identity = 130/216 (60.19%), Postives = 148/216 (68.52%), Query Frame = 2
Query:  203 MYRDR-------GGGASKSEIVAGPLDRKRINDALDKHLEKTSPSTSRALSSKDKERLSVPSTSAGKSQLDHRDSRSASLPKNKCXXXXXXXXXXXXXXXXXXXXXXXWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILGCESSHGDXVTEEQNELVESAAEMLYGLIHERYILTSKGWAACY-KXQKLDFGRCQEYTAVG 826
            MY+DR       GGG+S+SEI+ G +DRKRINDALDKHL+K+SPSTSR  +SKDK+  SVPSTS  KSQL  R     S   ++                        WISWFCNLRGNEFFCEVD++YIQDDFNLCGLS QVPYYDYALDLIL  ESS+GD  TEEQ+E+VESAAEMLYGLIH RYILT+KG AA   K +  DFGRC      G
Sbjct:    1 MYKDRSGGGIMGGGGSSRSEILGGAIDRKRINDALDKHLKKSSPSTSRVFTSKDKD--SVPSTSTAKSQLHSRSPDVESDTDSE-----------GSDVSGSEGDDTSWISWFCNLRGNEFFCEVDEDYIQDDFNLCGLSGQVPYYDYALDLILDVESSNGDMFTEEQHEMVESAAEMLYGLIHVRYILTTKGMAAMMEKYKNYDFGRCPRVFCCG 203          
BLAST of EY693188 vs. ExPASy Swiss-Prot
Match: CSK2B_ARATH (Casein kinase II subunit beta OS=Arabidopsis thaliana GN=CKB1 PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.806e-56
Identity = 126/216 (58.33%), Postives = 142/216 (65.74%), Query Frame = 2
Query:  203 MYRDRGGGASKSEIVAGPLDRKRINDALDKHLEKTSPSTSRALSSKDKERLSVPSTSA---GKSQ---LDHRDSRSASLPKNKCXXXXXXXXXXXXXXXXXXXXXXX-WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILGCESSHGDXVTEEQNELVESAAEMLYGLIHERYILTSKGWAACY-KXQKLDFGRCQEYTAVG 826
            MYRDRG   S+ E+V    DRKRINDAL    E+ SPSTSR ++ K K  ++  +T+A   GK Q   ++HRDSRSASL KN                          WISWFCNLRGNEFFCEVDD+YIQDDFNLCGLSS VPYY+YALDLIL  ESS G+  TEEQNEL+ESAAEMLYGLIH RYILTSKG AA   K +  DFGRC      G
Sbjct:    1 MYRDRGTVNSRPEVV----DRKRINDAL----ERPSPSTSRQVNGKGKGTVTAATTTANLIGKQQSNNINHRDSRSASLSKNNTVSDDESDTDSEESDVSGSDGEDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSLVPYYEYALDLILDVESSQGEMFTEEQNELIESAAEMLYGLIHARYILTSKGLAAMLDKYKNYDFGRCPRVYCCG 208          
BLAST of EY693188 vs. ExPASy Swiss-Prot
Match: CSK2D_ARATH (Casein kinase II subunit beta-3 OS=Arabidopsis thaliana GN=CKB3 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.002e-53
Identity = 118/215 (54.88%), Postives = 143/215 (66.51%), Query Frame = 2
Query:  203 MYRDR----GGGASKSEIVAGPLDRKRINDALDKHLEK--TSPSTSRALSSKDKERLSVPSTSAGKSQLDHRDSRSASLPKNKCXXXXXXXXXXXXXXXXXXXXXXXWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILGCESSHGDXVTEEQNELVESAAEMLYGLIHERYILTSKGWAA-CYKXQKLDFGRCQEYTAVG 826
            MY++R    GGG+S+SEI+ G +DRKRINDAL+K LEK  TS +TSR  SSKDK+  S  ST   K+QL   +S + S   +                         WISWFCNLRGN+FFCEVD++YIQDDFNLCGLS QVPYYDYALDLIL  ++S+ +  T+EQ+E+VESAAEMLYGLIH RYILT+KG AA   K +  DFGRC      G
Sbjct:    1 MYKERSGGGGGGSSRSEILGGAIDRKRINDALNKKLEKSSTSTTTSRVFSSKDKDPFSFTST---KTQLPDVESETDSEGSD---------------VSGSEGDDTSWISWFCNLRGNDFFCEVDEDYIQDDFNLCGLSGQVPYYDYALDLILDVDASNSEMFTDEQHEMVESAAEMLYGLIHVRYILTTKGMAAMTEKYKNCDFGRCPRVFCCG 197          
BLAST of EY693188 vs. ExPASy Swiss-Prot
Match: CSK2C_ARATH (Casein kinase II subunit beta' OS=Arabidopsis thaliana GN=CKB2 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 6.722e-50
Identity = 114/212 (53.77%), Postives = 129/212 (60.85%), Query Frame = 2
Query:  203 MYRDRGGGASKSEIVAGPLDRKRINDALDKHLEKTSPSTSRALSSKDKERLSVPSTSAGKSQL-DHRDSRSASLPKNKCXXXXXXXXXXXXXXXXXXXXXXX--WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILGCESSHGDXVTEEQNELVESAAEMLYGLIHERYILTSKGWAACY-KXQKLDFGRCQEYTAVG 826
            MYR+RG   SKSE+V    DRKRIN+  D       PS S +     K +++  S   GK QL D   SRS S+ K                            WISWFCNLRGNEFFCEVDD+YIQDDFNLCGLS QVPYYDYALDLIL  ESSHG+  TEEQNEL+ESAAEMLYG+IH R+ILTSKG A+   K +  DFGRC      G
Sbjct:    1 MYRERGMVGSKSEVV----DRKRINEIHDNR-----PSHSMSQPVNGKGKVTSTSVLMGKQQLHDKESSRSGSISKTNISDAVDISDTDSEESEVSGSDGEDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSHQVPYYDYALDLILDVESSHGEMFTEEQNELIESAAEMLYGMIHARFILTSKGLASMLDKYKNYDFGRCPRVYCCG 203          
BLAST of EY693188 vs. ExPASy Swiss-Prot
Match: CSK2B_XENLA (Casein kinase II subunit beta OS=Xenopus laevis GN=csnk2b PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.486e-28
Identity = 62/101 (61.39%), Postives = 73/101 (72.28%), Query Frame = 2
Query:  506 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILGCESSHGDXVTEEQNELVESAAEMLYGLIHERYILTSKGWAACY-KXQKLDFGRC 805
            WISWFC LRGNEFFCEVD++YIQD FNL GL+ QVP+Y  ALD+IL  E          Q++L+E AAEMLYGLIH RYILT++G A    K Q+ DFG C
Sbjct:    9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYC 109          
BLAST of EY693188 vs. ExPASy Swiss-Prot
Match: CSK2B_RAT (Casein kinase II subunit beta OS=Rattus norvegicus GN=Csnk2b PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.486e-28
Identity = 62/101 (61.39%), Postives = 73/101 (72.28%), Query Frame = 2
Query:  506 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILGCESSHGDXVTEEQNELVESAAEMLYGLIHERYILTSKGWAACY-KXQKLDFGRC 805
            WISWFC LRGNEFFCEVD++YIQD FNL GL+ QVP+Y  ALD+IL  E          Q++L+E AAEMLYGLIH RYILT++G A    K Q+ DFG C
Sbjct:    9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYC 109          
BLAST of EY693188 vs. ExPASy Swiss-Prot
Match: CSK2B_RABIT (Casein kinase II subunit beta OS=Oryctolagus cuniculus GN=CSNK2B PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.486e-28
Identity = 62/101 (61.39%), Postives = 73/101 (72.28%), Query Frame = 2
Query:  506 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILGCESSHGDXVTEEQNELVESAAEMLYGLIHERYILTSKGWAACY-KXQKLDFGRC 805
            WISWFC LRGNEFFCEVD++YIQD FNL GL+ QVP+Y  ALD+IL  E          Q++L+E AAEMLYGLIH RYILT++G A    K Q+ DFG C
Sbjct:    9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYC 109          
BLAST of EY693188 vs. ExPASy Swiss-Prot
Match: CSK2B_PIG (Casein kinase II subunit beta OS=Sus scrofa GN=CSNK2B PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.486e-28
Identity = 62/101 (61.39%), Postives = 73/101 (72.28%), Query Frame = 2
Query:  506 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILGCESSHGDXVTEEQNELVESAAEMLYGLIHERYILTSKGWAACY-KXQKLDFGRC 805
            WISWFC LRGNEFFCEVD++YIQD FNL GL+ QVP+Y  ALD+IL  E          Q++L+E AAEMLYGLIH RYILT++G A    K Q+ DFG C
Sbjct:    9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYC 109          
BLAST of EY693188 vs. ExPASy Swiss-Prot
Match: CSK2B_MOUSE (Casein kinase II subunit beta OS=Mus musculus GN=Csnk2b PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.486e-28
Identity = 62/101 (61.39%), Postives = 73/101 (72.28%), Query Frame = 2
Query:  506 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILGCESSHGDXVTEEQNELVESAAEMLYGLIHERYILTSKGWAACY-KXQKLDFGRC 805
            WISWFC LRGNEFFCEVD++YIQD FNL GL+ QVP+Y  ALD+IL  E          Q++L+E AAEMLYGLIH RYILT++G A    K Q+ DFG C
Sbjct:    9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYC 109          
BLAST of EY693188 vs. ExPASy Swiss-Prot
Match: CSK2B_HUMAN (Casein kinase II subunit beta OS=Homo sapiens GN=CSNK2B PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.486e-28
Identity = 62/101 (61.39%), Postives = 73/101 (72.28%), Query Frame = 2
Query:  506 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILGCESSHGDXVTEEQNELVESAAEMLYGLIHERYILTSKGWAACY-KXQKLDFGRC 805
            WISWFC LRGNEFFCEVD++YIQD FNL GL+ QVP+Y  ALD+IL  E          Q++L+E AAEMLYGLIH RYILT++G A    K Q+ DFG C
Sbjct:    9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYC 109          
The following BLAST results are available for this feature:
BLAST of EY693188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
CSK2E_ARATH4.488e-6260.19Putative casein kinase II subunit beta-4 OS=Arabid... [more]
CSK2B_ARATH4.806e-5658.33Casein kinase II subunit beta OS=Arabidopsis thali... [more]
CSK2D_ARATH1.002e-5354.88Casein kinase II subunit beta-3 OS=Arabidopsis tha... [more]
CSK2C_ARATH6.722e-5053.77Casein kinase II subunit beta' OS=Arabidopsis thal... [more]
CSK2B_XENLA2.486e-2861.39Casein kinase II subunit beta OS=Xenopus laevis GN... [more]
CSK2B_RAT2.486e-2861.39Casein kinase II subunit beta OS=Rattus norvegicus... [more]
CSK2B_RABIT2.486e-2861.39Casein kinase II subunit beta OS=Oryctolagus cunic... [more]
CSK2B_PIG2.486e-2861.39Casein kinase II subunit beta OS=Sus scrofa GN=CSN... [more]
CSK2B_MOUSE2.486e-2861.39Casein kinase II subunit beta OS=Mus musculus GN=C... [more]
CSK2B_HUMAN2.486e-2861.39Casein kinase II subunit beta OS=Homo sapiens GN=C... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-008-H05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693188 ID=EY693188; Name=EY693188; organism=Citrus sinensis; type=EST; length=948bp
CCACGCGTCCGCTCAAATCAAATCTAGGGTTTCCCGTCTCCATCCCAAAA
AAAGTGTCCTTTAAAGTAAAAAGTCCTTAATTTACGTAATCCATATACAG
GTTTTTCTATGTGAAGTATCAAAGGTGGAATCTTTGGGAGTTTAGGGTTC
TGAAATTGGAAAAGGAAAAAAGAAAATCAAGTAAAAAAGAATTGGGGCAG
CTATGTATAGAGATCGAGGAGGAGGGGCGTCGAAGTCGGAGATAGTGGCA
GGACCGTTGGATCGAAAGCGCATAAACGATGCGCTGGACAAGCATTTAGA
GAAGACATCCCCTTCTACTTCGAGGGCCTTGAGTTCTAAAGACAAGGAGA
GGTTGTCCGTACCTTCCACTTCTGCCGGTAAATCGCAGCTCGATCACCGC
GATTCTCGCTCCGCCTCTCTCCCCAAGAACAAATGCTCTGATGAGGAATC
TGAAACAGACAGTGAAGAATCTGATGTTAGCGGTTCTGATGGAGATGACA
CATCTTGGATCTCATGGTTTTGCAATTTGCGAGGAAATGAATTTTTCTGT
GAAGTTGATGATGAGTACATCCAAGATGATTTTAATCTTTGTGGGTTGAG
CAGTCAAGTTCCATACTATGATTATGCTCTTGATTTGATATTGGGATGTG
AATCTTCTCATGGTGATANTGTCACTGAAGAACAGAATGAACTGGTGGAA
TCAGCAGCAGAGATGCTGTATGGNCTGATTCATGAACGGTACATCCTTAC
TAGCAAGGGATGGGCTGCATGTTATAAANTACAAAAACTTGATTTTGGGA
GATGCCAAGAATATACTGCTGTGGGCACCCTGCCTTCTGTCGGACATCAA
AAATCCTCGTTCATACTGTTAAATTCCTGCCCAATGTGAAATTTATTTTC
TCGGGCAAGACAAGGAAATACAGGGGCTATTTTGGATACCTCCCCCTT
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