EY693187

Overview
NameEY693187
Unique NameEY693187
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693187 vs. ExPASy Swiss-Prot
Match: MEPCE_HUMAN (7SK snRNA methylphosphate capping enzyme OS=Homo sapiens GN=MEPCE PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.795e-34
Identity = 92/251 (36.65%), Postives = 135/251 (53.78%), Query Frame = 1
Query:   43 AQQLKKRKGKDVFPFGNYKNYYGYRIGQGLNEDPRFKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTE--------HNEKRRANASRVEVIEKGDGLEKNVTAAQEEKKAISRNCSPAERNLF-DIVSFKQENFVHGRD------SPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFVLEPSPCVSY--ERIVVCLRHSNQFQISVVSKEF 744
            A   KK++ K  F +GNY  YYGYR      ED R +VLK EWF G+D LD+GCN G +T+ IA K+    ++G+DIDS  +  A  ++R  +  E          +           + K      ++TA++    A       A+ ++F + V F   N+V  RD      +PE  YD +LCLS+TKW+HLNWGD+GL  +F RI++ LRPGGI VLEP P  SY   + +    + N ++I +  ++F
Sbjct:  403 AAGFKKQQRK--FQYGNYCKYYGYR--NPSCEDGRLRVLKPEWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPE--YDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQF 647          
BLAST of EY693187 vs. ExPASy Swiss-Prot
Match: MEPCE_MOUSE (7SK snRNA methylphosphate capping enzyme OS=Mus musculus GN=Mepce PE=1 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.884e-33
Identity = 96/254 (37.80%), Postives = 134/254 (52.76%), Query Frame = 1
Query:   46 QQLKKRKGKDVFPFGNYKNYYGYRIGQGLNEDPRFKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAAQEEKKAISRNCSP------------AERNLF-DIVSFKQENFVHGRDS------PEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFVLEPSPCVSY--ERIVVCLRHSNQFQISVVSKEF 744
            QQLK       F +GNY  YYGYR      ED R +VLK EWF+G+D LD+GCN G +T+ IA K+    ++G+DID   +  A    R+ +R   +E+ R  A   E     +G E  +T  +      S   S             A+ ++F + V F   N+V  RD       PE  YD +LC S+TKW+HLNWGD+GL  +F RI++ LRPGGI VLEP P  SY   + +    + N F+I +  ++F
Sbjct:  386 QQLK-------FQYGNYCKYYGYR--NPSCEDVRLRVLKPEWFQGRDVLDLGCNVGHLTLSIACKWGPARMVGLDIDPRLIHSA----RQNIRHYLSEELRLQAQTSEGDPGTEGEEGTITVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDELVDAQRPE--YDVVLCFSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSYCKRKSLTETIYKNYFRIQLKPEQF 624          
BLAST of EY693187 vs. ExPASy Swiss-Prot
Match: BIN3D_CAEEL (Probable methyltransferase Y17G7B.18 OS=Caenorhabditis elegans GN=Y17G7B.18 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.750e-31
Identity = 90/284 (31.69%), Postives = 139/284 (48.94%), Query Frame = 1
Query:   16 KVEQEEKGEAQQLKKRKG--KDVFPFGNYKNYYGYRIGQGLNEDPRFKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSP----EKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFVLEPSPCVSYERIVVCLRHSNQFQISVVSKEFRKSSRKIGL-------HCRDSGLVVIRTKWFHRQI 828
            ++ +EEK  A+  K++       + +GN+  YYG R+  G   D R  V +K+WFE K  LDIGCN+G +T+ IA+ F+ R I+GIDID + +  A  ++R     E     +  AS         G++    + + E         P      D + FK+EN+V   D      +  +D IL LS+TKWIHLNWGDDG+   F R +  L PGG  ++EP    SY++     + S + + +    EF+    ++ L            G+V  ++K F R I
Sbjct:   94 QLSKEEKSAAENRKQKTEYFNKKYRYGNFDRYYGIRLNPG-ESDKRLSVFQKDWFEHKQALDIGCNAGFLTLSIAKDFSPRRIIGIDIDEHLIGVARKNIRHYCDHETEVSGKFPASF--------GVQFGTVSQRNEAPRSFSTKFP------DNIWFKKENYVLESDEMLDMIQPEFDVILALSITKWIHLNWGDDGMRRFFRRAYAQLHPGGRLIIEPQAFDSYKKRA---KMSEELKANYSKIEFKPEDFEMWLIETVGFESVEKLGVVGAKSKGFERPI 359          
BLAST of EY693187 vs. ExPASy Swiss-Prot
Match: BN3D2_DROME (Probable methyltransferase CG1239 OS=Drosophila melanogaster GN=CG1239 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 2.087e-24
Identity = 85/239 (35.56%), Postives = 112/239 (46.86%), Query Frame = 1
Query:   13 NKVEQEEKGEAQQLKKR--------KGKDV-FPFGNYKNYYGYRIGQGLNEDPRFKVL--KKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRD----SPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFVLEPSPCVSYER 684
            + VE   +  AQ  KKR        + KD+ F +GNYK+YYG RI      D R  VL  + + F  K  LDIGCNSG ++IQIA+KF  +S++G+DID   + DA        +T  + KR A          G G+                            + F   N+V   D         +D ILCLSVTKWIHLN+ D GL   F R++  LRPGG  +LEP     Y+R
Sbjct:   44 SNVEATSRPPAQSPKKRLHLNGKPMQNKDLNFKYGNYKHYYGKRILNKDFHDIRLDVLGTQPDLFRNKQLLDIGCNSGHLSIQIARKFEVKSLVGLDIDRGLINDAQ-------KTVSHLKRHAT--------PGQGIPH--------------------------IQFVHGNYVLEDDVLLEIERPQFDVILCLSVTKWIHLNFCDSGLKQAFRRMYLQLRPGGKLILEPQSFDGYKR 241          
The following BLAST results are available for this feature:
BLAST of EY693187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
MEPCE_HUMAN3.795e-3436.657SK snRNA methylphosphate capping enzyme OS=Homo s... [more]
MEPCE_MOUSE1.884e-3337.807SK snRNA methylphosphate capping enzyme OS=Mus mu... [more]
BIN3D_CAEEL8.750e-3131.69Probable methyltransferase Y17G7B.18 OS=Caenorhabd... [more]
BN3D2_DROME2.087e-2435.56Probable methyltransferase CG1239 OS=Drosophila me... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-008-H04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693187 ID=EY693187; Name=EY693187; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGGAACAAAGTTGAACAAGAAGAAAAGGGCGAAGCTCAACA
ACTTAAGAAAAGAAAGGGCAAAGACGTTTTTCCCTTCGGCAATTACAAAA
ACTACTACGGTTATCGCATTGGTCAGGGCTTGAACGAAGATCCTCGATTT
AAAGTGTTGAAAAAGGAATGGTTTGAAGGCAAAGATTGTCTCGATATTGG
CTGCAATAGTGGCATCATTACCATTCAAATTGCACAAAAGTTTAACTGCC
GGAGTATCCTTGGGATTGACATCGACTCTAATCGTGTTGCGGATGCATAT
TGGCACCTTAGGAAAATTGTAAGAACGGAACATAATGAGAAAAGACGAGC
GAATGCTTCTAGAGTGGAGGTTATAGAGAAAGGAGATGGTTTAGAGAAGA
ACGTAACTGCTGCACAAGAAGAGAAGAAGGCAATTTCAAGGAATTGTTCT
CCTGCAGAAAGAAATCTCTTTGACATAGTTTCTTTCAAACAGGAAAATTT
TGTACATGGTCGGGACTCACCGGAGAAGTACTATGATGCGATTCTCTGTT
TGAGCGTAACAAAATGGATACATTTGAATTGGGGTGATGATGGGTTGATT
ACTTTATTTATGAGGATATGGAAACTTCTTCGTCCGGGTGGCATTTTTGT
GTTGGAACCTTCACCTTGTGTATCGTATGAAAGAATCGTCGTGTGTCTGA
GACACAGCAACCAATTTCAAATATCAGTTGTATCCAAAGAGTTCAGGAAA
TCTTCTAGAAAGATTGGATTACACTGTAGAGACTCCGGTCTGGTGGTTAT
CCGCACAAAATGGTTTCACAGACAAATTTTTATCCGCAATGATCTTATAG
AAACTGCGCTCGGCAGGCTCCGGAAAGAAGCTAATCTTTCTTTTAGGGAA
AATACTTTCGTGTCC
back to top